Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:10:38 (2451088): wrapper (7.7.26015): starting
08:10:38 (2451088): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 08:10:38] Arguments: --nthreads 4
[2024-06-21 08:10:38] Threads: 4
[2024-06-21 08:10:38] Checking for CVMFS
[2024-06-21 08:10:38] No cvmfs_config command found, will try listing directly
[2024-06-21 08:10:38] CVMFS is ok
[2024-06-21 08:10:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 08:10:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 08:10:38] Further information can be found at the LHC@home message board.
[2024-06-21 08:10:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 08:10:38] Checking for apptainer binary...
[2024-06-21 08:10:38] which: no apptainer in ((null))
[2024-06-21 08:10:38] apptainer is not installed, using version from CVMFS
[2024-06-21 08:10:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 08:10:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 08:10:40] apptainer works
[2024-06-21 08:10:40] Set ATHENA_PROC_NUMBER=4
[2024-06-21 08:10:40] Set ATHENA_CORE_NUMBER=4
[2024-06-21 08:10:40] Starting ATLAS job with PandaID=6238890007
[2024-06-21 08:10:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 18:59:09]  *** The last 200 lines of the pilot log: ***
[2024-06-21 18:59:09] 2024-06-21 16:58:46,639 | INFO     | intersect: -7536385078.190577
[2024-06-21 18:59:09] 2024-06-21 16:58:46,639 | INFO     | chi2: 5.102276103415067
[2024-06-21 18:59:09] 2024-06-21 16:58:46,640 | INFO     | model: linear, x: [1718950292.0, 1718950353.0, 1718950414.0, 1718950475.0, 1718950536.0, 1718950597.0, 1718950658.0, 1718950719.0, 1718950780.0, 1718950841.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,640 | INFO     | sum of square deviations: 78275990438.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,645 | INFO     | sum of deviations: 389498879848.49994
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | mean x: 1718969537.5
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | mean y: 2355969.640822785
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | -- intersect: -8551182677.439771
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | intersect: -8551182677.439771
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | chi2: 4.308980080412041
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | current chi2=4.308980080412041 (change=15.54788504040493 %)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,646 | INFO     | right removable region: 631
[2024-06-21 18:59:09] 2024-06-21 16:58:46,647 | INFO     | model: linear, x: [1718950597.0, 1718950658.0, 1718950719.0, 1718950780.0, 1718950841.0, 1718950902.0, 1718950963.0, 1718951024.0, 1718951085.0, 1718951146.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,647 | INFO     | sum of square deviations: 78275990438.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,652 | INFO     | sum of deviations: 202596182076.49997
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | mean x: 1718969842.5
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | mean y: 2365012.5079113925
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | -- intersect: -4446722443.894009
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | intersect: -4446722443.894009
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | chi2: 2.7794391119933093
[2024-06-21 18:59:09] 2024-06-21 16:58:46,653 | INFO     | current chi2=2.7794391119933093 (change=45.52550556538936 %)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,654 | INFO     | model: linear, x: [1718950902.0, 1718950963.0, 1718951024.0, 1718951085.0, 1718951146.0, 1718951207.0, 1718951268.0, 1718951329.0, 1718951390.0, 1718951451.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,654 | INFO     | sum of square deviations: 76432830298.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | sum of deviations: 73763976292.99997
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | mean x: 1718969995.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | mean y: 2375671.696969697
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | -- intersect: -1656571948.9156897
