Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:38:56 (486867): wrapper (7.7.26015): starting
19:38:56 (486867): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 19:38:56] Arguments: --nthreads 4
[2024-06-21 19:38:56] Threads: 4
[2024-06-21 19:38:56] Checking for CVMFS
[2024-06-21 19:38:56] No cvmfs_config command found, will try listing directly
[2024-06-21 19:38:56] CVMFS is ok
[2024-06-21 19:38:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 19:38:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 19:38:56] Further information can be found at the LHC@home message board.
[2024-06-21 19:38:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 19:38:56] Checking for apptainer binary...
[2024-06-21 19:38:56] which: no apptainer in ((null))
[2024-06-21 19:38:56] apptainer is not installed, using version from CVMFS
[2024-06-21 19:38:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 19:38:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-21 19:38:57] apptainer works
[2024-06-21 19:38:57] Set ATHENA_PROC_NUMBER=4
[2024-06-21 19:38:57] Set ATHENA_CORE_NUMBER=4
[2024-06-21 19:38:57] Starting ATLAS job with PandaID=6238890894
[2024-06-21 19:38:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 05:15:18]  *** The last 200 lines of the pilot log: ***
[2024-06-22 05:15:18] 2024-06-22 03:14:57,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 05:15:18] 2024-06-22 03:14:57,503 | INFO     | fitting pss+swap vs Time
[2024-06-22 05:15:18] 2024-06-22 03:14:57,503 | INFO     | model: linear, x: [1718991598.0, 1718991659.0, 1718991720.0, 1718991781.0, 1718991842.0, 1718991903.0, 1718991964.0, 1718992025.0, 1718992086.0, 1718992147.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,504 | INFO     | sum of square deviations: 56224598377.5
[2024-06-22 05:15:18] 2024-06-22 03:14:57,509 | INFO     | sum of deviations: 298291846103.99994
[2024-06-22 05:15:18] 2024-06-22 03:14:57,510 | INFO     | mean x: 1719008830.5
[2024-06-22 05:15:18] 2024-06-22 03:14:57,510 | INFO     | mean y: 2345857.8975265017
[2024-06-22 05:15:18] 2024-06-22 03:14:57,510 | INFO     | -- intersect: -9117618220.38964
[2024-06-22 05:15:18] 2024-06-22 03:14:57,510 | INFO     | intersect: -9117618220.38964
[2024-06-22 05:15:18] 2024-06-22 03:14:57,510 | INFO     | chi2: 4.7947104579236175
[2024-06-22 05:15:18] 2024-06-22 03:14:57,511 | INFO     | model: linear, x: [1718991598.0, 1718991659.0, 1718991720.0, 1718991781.0, 1718991842.0, 1718991903.0, 1718991964.0, 1718992025.0, 1718992086.0, 1718992147.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,511 | INFO     | sum of square deviations: 54747668360.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | sum of deviations: 332212327225.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | mean x: 1719008678.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | mean y: 2349333.121212121
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | -- intersect: -10428704455.017696
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | intersect: -10428704455.017696
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | chi2: 3.9833450750656327
[2024-06-22 05:15:18] 2024-06-22 03:14:57,517 | INFO     | current chi2=3.9833450750656327 (change=16.922093418949686 %)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,518 | INFO     | right removable region: 560
[2024-06-22 05:15:18] 2024-06-22 03:14:57,518 | INFO     | model: linear, x: [1718991903.0, 1718991964.0, 1718992025.0, 1718992086.0, 1718992147.0, 1718992208.0, 1718992269.0, 1718992330.0, 1718992391.0, 1718992452.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,518 | INFO     | sum of square deviations: 54747668360.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | sum of deviations: 163956520776.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | mean x: 1719008983.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | mean y: 2359715.0499108736
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | -- intersect: -5145671981.607538
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | intersect: -5145671981.607538
