Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:39:09 (1063759): wrapper (7.7.26015): starting
22:39:09 (1063759): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 22:39:09] Arguments: --nthreads 4
[2024-06-20 22:39:09] Threads: 4
[2024-06-20 22:39:09] Checking for CVMFS
[2024-06-20 22:39:09] No cvmfs_config command found, will try listing directly
[2024-06-20 22:39:09] CVMFS is ok
[2024-06-20 22:39:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 22:39:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 22:39:09] Further information can be found at the LHC@home message board.
[2024-06-20 22:39:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 22:39:09] Checking for apptainer binary...
[2024-06-20 22:39:09] which: no apptainer in ((null))
[2024-06-20 22:39:09] apptainer is not installed, using version from CVMFS
[2024-06-20 22:39:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 22:39:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-20 22:39:10] apptainer works
[2024-06-20 22:39:10] Set ATHENA_PROC_NUMBER=4
[2024-06-20 22:39:10] Set ATHENA_CORE_NUMBER=4
[2024-06-20 22:39:10] Starting ATLAS job with PandaID=6238888887
[2024-06-20 22:39:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 03:06:55]  *** The last 200 lines of the pilot log: ***
[2024-06-21 03:06:55] 2024-06-21 01:06:33,724 | INFO     | chi2: 5.326825180463775
[2024-06-21 03:06:55] 2024-06-21 01:06:33,724 | INFO     | model: linear, x: [1718915986.0, 1718916047.0, 1718916108.0, 1718916169.0, 1718916230.0, 1718916291.0, 1718916352.0, 1718916413.0, 1718916474.0, 1718916535.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,724 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,725 | INFO     | sum of deviations: 131766108113.00002
[2024-06-21 03:06:55] 2024-06-21 01:06:33,725 | INFO     | mean x: 1718923824.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,725 | INFO     | mean y: 2295550.7209302327
[2024-06-21 03:06:55] 2024-06-21 01:06:33,725 | INFO     | -- intersect: -42531029227.78451
[2024-06-21 03:06:55] 2024-06-21 01:06:33,725 | INFO     | intersect: -42531029227.78451
[2024-06-21 03:06:55] 2024-06-21 01:06:33,726 | INFO     | chi2: 4.5335277598467725
[2024-06-21 03:06:55] 2024-06-21 01:06:33,726 | INFO     | current chi2=4.5335277598467725 (change=14.89249963611411 %)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,726 | INFO     | right removable region: 257
[2024-06-21 03:06:55] 2024-06-21 01:06:33,726 | INFO     | model: linear, x: [1718916291.0, 1718916352.0, 1718916413.0, 1718916474.0, 1718916535.0, 1718916596.0, 1718916657.0, 1718916718.0, 1718916779.0, 1718916840.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,726 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,727 | INFO     | sum of deviations: 54821543965.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,727 | INFO     | mean x: 1718924129.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,727 | INFO     | mean y: 2319290.399224806
[2024-06-21 03:06:55] 2024-06-21 01:06:33,727 | INFO     | -- intersect: -17693755834.476883
[2024-06-21 03:06:55] 2024-06-21 01:06:33,727 | INFO     | intersect: -17693755834.476883
[2024-06-21 03:06:55] 2024-06-21 01:06:33,728 | INFO     | chi2: 2.7130051605373047
[2024-06-21 03:06:55] 2024-06-21 01:06:33,728 | INFO     | current chi2=2.7130051605373047 (change=49.0690032312812 %)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,728 | INFO     | model: linear, x: [1718916596.0, 1718916657.0, 1718916718.0, 1718916779.0, 1718916840.0, 1718916901.0, 1718916962.0, 1718917023.0, 1718917084.0, 1718917145.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,728 | INFO     | sum of square deviations: 5021496942.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | sum of deviations: 4518290435.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | mean x: 1718924282.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | mean y: 2344556.7312252964
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | -- intersect: -1544325536.1826425
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | intersect: -1544325536.1826425
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | chi2: 1.1753789183353813
[2024-06-21 03:06:55] 2024-06-21 01:06:33,729 | INFO     | current chi2=1.1753789183353813 (change=56.676126701410325 %)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,730 | INFO     | model: linear, x: [1718916901.0, 1718916962.0, 1718917023.0, 1718917084.0, 1718917145.0, 1718917206.0, 1718917267.0, 1718917328.0, 1718917389.0, 1718917450.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,730 | INFO     | sum of square deviations: 4729621702.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | sum of deviations: -10904856845.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | mean x: 1718924434.5
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | mean y: 2352522.3629032257
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | -- intersect: 3965592304.874177
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | intersect: 3965592304.874177
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | chi2: 0.8340609263980137