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | intersect: -1656571948.9156897
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | chi2: 1.1872797245839148
[2024-06-21 18:59:09] 2024-06-21 16:58:46,660 | INFO     | current chi2=1.1872797245839148 (change=57.28347782612722 %)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,661 | INFO     | model: linear, x: [1718951207.0, 1718951268.0, 1718951329.0, 1718951390.0, 1718951451.0, 1718951512.0, 1718951573.0, 1718951634.0, 1718951695.0, 1718951756.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,661 | INFO     | sum of square deviations: 74618833495.5
[2024-06-21 18:59:09] 2024-06-21 16:58:46,666 | INFO     | sum of deviations: 28477136666.000008
[2024-06-21 18:59:09] 2024-06-21 16:58:46,666 | INFO     | mean x: 1718970147.5
[2024-06-21 18:59:09] 2024-06-21 16:58:46,666 | INFO     | mean y: 2379465.2122186497
[2024-06-21 18:59:09] 2024-06-21 16:58:46,666 | INFO     | -- intersect: -653639203.5610445
[2024-06-21 18:59:09] 2024-06-21 16:58:46,667 | INFO     | intersect: -653639203.5610445
[2024-06-21 18:59:09] 2024-06-21 16:58:46,667 | INFO     | chi2: 0.8211684224369786
[2024-06-21 18:59:09] 2024-06-21 16:58:46,667 | INFO     | current chi2=0.8211684224369786 (change=30.836145397432844 %)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,667 | INFO     | model: linear, x: [1718951512.0, 1718951573.0, 1718951634.0, 1718951695.0, 1718951756.0, 1718951817.0, 1718951878.0, 1718951939.0, 1718952000.0, 1718952061.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,668 | INFO     | sum of square deviations: 72833767468.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,673 | INFO     | sum of deviations: 21039022609.999977
[2024-06-21 18:59:09] 2024-06-21 16:58:46,673 | INFO     | mean x: 1718970300.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,673 | INFO     | mean y: 2380099.1004862236
[2024-06-21 18:59:09] 2024-06-21 16:58:46,673 | INFO     | -- intersect: -494167810.8165447
[2024-06-21 18:59:09] 2024-06-21 16:58:46,673 | INFO     | intersect: -494167810.8165447
[2024-06-21 18:59:09] 2024-06-21 16:58:46,674 | INFO     | chi2: 0.8144866332118725
[2024-06-21 18:59:09] 2024-06-21 16:58:46,674 | INFO     | current chi2=0.8144866332118725 (change=0.8136929090961111 %)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,674 | INFO     | left removable region: 40
[2024-06-21 18:59:09] 2024-06-21 16:58:46,674 | INFO     | model: linear, x: [1718952732.0, 1718952793.0, 1718952854.0, 1718952915.0, 1718952976.0, 1718953037.0, 1718953098.0, 1718953159.0, 1718953220.0, 1718953281.0, 1718
[2024-06-21 18:59:09] 2024-06-21 16:58:46,674 | INFO     | sum of square deviations: 64008790840.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,679 | INFO     | sum of deviations: 53725521189.00001
[2024-06-21 18:59:09] 2024-06-21 16:58:46,679 | INFO     | mean x: 1718970727.0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | mean y: 2384060.978003384
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | -- intersect: -1440427106.1249502
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | intersect: -1440427106.1249502
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | chi2: 0.003689374497433247
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | -- intersect: -1440427106.1249502
[2024-06-21 18:59:09] 2024-06-21 16:58:46,680 | INFO     | current memory leak: 0.84 B/s (using 591 data points, chi2=0.00)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | ..............................
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . Timing measurements:
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . get job = 0 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . initial setup = 1 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . payload setup = 9 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . stage-in = 0 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . payload execution = 38829 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,681 | INFO     | . stage-out = 1 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,682 | INFO     | . log creation = 0 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,682 | INFO     | ..............................
[2024-06-21 18:59:09] 2024-06-21 16:58:46,740 | INFO     | 
[2024-06-21 18:59:09] 2024-06-21 16:58:46,740 | INFO     | job summary report
[2024-06-21 18:59:09] 2024-06-21 16:58:46,740 | INFO     | --------------------------------------------------
[2024-06-21 18:59:09] 2024-06-21 16:58:46,740 | INFO     | PanDA job id: 6238890007
[2024-06-21 18:59:09] 2024-06-21 16:58:46,740 | INFO     | task id: 38921007
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | errors: (none)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | pilot state: finished 
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | transexitcode: 0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | exeerrorcode: 0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | exeerrordiag: 
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | exitcode: 0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | exitmsg: OK
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | cpuconsumptiontime: 151039 s
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | nevents: 400
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | neventsw: 0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | pid: 2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | pgrp: 2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | corecount: 4
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | event service: False
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | sizes: {0: 2386220, 1: 2387155, 9: 2387361, 12: 2387389, 38842: 2429001, 38844: 2438167, 38851: 2438281}
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | --------------------------------------------------
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | 
[2024-06-21 18:59:09] 2024-06-21 16:58:46,741 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | job 6238890007 has completed (purged errors)
[2024-06-21 18:59:09] 2024-06-21 16:58:46,763 | INFO     | overall cleanup function is called
[2024-06-21 18:59:09] 2024-06-21 16:58:47,770 | INFO     | --- collectZombieJob: --- 10, [2462677]
[2024-06-21 18:59:09] 2024-06-21 16:58:47,770 | INFO     | zombie collector waiting for pid 2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:47,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 18:59:09] 2024-06-21 16:58:48,776 | INFO     | collected zombie processes
[2024-06-21 18:59:09] 2024-06-21 16:58:48,776 | INFO     | will now attempt to kill all subprocesses of pid=2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:49,039 | INFO     | process IDs to be killed: [2462677] (in reverse order)
[2024-06-21 18:59:09] 2024-06-21 16:58:49,178 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 18:59:09] 2024-06-21 16:58:49,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 18:59:09] 2024-06-21 16:58:49,188 | INFO     | did not find any defunct processes belonging to 2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:49,198 | INFO     | did not find any defunct processes belonging to 2462677
[2024-06-21 18:59:09] 2024-06-21 16:58:49,198 | INFO     | ready for new job
[2024-06-21 18:59:09] 2024-06-21 16:58:49,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 18:59:09] 2024-06-21 16:58:49,202 | INFO     | *************************************
[2024-06-21 18:59:09] 2024-06-21 16:58:49,202 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 18:59:09] 2024-06-21 16:58:49,202 | INFO     | *************************************
[2024-06-21 18:59:09] 2024-06-21 16:58:49,203 | INFO     | 
[2024-06-21 18:59:09] 2024-06-21 16:58:49,205 | INFO     | architecture information:
[2024-06-21 18:59:09] 2024-06-21 16:58:49,206 | INFO     | executing command: cat /etc/os-release
[2024-06-21 18:59:09] 2024-06-21 16:58:49,230 | INFO     | cat /etc/os-release:
[2024-06-21 18:59:09] NAME="CentOS Linux"
[2024-06-21 18:59:09] VERSION="7 (Core)"
[2024-06-21 18:59:09] ID="centos"
[2024-06-21 18:59:09] ID_LIKE="rhel fedora"
[2024-06-21 18:59:09] VERSION_ID="7"
[2024-06-21 18:59:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 18:59:09] ANSI_COLOR="0;31"
[2024-06-21 18:59:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 18:59:09] HOME_URL="https://www.centos.org/"
[2024-06-21 18:59:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 18:59:09] 
[2024-06-21 18:59:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 18:59:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 18:59:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 18:59:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 18:59:09] 