[2024-06-22 05:15:18] 2024-06-22 03:14:57,524 | INFO     | chi2: 2.410058682344969
[2024-06-22 05:15:18] 2024-06-22 03:14:57,525 | INFO     | current chi2=2.410058682344969 (change=49.73505275251467 %)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,525 | INFO     | model: linear, x: [1718992208.0, 1718992269.0, 1718992330.0, 1718992391.0, 1718992452.0, 1718992513.0, 1718992574.0, 1718992635.0, 1718992696.0, 1718992757.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,525 | INFO     | sum of square deviations: 53296831855.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | sum of deviations: 52304807399.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | mean x: 1719009135.5
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | mean y: 2371451.1007194244
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | -- intersect: -1684641427.9024053
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | intersect: -1684641427.9024053
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | chi2: 0.8966254521408242
[2024-06-22 05:15:18] 2024-06-22 03:14:57,531 | INFO     | current chi2=0.8966254521408242 (change=62.79653027915426 %)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,532 | INFO     | model: linear, x: [1718992513.0, 1718992574.0, 1718992635.0, 1718992696.0, 1718992757.0, 1718992818.0, 1718992879.0, 1718992940.0, 1718993001.0, 1718993062.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,532 | INFO     | sum of square deviations: 51871856300.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | sum of deviations: 33297622747.999992
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | mean x: 1719009288.0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | mean y: 2373479.1960072597
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | -- intersect: -1101094313.4561727
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | intersect: -1101094313.4561727
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | chi2: 0.8379797567821669
[2024-06-22 05:15:18] 2024-06-22 03:14:57,538 | INFO     | current chi2=0.8379797567821669 (change=6.540712760119871 %)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,539 | INFO     | left removable region: 30
[2024-06-22 05:15:18] 2024-06-22 03:14:57,539 | INFO     | model: linear, x: [1718993428.0, 1718993489.0, 1718993550.0, 1718993611.0, 1718993672.0, 1718993733.0, 1718993794.0, 1718993855.0, 1718993916.0, 1718993977.0, 1718
[2024-06-22 05:15:18] 2024-06-22 03:14:57,539 | INFO     | sum of square deviations: 46164112072.5
[2024-06-22 05:15:18] 2024-06-22 03:14:57,544 | INFO     | sum of deviations: 59314259693.00001
[2024-06-22 05:15:18] 2024-06-22 03:14:57,544 | INFO     | mean x: 1719009562.5
[2024-06-22 05:15:18] 2024-06-22 03:14:57,544 | INFO     | mean y: 2378318.7396226414
[2024-06-22 05:15:18] 2024-06-22 03:14:57,544 | INFO     | -- intersect: -2206302299.7621694
[2024-06-22 05:15:18] 2024-06-22 03:14:57,544 | INFO     | intersect: -2206302299.7621694
[2024-06-22 05:15:18] 2024-06-22 03:14:57,545 | INFO     | chi2: 0.007187792348573431
[2024-06-22 05:15:18] 2024-06-22 03:14:57,545 | INFO     | -- intersect: -2206302299.7621694
[2024-06-22 05:15:18] 2024-06-22 03:14:57,545 | INFO     | current memory leak: 1.28 B/s (using 530 data points, chi2=0.01)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | ..............................
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . Timing measurements:
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . get job = 0 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . initial setup = 1 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . payload setup = 13 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . stage-in = 0 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . payload execution = 34494 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . stage-out = 1 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | . log creation = 0 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,546 | INFO     | ..............................