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | current chi2=0.8340609263980137 (change=29.038975143501457 %)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,731 | INFO     | model: linear, x: [1718917206.0, 1718917267.0, 1718917328.0, 1718917389.0, 1718917450.0, 1718917511.0, 1718917572.0, 1718917633.0, 1718917694.0, 1718917755.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,732 | INFO     | sum of square deviations: 4449281562.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,732 | INFO     | sum of deviations: -11165494473.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,732 | INFO     | mean x: 1718924587.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | mean y: 2352662.2016460905
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | -- intersect: 4316002564.59735
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | intersect: 4316002564.59735
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | chi2: 0.8341427585134485
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | current chi2=0.8341427585134485 (change=-0.009811287502495653 %)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | left removable region: 40
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | model: linear, x: [1718918426.0, 1718918487.0, 1718918548.0, 1718918609.0, 1718918670.0, 1718918731.0, 1718918792.0, 1718918853.0, 1718918914.0, 1718918975.0, 1718
[2024-06-21 03:06:55] 2024-06-21 01:06:33,733 | INFO     | sum of square deviations: 3168461268.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | sum of deviations: 4013046162.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | mean x: 1718925014.0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | mean y: 2361183.2258064514
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | -- intersect: -2174760405.687521
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | intersect: -2174760405.687521
[2024-06-21 03:06:55] 2024-06-21 01:06:33,734 | INFO     | chi2: 0.00039059207034135204
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | -- intersect: -2174760405.687521
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | current memory leak: 1.27 B/s (using 217 data points, chi2=0.00)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | ..............................
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . Timing measurements:
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . get job = 0 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . initial setup = 1 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . payload setup = 5 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . stage-in = 0 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . payload execution = 16001 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . stage-out = 1 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | . log creation = 0 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,735 | INFO     | ..............................
[2024-06-21 03:06:55] 2024-06-21 01:06:33,790 | INFO     | 
[2024-06-21 03:06:55] 2024-06-21 01:06:33,790 | INFO     | job summary report
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | --------------------------------------------------
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | PanDA job id: 6238888887
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | task id: 40024058
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | errors: (none)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | pilot state: finished 
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | transexitcode: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | exeerrorcode: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | exeerrordiag: 
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | exitcode: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | exitmsg: OK
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | cpuconsumptiontime: 60676 s
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | nevents: 400
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | neventsw: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | pid: 1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:33,791 | INFO     | pgrp: 1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | corecount: 4
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | event service: False
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | sizes: {0: 2386929, 7: 2387135, 11: 2387163, 16010: 2418517, 16012: 2427499, 16014: 2427555, 16019: 2427853}
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | --------------------------------------------------
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | 
[2024-06-21 03:06:55] 2024-06-21 01:06:33,792 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-06-21 03:06:55] 2024-06-21 01:06:33,813 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,813 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,813 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,813 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | job 6238888887 has completed (purged errors)
[2024-06-21 03:06:55] 2024-06-21 01:06:33,814 | INFO     | overall cleanup function is called
[2024-06-21 03:06:55] 2024-06-21 01:06:34,821 | INFO     | --- collectZombieJob: --- 10, [1075202]
[2024-06-21 03:06:55] 2024-06-21 01:06:34,821 | INFO     | zombie collector waiting for pid 1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:34,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 03:06:55] 2024-06-21 01:06:35,826 | INFO     | collected zombie processes