[2024-06-21 18:59:09] 2024-06-21 16:58:49,230 | INFO     | *************************************
[2024-06-21 18:59:09] 2024-06-21 16:58:49,733 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-06-21 18:59:09] 2024-06-21 16:58:49,757 | INFO     | sufficient remaining disk space (662674866176 B)
[2024-06-21 18:59:09] 2024-06-21 16:58:49,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 18:59:09] 2024-06-21 16:58:49,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 18:59:09] 2024-06-21 16:58:49,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:59:09] 2024-06-21 16:58:49,758 | INFO     | aborting loop
[2024-06-21 18:59:09] 2024-06-21 16:58:49,958 | INFO     | all data control threads have been joined
[2024-06-21 18:59:09] 2024-06-21 16:58:50,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 18:59:09] 2024-06-21 16:58:50,096 | INFO     | all payload control threads have been joined
[2024-06-21 18:59:09] 2024-06-21 16:58:50,151 | INFO     | all job control threads have been joined
[2024-06-21 18:59:09] 2024-06-21 16:58:50,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 18:59:09] 2024-06-21 16:58:50,188 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 18:59:09] 2024-06-21 16:58:50,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 18:59:09] 2024-06-21 16:58:50,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 18:59:09] 2024-06-21 16:58:50,763 | INFO     | [job] job monitor thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,763 | INFO     | [job] retrieve thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,796 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,892 | INFO     | [data] copytool_in thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,926 | INFO     | [job] validate thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,930 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:50,963 | INFO     | [data] control thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,101 | INFO     | [payload] control thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,156 | INFO     | [job] control thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,251 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,674 | INFO     | [payload] validate_post thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,745 | INFO     | [payload] failed_post thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:51,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:59:09] 2024-06-21 16:58:52,073 | INFO     | [data] copytool_out thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:52,756 | INFO     | [job] queue monitor thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:58:54,189 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:59:00,449 | INFO     | job.realtimelogging is not enabled
[2024-06-21 18:59:09] 2024-06-21 16:59:01,454 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 18:59:09] 2024-06-21 16:59:02,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47870058792000)>', '<ExcThread(monitor, started 47870310901504)>']
[2024-06-21 18:59:09] 2024-06-21 16:59:03,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 18:59:09] 2024-06-21 16:59:03,248 | INFO     | [monitor] control thread has ended
[2024-06-21 18:59:09] 2024-06-21 16:59:07,838 | INFO     | all workflow threads have been joined
[2024-06-21 18:59:09] 2024-06-21 16:59:07,838 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 18:59:09] 2024-06-21 16:59:07,838 | INFO     | traces error code: 0
[2024-06-21 18:59:09] 2024-06-21 16:59:07,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 18:59:09] 2024-06-21 16:59:08,013 [wrapper] ==== pilot stdout END ====
[2024-06-21 18:59:09] 2024-06-21 16:59:08,028 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 18:59:09] 2024-06-21 16:59:08,031 [wrapper] pilotpid: 2455622
[2024-06-21 18:59:09] 2024-06-21 16:59:08,034 [wrapper] Pilot exit status: 0
[2024-06-21 18:59:09] 2024-06-21 16:59:08,073 [wrapper] pandaids: 6238890007
[2024-06-21 18:59:09] 2024-06-21 16:59:08,162 [wrapper] cleanup supervisor_pilot 3890816 2455623
[2024-06-21 18:59:09] 2024-06-21 16:59:08,165 [wrapper] Test setup, not cleaning
[2024-06-21 18:59:09] 2024-06-21 16:59:08,167 [wrapper] ==== wrapper stdout END ====