[2024-06-22 05:15:18] 2024-06-22 03:14:57,620 | INFO     | 
[2024-06-22 05:15:18] 2024-06-22 03:14:57,620 | INFO     | job summary report
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | --------------------------------------------------
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | PanDA job id: 6238890894
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | task id: 38921013
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | errors: (none)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | pilot state: finished 
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | transexitcode: 0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | exeerrorcode: 0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | exeerrordiag: 
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | exitcode: 0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | exitmsg: OK
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | cpuconsumptiontime: 133319 s
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | nevents: 400
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | neventsw: 0
[2024-06-22 05:15:18] 2024-06-22 03:14:57,621 | INFO     | pid: 501467
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | pgrp: 501467
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | corecount: 4
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | event service: False
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | sizes: {0: 2387118, 9: 2387324, 11: 2387352, 34509: 2426941, 34510: 2435925, 34513: 2435981, 34521: 2436279}
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | --------------------------------------------------
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | 
[2024-06-22 05:15:18] 2024-06-22 03:14:57,622 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/1
[2024-06-22 05:15:18] 2024-06-22 03:14:57,648 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | job 6238890894 has completed (purged errors)
[2024-06-22 05:15:18] 2024-06-22 03:14:57,650 | INFO     | overall cleanup function is called
[2024-06-22 05:15:18] 2024-06-22 03:14:58,658 | INFO     | --- collectZombieJob: --- 10, [501467]
[2024-06-22 05:15:18] 2024-06-22 03:14:58,658 | INFO     | zombie collector waiting for pid 501467
[2024-06-22 05:15:18] 2024-06-22 03:14:58,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 05:15:18] 2024-06-22 03:14:59,663 | INFO     | collected zombie processes
[2024-06-22 05:15:18] 2024-06-22 03:14:59,663 | INFO     | will now attempt to kill all subprocesses of pid=501467
[2024-06-22 05:15:18] 2024-06-22 03:14:59,845 | INFO     | process IDs to be killed: [501467] (in reverse order)
[2024-06-22 05:15:18] 2024-06-22 03:15:00,027 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 05:15:18] 2024-06-22 03:15:00,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 05:15:18] 2024-06-22 03:15:00,040 | INFO     | did not find any defunct processes belonging to 501467
[2024-06-22 05:15:18] 2024-06-22 03:15:00,050 | INFO     | did not find any defunct processes belonging to 501467
[2024-06-22 05:15:18] 2024-06-22 03:15:00,050 | INFO     | ready for new job
[2024-06-22 05:15:18] 2024-06-22 03:15:00,051 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 05:15:18] 2024-06-22 03:15:00,054 | INFO     | *************************************
[2024-06-22 05:15:18] 2024-06-22 03:15:00,055 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 05:15:18] 2024-06-22 03:15:00,055 | INFO     | *************************************
[2024-06-22 05:15:18] 2024-06-22 03:15:00,055 | INFO     | 
[2024-06-22 05:15:18] 2024-06-22 03:15:00,062 | INFO     | architecture information:
[2024-06-22 05:15:18] 2024-06-22 03:15:00,063 | INFO     | executing command: cat /etc/os-release
[2024-06-22 05:15:18] 2024-06-22 03:15:00,084 | INFO     | cat /etc/os-release:
[2024-06-22 05:15:18] NAME="CentOS Linux"
[2024-06-22 05:15:18] VERSION="7 (Core)"
[2024-06-22 05:15:18] ID="centos"
[2024-06-22 05:15:18] ID_LIKE="rhel fedora"
[2024-06-22 05:15:18] VERSION_ID="7"
[2024-06-22 05:15:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 05:15:18] ANSI_COLOR="0;31"
[2024-06-22 05:15:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 05:15:18] HOME_URL="https://www.centos.org/"
[2024-06-22 05:15:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 05:15:18] 
[2024-06-22 05:15:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 05:15:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 05:15:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 05:15:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 05:15:18] 
[2024-06-22 05:15:18] 2024-06-22 03:15:00,085 | INFO     | *************************************
[2024-06-22 05:15:18] 2024-06-22 03:15:00,587 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/1
[2024-06-22 05:15:18] 2024-06-22 03:15:00,610 | INFO     | sufficient remaining disk space (3150721318912 B)
[2024-06-22 05:15:18] 2024-06-22 03:15:00,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 05:15:18] 2024-06-22 03:15:00,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 05:15:18] 2024-06-22 03:15:00,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 05:15:18] 2024-06-22 03:15:00,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 05:15:18] 2024-06-22 03:15:00,612 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 05:15:18] 2024-06-22 03:15:00,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 05:15:18] 2024-06-22 03:15:00,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 05:15:18] 2024-06-22 03:15:00,630 | INFO     | all job control threads have been joined
[2024-06-22 05:15:18] 2024-06-22 03:15:01,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:15:18] 2024-06-22 03:15:01,342 | INFO     | aborting loop
[2024-06-22 05:15:18] 2024-06-22 03:15:01,615 | INFO     | [job] retrieve thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:01,622 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:01,636 | INFO     | [job] control thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:01,661 | INFO     | all data control threads have been joined
[2024-06-22 05:15:18] 2024-06-22 03:15:01,682 | INFO     | [payload] failed_post thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:01,750 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:01,802 | INFO     | all payload control threads have been joined
[2024-06-22 05:15:18] 2024-06-22 03:15:01,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 05:15:18] 2024-06-22 03:15:01,904 | INFO     | [data] copytool_in thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,088 | INFO     | [payload] validate_post thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,347 | INFO     | [job] job monitor thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,428 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:15:18] 2024-06-22 03:15:02,666 | INFO     | [data] control thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,807 | INFO     | [payload] control thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:02,835 | INFO     | [job] validate thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:03,635 | INFO     | [job] queue monitor thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:03,840 | INFO     | [data] copytool_out thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:04,617 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:10,783 | INFO     | job.realtimelogging is not enabled
[2024-06-22 05:15:18] 2024-06-22 03:15:11,788 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 05:15:18] 2024-06-22 03:15:12,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47996438942784)>', '<ExcThread(monitor, started 47996623419136)>']
[2024-06-22 05:15:18] 2024-06-22 03:15:12,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 05:15:18] 2024-06-22 03:15:12,672 | INFO     | [monitor] control thread has ended
[2024-06-22 05:15:18] 2024-06-22 03:15:17,492 | INFO     | all workflow threads have been joined
[2024-06-22 05:15:18] 2024-06-22 03:15:17,492 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 05:15:18] 2024-06-22 03:15:17,492 | INFO     | traces error code: 0
[2024-06-22 05:15:18] 2024-06-22 03:15:17,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 05:15:18] 2024-06-22 03:15:17,636 [wrapper] ==== pilot stdout END ====
[2024-06-22 05:15:18] 2024-06-22 03:15:17,639 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 05:15:18] 2024-06-22 03:15:17,641 [wrapper] pilotpid: 493780
[2024-06-22 05:15:18] 2024-06-22 03:15:17,644 [wrapper] Pilot exit status: 0
[2024-06-22 05:15:18] 2024-06-22 03:15:17,661 [wrapper] pandaids: 6238890894
[2024-06-22 05:15:18] 2024-06-22 03:15:17,776 [wrapper] cleanup supervisor_pilot 3493769 493781
[2024-06-22 05:15:18] 2024-06-22 03:15:17,779 [wrapper] Test setup, not cleaning
[2024-06-22 05:15:18] 2024-06-22 03:15:17,781 [wrapper] ==== wrapper stdout END ====
[2024-06-22 05:15:18] 2024-06-22 03:15:17,782 [wrapper] ==== wrapper stderr END ====
[2024-06-22 05:15:18] 2024-06-22 03:15:17,786 [wrapper] apfmon messages muted
[2024-06-22 05:15:18]  *** Error codes and diagnostics ***
[2024-06-22 05:15:18]     "exeErrorCode": 0,
[2024-06-22 05:15:18]     "exeErrorDiag": "",
[2024-06-22 05:15:18]     "pilotErrorCode": 0,
[2024-06-22 05:15:18]     "pilotErrorDiag": "",
[2024-06-22 05:15:18]  *** Listing of results directory ***
[2024-06-22 05:15:18] total 879772
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-22 05:15:18] -rwx------ 1 boinc boinc     32308 Jun 20 17:18 runpilot2-wrapper.sh
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc       100 Jun 21 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 05:15:18] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 19:38 run_atlas
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc       105 Jun 21 19:38 job.xml
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc      6644 Jun 21 19:38 init_data.xml
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc 540878499 Jun 21 19:38 EVNT.38776210._000301.pool.root.1
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:38 start_atlas.sh
[2024-06-22 05:15:18] drwxrwx--x 2 boinc boinc      4096 Jun 21 19:38 shared
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc    482534 Jun 21 19:38 input.tar.gz
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc         0 Jun 21 19:38 boinc_lockfile
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc      2644 Jun 21 19:38 pandaJob.out
[2024-06-22 05:15:18] -rw------- 1 boinc boinc       424 Jun 21 19:38 setup.sh.local
[2024-06-22 05:15:18] -rw------- 1 boinc boinc   1025624 Jun 21 19:39 agis_schedconf.cvmfs.json
[2024-06-22 05:15:18] -rw------- 1 boinc boinc   1321363 Jun 21 19:39 cric_ddmendpoints.json
[2024-06-22 05:15:18] drwx------ 4 boinc boinc      4096 Jun 21 19:39 pilot3
[2024-06-22 05:15:18] -rw------- 1 boinc boinc 347516924 Jun 22 05:14 HITS.38921013._050250.pool.root.1
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc       533 Jun 22 05:14 boinc_task_state.xml
[2024-06-22 05:15:18] -rw------- 1 boinc boinc        95 Jun 22 05:14 pilot_heartbeat.json
[2024-06-22 05:15:18] -rw------- 1 boinc boinc      1042 Jun 22 05:14 memory_monitor_summary.json
[2024-06-22 05:15:18] -rw------- 1 boinc boinc         0 Jun 22 05:14 agis_ddmendpoints.agis.ALL.json
[2024-06-22 05:15:18] -rw------- 1 boinc boinc    572758 Jun 22 05:14 log.38921013._050250.job.log.tgz.1
[2024-06-22 05:15:18] -rw------- 1 boinc boinc      7726 Jun 22 05:14 heartbeat.json
[2024-06-22 05:15:18] -rw------- 1 boinc boinc      4418 Jun 22 05:15 pilotlog.txt
[2024-06-22 05:15:18] -rw------- 1 boinc boinc   3905413 Jun 22 05:15 log.38921013._050250.job.log.1
[2024-06-22 05:15:18] -rw------- 1 boinc boinc       357 Jun 22 05:15 output.list
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc       620 Jun 22 05:15 runtime_log
[2024-06-22 05:15:18] -rw------- 1 boinc boinc   4495360 Jun 22 05:15 result.tar.gz
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc     11429 Jun 22 05:15 runtime_log.err
[2024-06-22 05:15:18] -rw------- 1 boinc boinc       662 Jun 22 05:15 5NVKDmHjYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmeRlKDmWnwtrn.diag
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc      8192 Jun 22 05:15 boinc_mmap_file
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc        29 Jun 22 05:15 wrapper_checkpoint.txt
[2024-06-22 05:15:18] -rw-r--r-- 1 boinc boinc     21321 Jun 22 05:15 stderr.txt
[2024-06-22 05:15:18] HITS file was successfully produced:
[2024-06-22 05:15:18] -rw------- 1 boinc boinc 347516924 Jun 22 05:14 shared/HITS.pool.root.1
[2024-06-22 05:15:18]  *** Contents of shared directory: ***
[2024-06-22 05:15:18] total 872468
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc 540878499 Jun 21 19:38 ATLAS.root_0
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:38 start_atlas.sh
[2024-06-22 05:15:18] -rw-r--r-- 2 boinc boinc    482534 Jun 21 19:38 input.tar.gz
[2024-06-22 05:15:18] -rw------- 1 boinc boinc 347516924 Jun 22 05:14 HITS.pool.root.1
[2024-06-22 05:15:18] -rw------- 1 boinc boinc   4495360 Jun 22 05:15 result.tar.gz
05:15:20 (486867): run_atlas exited; CPU time 132410.366147
05:15:20 (486867): called boinc_finish(0)

</stderr_txt>
]]>

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