[2024-06-21 03:06:55] 2024-06-21 01:06:35,826 | INFO     | will now attempt to kill all subprocesses of pid=1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:35,961 | INFO     | process IDs to be killed: [1075202] (in reverse order)
[2024-06-21 03:06:55] 2024-06-21 01:06:36,055 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 03:06:55] 2024-06-21 01:06:36,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 03:06:55] 2024-06-21 01:06:36,061 | INFO     | did not find any defunct processes belonging to 1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:36,067 | INFO     | did not find any defunct processes belonging to 1075202
[2024-06-21 03:06:55] 2024-06-21 01:06:36,067 | INFO     | ready for new job
[2024-06-21 03:06:55] 2024-06-21 01:06:36,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 03:06:55] 2024-06-21 01:06:36,069 | INFO     | *************************************
[2024-06-21 03:06:55] 2024-06-21 01:06:36,069 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 03:06:55] 2024-06-21 01:06:36,069 | INFO     | *************************************
[2024-06-21 03:06:55] 2024-06-21 01:06:36,069 | INFO     | 
[2024-06-21 03:06:55] 2024-06-21 01:06:36,072 | INFO     | architecture information:
[2024-06-21 03:06:55] 2024-06-21 01:06:36,072 | INFO     | executing command: cat /etc/os-release
[2024-06-21 03:06:55] 2024-06-21 01:06:36,088 | INFO     | cat /etc/os-release:
[2024-06-21 03:06:55] NAME="CentOS Linux"
[2024-06-21 03:06:55] VERSION="7 (Core)"
[2024-06-21 03:06:55] ID="centos"
[2024-06-21 03:06:55] ID_LIKE="rhel fedora"
[2024-06-21 03:06:55] VERSION_ID="7"
[2024-06-21 03:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 03:06:55] ANSI_COLOR="0;31"
[2024-06-21 03:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 03:06:55] HOME_URL="https://www.centos.org/"
[2024-06-21 03:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 03:06:55] 
[2024-06-21 03:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 03:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 03:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 03:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 03:06:55] 
[2024-06-21 03:06:55] 2024-06-21 01:06:36,088 | INFO     | *************************************
[2024-06-21 03:06:55] 2024-06-21 01:06:36,591 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-06-21 03:06:55] 2024-06-21 01:06:36,610 | INFO     | sufficient remaining disk space (655068495872 B)
[2024-06-21 03:06:55] 2024-06-21 01:06:36,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 03:06:55] 2024-06-21 01:06:36,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 03:06:55] 2024-06-21 01:06:36,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 03:06:55] 2024-06-21 01:06:36,611 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 03:06:55] 2024-06-21 01:06:36,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 03:06:55] 2024-06-21 01:06:36,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 03:06:55] 2024-06-21 01:06:36,664 | INFO     | all data control threads have been joined
[2024-06-21 03:06:55] 2024-06-21 01:06:37,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 03:06:55] 2024-06-21 01:06:37,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:06:55] 2024-06-21 01:06:37,469 | INFO     | aborting loop
[2024-06-21 03:06:55] 2024-06-21 01:06:37,557 | INFO     | all payload control threads have been joined
[2024-06-21 03:06:55] 2024-06-21 01:06:37,616 | INFO     | [job] retrieve thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:37,661 | INFO     | all job control threads have been joined
[2024-06-21 03:06:55] 2024-06-21 01:06:37,669 | INFO     | [data] control thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:37,677 | INFO     | [payload] validate_post thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,156 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,275 | INFO     | [job] validate thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,301 | INFO     | [payload] failed_post thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,318 | INFO     | [data] copytool_in thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,367 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,391 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,474 | INFO     | [job] job monitor thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,562 | INFO     | [payload] control thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,666 | INFO     | [job] control thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:38,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 03:06:55] 2024-06-21 01:06:39,308 | INFO     | [data] copytool_out thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:39,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 03:06:55] 2024-06-21 01:06:39,798 | INFO     | [job] queue monitor thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:43,753 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:47,259 | INFO     | job.realtimelogging is not enabled
[2024-06-21 03:06:55] 2024-06-21 01:06:48,264 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 03:06:55] 2024-06-21 01:06:49,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47128665490496)>', '<ExcThread(monitor, started 47128852068096)>']
[2024-06-21 03:06:55] 2024-06-21 01:06:50,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 03:06:55] 2024-06-21 01:06:50,672 | INFO     | [monitor] control thread has ended