[2024-06-21 18:59:09] 2024-06-21 16:59:08,170 [wrapper] ==== wrapper stderr END ====
[2024-06-21 18:59:09] 2024-06-21 16:59:08,174 [wrapper] apfmon messages muted
[2024-06-21 18:59:09]  *** Error codes and diagnostics ***
[2024-06-21 18:59:09]     "exeErrorCode": 0,
[2024-06-21 18:59:09]     "exeErrorDiag": "",
[2024-06-21 18:59:09]     "pilotErrorCode": 0,
[2024-06-21 18:59:09]     "pilotErrorDiag": "",
[2024-06-21 18:59:09]  *** Listing of results directory ***
[2024-06-21 18:59:09] total 923412
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-21 18:59:09] -rwx------ 1 boinc boinc     32308 Jun 20 17:17 runpilot2-wrapper.sh
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc       100 Jun 21 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 18:59:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 08:10 run_atlas
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc       105 Jun 21 08:10 job.xml
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc 580183114 Jun 21 08:10 EVNT.38776201._000983.pool.root.1
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 08:10 start_atlas.sh
[2024-06-21 18:59:09] drwxrwx--x 2 boinc boinc      4096 Jun 21 08:10 shared
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc    482537 Jun 21 08:10 input.tar.gz
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc      6661 Jun 21 08:10 init_data.xml
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc         0 Jun 21 08:10 boinc_lockfile
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc      2630 Jun 21 08:10 pandaJob.out
[2024-06-21 18:59:09] -rw------- 1 boinc boinc       424 Jun 21 08:10 setup.sh.local
[2024-06-21 18:59:09] -rw------- 1 boinc boinc   1024115 Jun 21 08:10 agis_schedconf.cvmfs.json
[2024-06-21 18:59:09] -rw------- 1 boinc boinc   1321251 Jun 21 08:10 cric_ddmendpoints.json
[2024-06-21 18:59:09] drwx------ 4 boinc boinc      4096 Jun 21 08:10 pilot3
[2024-06-21 18:59:09] -rw------- 1 boinc boinc 351036413 Jun 21 18:57 HITS.38921007._051278.pool.root.1
[2024-06-21 18:59:09] -rw------- 1 boinc boinc        95 Jun 21 18:58 pilot_heartbeat.json
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc       533 Jun 21 18:58 boinc_task_state.xml
[2024-06-21 18:59:09] -rw------- 1 boinc boinc      1046 Jun 21 18:58 memory_monitor_summary.json
[2024-06-21 18:59:09] -rw------- 1 boinc boinc         0 Jun 21 18:58 agis_ddmendpoints.agis.ALL.json
[2024-06-21 18:59:09] -rw------- 1 boinc boinc    619753 Jun 21 18:58 log.38921007._051278.job.log.tgz.1
[2024-06-21 18:59:09] -rw------- 1 boinc boinc      7765 Jun 21 18:58 heartbeat.json
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc      8192 Jun 21 18:59 boinc_mmap_file
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc        29 Jun 21 18:59 wrapper_checkpoint.txt
[2024-06-21 18:59:09] -rw------- 1 boinc boinc      4293 Jun 21 18:59 pilotlog.txt
[2024-06-21 18:59:09] -rw------- 1 boinc boinc   4786565 Jun 21 18:59 log.38921007._051278.job.log.1
[2024-06-21 18:59:09] -rw------- 1 boinc boinc       357 Jun 21 18:59 output.list
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc       620 Jun 21 18:59 runtime_log
[2024-06-21 18:59:09] -rw------- 1 boinc boinc   5427200 Jun 21 18:59 result.tar.gz
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc     11410 Jun 21 18:59 runtime_log.err
[2024-06-21 18:59:09] -rw------- 1 boinc boinc       661 Jun 21 18:59 R38KDm4iYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmUQlKDmU2OKGn.diag
[2024-06-21 18:59:09] -rw-r--r-- 1 boinc boinc     21294 Jun 21 18:59 stderr.txt
[2024-06-21 18:59:09] HITS file was successfully produced:
[2024-06-21 18:59:09] -rw------- 1 boinc boinc 351036413 Jun 21 18:57 shared/HITS.pool.root.1
[2024-06-21 18:59:09]  *** Contents of shared directory: ***
[2024-06-21 18:59:09] total 915200
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc 580183114 Jun 21 08:10 ATLAS.root_0
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 08:10 start_atlas.sh
[2024-06-21 18:59:09] -rw-r--r-- 2 boinc boinc    482537 Jun 21 08:10 input.tar.gz
[2024-06-21 18:59:09] -rw------- 1 boinc boinc 351036413 Jun 21 18:57 HITS.pool.root.1
[2024-06-21 18:59:09] -rw------- 1 boinc boinc   5427200 Jun 21 18:59 result.tar.gz
18:59:10 (2451088): run_atlas exited; CPU time 150449.230105
18:59:10 (2451088): called boinc_finish(0)

</stderr_txt>
]]>

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