[2024-06-21 03:06:55] 2024-06-21 01:06:54,815 | INFO     | all workflow threads have been joined
[2024-06-21 03:06:55] 2024-06-21 01:06:54,815 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 03:06:55] 2024-06-21 01:06:54,815 | INFO     | traces error code: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:54,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 03:06:55] 2024-06-21 01:06:54,911 [wrapper] ==== pilot stdout END ====
[2024-06-21 03:06:55] 2024-06-21 01:06:54,913 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 03:06:55] 2024-06-21 01:06:54,915 [wrapper] pilotpid: 1068125
[2024-06-21 03:06:55] 2024-06-21 01:06:54,918 [wrapper] Pilot exit status: 0
[2024-06-21 03:06:55] 2024-06-21 01:06:54,926 [wrapper] pandaids: 6238888887
[2024-06-21 03:06:55] 2024-06-21 01:06:54,995 [wrapper] cleanup supervisor_pilot 1603507 1068126
[2024-06-21 03:06:55] 2024-06-21 01:06:54,997 [wrapper] Test setup, not cleaning
[2024-06-21 03:06:55] 2024-06-21 01:06:54,999 [wrapper] ==== wrapper stdout END ====
[2024-06-21 03:06:55] 2024-06-21 01:06:55,001 [wrapper] ==== wrapper stderr END ====
[2024-06-21 03:06:55] 2024-06-21 01:06:55,006 [wrapper] apfmon messages muted
[2024-06-21 03:06:55]  *** Error codes and diagnostics ***
[2024-06-21 03:06:55]     "exeErrorCode": 0,
[2024-06-21 03:06:55]     "exeErrorDiag": "",
[2024-06-21 03:06:55]     "pilotErrorCode": 0,
[2024-06-21 03:06:55]     "pilotErrorDiag": "",
[2024-06-21 03:06:55]  *** Listing of results directory ***
[2024-06-21 03:06:55] total 870052
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 03:06:55] -rwx------ 1 boinc boinc     32308 Jun 20 17:13 runpilot2-wrapper.sh
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:14 queuedata.json
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc       100 Jun 20 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 03:06:55] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 22:39 run_atlas
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc       105 Jun 20 22:39 job.xml
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc      6661 Jun 20 22:39 init_data.xml
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc 614192488 Jun 20 22:39 EVNT.40024055._000019.pool.root.1
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:39 start_atlas.sh
[2024-06-21 03:06:55] drwxrwx--x 2 boinc boinc      4096 Jun 20 22:39 shared
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc    482488 Jun 20 22:39 input.tar.gz
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc         0 Jun 20 22:39 boinc_lockfile
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc      2552 Jun 20 22:39 pandaJob.out
[2024-06-21 03:06:55] -rw------- 1 boinc boinc       424 Jun 20 22:39 setup.sh.local
[2024-06-21 03:06:55] -rw------- 1 boinc boinc   1024127 Jun 20 22:39 agis_schedconf.cvmfs.json
[2024-06-21 03:06:55] -rw------- 1 boinc boinc   1321251 Jun 20 22:39 cric_ddmendpoints.json
[2024-06-21 03:06:55] drwx------ 4 boinc boinc      4096 Jun 20 22:39 pilot3
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc       531 Jun 21 03:05 boinc_task_state.xml
[2024-06-21 03:06:55] -rw------- 1 boinc boinc 269283394 Jun 21 03:05 HITS.40024058._000230.pool.root.1
[2024-06-21 03:06:55] -rw------- 1 boinc boinc        95 Jun 21 03:06 pilot_heartbeat.json
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc        28 Jun 21 03:06 wrapper_checkpoint.txt
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc      8192 Jun 21 03:06 boinc_mmap_file
[2024-06-21 03:06:55] -rw------- 1 boinc boinc      1041 Jun 21 03:06 memory_monitor_summary.json
[2024-06-21 03:06:55] -rw------- 1 boinc boinc         0 Jun 21 03:06 agis_ddmendpoints.agis.ALL.json
[2024-06-21 03:06:55] -rw------- 1 boinc boinc    347055 Jun 21 03:06 log.40024058._000230.job.log.tgz.1
[2024-06-21 03:06:55] -rw------- 1 boinc boinc      7750 Jun 21 03:06 heartbeat.json
[2024-06-21 03:06:55] -rw------- 1 boinc boinc      4416 Jun 21 03:06 pilotlog.txt
[2024-06-21 03:06:55] -rw------- 1 boinc boinc   1610829 Jun 21 03:06 log.40024058._000230.job.log.1
[2024-06-21 03:06:55] -rw------- 1 boinc boinc       357 Jun 21 03:06 output.list
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc       620 Jun 21 03:06 runtime_log
[2024-06-21 03:06:55] -rw------- 1 boinc boinc   1976320 Jun 21 03:06 result.tar.gz
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc     11410 Jun 21 03:06 runtime_log.err
[2024-06-21 03:06:55] -rw------- 1 boinc boinc       657 Jun 21 03:06 muELDmreYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmFrqKDmvzL3xm.diag
[2024-06-21 03:06:55] -rw-r--r-- 1 boinc boinc     21326 Jun 21 03:06 stderr.txt
[2024-06-21 03:06:55] HITS file was successfully produced:
[2024-06-21 03:06:55] -rw------- 1 boinc boinc 269283394 Jun 21 03:05 shared/HITS.pool.root.1
[2024-06-21 03:06:55]  *** Contents of shared directory: ***
[2024-06-21 03:06:55] total 865208
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc 614192488 Jun 20 22:39 ATLAS.root_0
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:39 start_atlas.sh
[2024-06-21 03:06:55] -rw-r--r-- 2 boinc boinc    482488 Jun 20 22:39 input.tar.gz
[2024-06-21 03:06:55] -rw------- 1 boinc boinc 269283394 Jun 21 03:05 HITS.pool.root.1
[2024-06-21 03:06:55] -rw------- 1 boinc boinc   1976320 Jun 21 03:06 result.tar.gz
03:06:57 (1063759): run_atlas exited; CPU time 60405.183240
03:06:57 (1063759): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN