Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:20 (3897454): wrapper (7.7.26015): starting
18:59:20 (3897454): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 18:59:20] Arguments: --nthreads 4
[2024-06-21 18:59:20] Threads: 4
[2024-06-21 18:59:20] Checking for CVMFS
[2024-06-21 18:59:20] No cvmfs_config command found, will try listing directly
[2024-06-21 18:59:20] CVMFS is ok
[2024-06-21 18:59:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 18:59:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 18:59:20] Further information can be found at the LHC@home message board.
[2024-06-21 18:59:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 18:59:20] Checking for apptainer binary...
[2024-06-21 18:59:20] which: no apptainer in ((null))
[2024-06-21 18:59:20] apptainer is not installed, using version from CVMFS
[2024-06-21 18:59:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 18:59:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 18:59:22] apptainer works
[2024-06-21 18:59:22] Set ATHENA_PROC_NUMBER=4
[2024-06-21 18:59:22] Set ATHENA_CORE_NUMBER=4
[2024-06-21 18:59:22] Starting ATLAS job with PandaID=6238889278
[2024-06-21 18:59:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 23:30:44]  *** The last 200 lines of the pilot log: ***
[2024-06-21 23:30:44] 2024-06-21 21:30:27,707 | WARNING  | GPU info not found in prmon json
[2024-06-21 23:30:44] 2024-06-21 21:30:27,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 23:30:44] 2024-06-21 21:30:27,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 23:30:44] 2024-06-21 21:30:27,710 | INFO     | fitting pss+swap vs Time
[2024-06-21 23:30:44] 2024-06-21 21:30:27,710 | INFO     | model: linear, x: [1718989216.0, 1718989277.0, 1718989338.0, 1718989399.0, 1718989460.0, 1718989521.0, 1718989582.0, 1718989643.0, 1718989704.0, 1718989765.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,711 | INFO     | sum of square deviations: 5836025702.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | sum of deviations: 115913524340.50002
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | mean x: 1718997298.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | mean y: 2300764.763157895
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | -- intersect: -34139946949.392372
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | intersect: -34139946949.392372
[2024-06-21 23:30:44] 2024-06-21 21:30:27,712 | INFO     | chi2: 4.813468020804804
[2024-06-21 23:30:44] 2024-06-21 21:30:27,713 | INFO     | model: linear, x: [1718989216.0, 1718989277.0, 1718989338.0, 1718989399.0, 1718989460.0, 1718989521.0, 1718989582.0, 1718989643.0, 1718989704.0, 1718989765.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,713 | INFO     | sum of square deviations: 5513070810.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | sum of deviations: 130730371361.99998
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | mean x: 1718997146.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | mean y: 2307635.425287356
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | -- intersect: -40759935951.0666
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | intersect: -40759935951.0666
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | chi2: 3.9832040268686932
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | current chi2=3.9832040268686932 (change=17.248769293730394 %)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,714 | INFO     | right removable region: 260
[2024-06-21 23:30:44] 2024-06-21 21:30:27,715 | INFO     | model: linear, x: [1718989521.0, 1718989582.0, 1718989643.0, 1718989704.0, 1718989765.0, 1718989826.0, 1718989887.0, 1718989948.0, 1718990009.0, 1718990070.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,715 | INFO     | sum of square deviations: 5513070810.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | sum of deviations: 55180455918.00001
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | mean x: 1718997451.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | mean y: 2329385.0038314178
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | -- intersect: -17203156692.919388
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | intersect: -17203156692.919388
[2024-06-21 23:30:44] 2024-06-21 21:30:27,716 | INFO     | chi2: 2.4593758211359864
[2024-06-21 23:30:44] 2024-06-21 21:30:27,717 | INFO     | current chi2=2.4593758211359864 (change=48.90636417431142 %)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,717 | INFO     | model: linear, x: [1718989826.0, 1718989887.0, 1718989948.0, 1718990009.0, 1718990070.0, 1718990131.0, 1718990192.0, 1718990253.0, 1718990314.0, 1718990375.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,717 | INFO     | sum of square deviations: 5202255680.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,718 | INFO     | sum of deviations: 4233744436.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,718 | INFO     | mean x: 1718997603.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,718 | INFO     | mean y: 2354381.99609375
[2024-06-21 23:30:44] 2024-06-21 21:30:27,718 | INFO     | -- intersect: -1396615024.3240044
[2024-06-21 23:30:44] 2024-06-21 21:30:27,718 | INFO     | intersect: -1396615024.3240044
[2024-06-21 23:30:44] 2024-06-21 21:30:27,719 | INFO     | chi2: 0.9538947541781163
[2024-06-21 23:30:44] 2024-06-21 21:30:27,719 | INFO     | current chi2=0.9538947541781163 (change=61.21394924759762 %)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,719 | INFO     | model: linear, x: [1718990131.0, 1718990192.0, 1718990253.0, 1718990314.0, 1718990375.0, 1718990436.0, 1718990497.0, 1718990558.0, 1718990619.0, 1718990680.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,719 | INFO     | sum of square deviations: 4903347750.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,720 | INFO     | sum of deviations: -4173295480.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,720 | INFO     | mean x: 1718997756.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,720 | INFO     | mean y: 2358622.270916335
[2024-06-21 23:30:44] 2024-06-21 21:30:27,720 | INFO     | -- intersect: 1465417318.2903743
[2024-06-21 23:30:44] 2024-06-21 21:30:27,720 | INFO     | intersect: 1465417318.2903743
[2024-06-21 23:30:44] 2024-06-21 21:30:27,721 | INFO     | chi2: 0.8682075734066377
[2024-06-21 23:30:44] 2024-06-21 21:30:27,721 | INFO     | current chi2=0.8682075734066377 (change=8.982875772842196 %)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,721 | INFO     | left removable region: 30
[2024-06-21 23:30:44] 2024-06-21 21:30:27,721 | INFO     | model: linear, x: [1718991046.0, 1718991107.0, 1718991168.0, 1718991229.0, 1718991290.0, 1718991351.0, 1718991412.0, 1718991473.0, 1718991534.0, 1718991595.0, 1718
[2024-06-21 23:30:44] 2024-06-21 21:30:27,721 | INFO     | sum of square deviations: 3772712597.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | sum of deviations: 6779174488.0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | mean x: 1718998030.5
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | mean y: 2369969.191304348
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | -- intersect: -3086491769.4447107
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | intersect: -3086491769.4447107
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | chi2: 0.00012004107889020132
[2024-06-21 23:30:44] 2024-06-21 21:30:27,722 | INFO     | -- intersect: -3086491769.4447107
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | current memory leak: 1.80 B/s (using 230 data points, chi2=0.00)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | ..............................
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . Timing measurements:
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . get job = 0 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . initial setup = 1 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . payload setup = 9 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . stage-in = 0 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . payload execution = 16205 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . stage-out = 1 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | . log creation = 0 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,723 | INFO     | ..............................
[2024-06-21 23:30:44] 2024-06-21 21:30:27,783 | INFO     | 
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | job summary report
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | --------------------------------------------------
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | PanDA job id: 6238889278
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | task id: 40024058
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | errors: (none)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | pilot state: finished 
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | transexitcode: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,784 | INFO     | exeerrorcode: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | exeerrordiag: 
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | exitcode: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | exitmsg: OK
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | cpuconsumptiontime: 61655 s
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | nevents: 400
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | neventsw: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | pid: 3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | pgrp: 3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | corecount: 4
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | event service: False
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | sizes: {0: 2386951, 6: 2387157, 11: 2387185, 16219: 2418568, 16222: 2427550, 16225: 2427606, 16232: 2427904}
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | --------------------------------------------------
[2024-06-21 23:30:44] 2024-06-21 21:30:27,785 | INFO     | 
[2024-06-21 23:30:44] 2024-06-21 21:30:27,786 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | job 6238889278 has completed (purged errors)
[2024-06-21 23:30:44] 2024-06-21 21:30:27,812 | INFO     | overall cleanup function is called
[2024-06-21 23:30:44] 2024-06-21 21:30:28,819 | INFO     | --- collectZombieJob: --- 10, [3909191]
[2024-06-21 23:30:44] 2024-06-21 21:30:28,819 | INFO     | zombie collector waiting for pid 3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:28,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 23:30:44] 2024-06-21 21:30:29,824 | INFO     | collected zombie processes
[2024-06-21 23:30:44] 2024-06-21 21:30:29,824 | INFO     | will now attempt to kill all subprocesses of pid=3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:30,018 | INFO     | process IDs to be killed: [3909191] (in reverse order)
[2024-06-21 23:30:44] 2024-06-21 21:30:30,178 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 23:30:44] 2024-06-21 21:30:30,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 23:30:44] 2024-06-21 21:30:30,188 | INFO     | did not find any defunct processes belonging to 3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:30,197 | INFO     | did not find any defunct processes belonging to 3909191
[2024-06-21 23:30:44] 2024-06-21 21:30:30,198 | INFO     | ready for new job
[2024-06-21 23:30:44] 2024-06-21 21:30:30,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 23:30:44] 2024-06-21 21:30:30,200 | INFO     | *************************************
[2024-06-21 23:30:44] 2024-06-21 21:30:30,201 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 23:30:44] 2024-06-21 21:30:30,201 | INFO     | *************************************
[2024-06-21 23:30:44] 2024-06-21 21:30:30,201 | INFO     | 
[2024-06-21 23:30:44] 2024-06-21 21:30:30,205 | INFO     | architecture information:
[2024-06-21 23:30:44] 2024-06-21 21:30:30,206 | INFO     | executing command: cat /etc/os-release
[2024-06-21 23:30:44] 2024-06-21 21:30:30,227 | INFO     | cat /etc/os-release:
[2024-06-21 23:30:44] NAME="CentOS Linux"
[2024-06-21 23:30:44] VERSION="7 (Core)"
[2024-06-21 23:30:44] ID="centos"
[2024-06-21 23:30:44] ID_LIKE="rhel fedora"
[2024-06-21 23:30:44] VERSION_ID="7"
[2024-06-21 23:30:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 23:30:44] ANSI_COLOR="0;31"
[2024-06-21 23:30:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 23:30:44] HOME_URL="https://www.centos.org/"
[2024-06-21 23:30:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 23:30:44] 
[2024-06-21 23:30:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 23:30:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 23:30:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 23:30:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 23:30:44] 
[2024-06-21 23:30:44] 2024-06-21 21:30:30,228 | INFO     | *************************************
[2024-06-21 23:30:44] 2024-06-21 21:30:30,730 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-06-21 23:30:44] 2024-06-21 21:30:30,752 | INFO     | sufficient remaining disk space (664328470528 B)
[2024-06-21 23:30:44] 2024-06-21 21:30:30,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 23:30:44] 2024-06-21 21:30:30,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 23:30:44] 2024-06-21 21:30:30,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 23:30:44] 2024-06-21 21:30:30,753 | INFO     | aborting loop
[2024-06-21 23:30:44] 2024-06-21 21:30:30,802 | INFO     | all payload control threads have been joined
[2024-06-21 23:30:44] 2024-06-21 21:30:30,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 23:30:44] 2024-06-21 21:30:31,450 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 23:30:44] 2024-06-21 21:30:31,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 23:30:44] 2024-06-21 21:30:31,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 23:30:44] 2024-06-21 21:30:31,587 | INFO     | all job control threads have been joined
[2024-06-21 23:30:44] 2024-06-21 21:30:31,709 | INFO     | all data control threads have been joined
[2024-06-21 23:30:44] 2024-06-21 21:30:31,758 | INFO     | [job] job monitor thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:31,758 | INFO     | [job] retrieve thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:31,807 | INFO     | [payload] control thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:31,850 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:31,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 23:30:44] 2024-06-21 21:30:31,971 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:31,995 | INFO     | [data] copytool_in thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,224 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,355 | INFO     | [payload] validate_post thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,592 | INFO     | [job] control thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,631 | INFO     | [job] validate thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,714 | INFO     | [data] control thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:32,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 23:30:44] 2024-06-21 21:30:32,991 | INFO     | [data] copytool_out thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:33,002 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:33,298 | INFO     | [payload] failed_post thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:33,798 | INFO     | [job] queue monitor thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:35,958 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 23:30:44] 2024-06-21 21:30:38,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46936885642304)>', '<ExcThread(monitor, started 46937070118656)>']
[2024-06-21 23:30:44] 2024-06-21 21:30:38,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 23:30:44] 2024-06-21 21:30:38,485 | INFO     | [monitor] control thread has ended
[2024-06-21 23:30:44] 2024-06-21 21:30:43,065 | INFO     | all workflow threads have been joined
[2024-06-21 23:30:44] 2024-06-21 21:30:43,065 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 23:30:44] 2024-06-21 21:30:43,065 | INFO     | traces error code: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:43,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 23:30:44] 2024-06-21 21:30:43,195 [wrapper] ==== pilot stdout END ====
[2024-06-21 23:30:44] 2024-06-21 21:30:43,198 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 23:30:44] 2024-06-21 21:30:43,201 [wrapper] pilotpid: 3901830
[2024-06-21 23:30:44] 2024-06-21 21:30:43,206 [wrapper] Pilot exit status: 0
[2024-06-21 23:30:44] 2024-06-21 21:30:43,233 [wrapper] pandaids: 6238889278
[2024-06-21 23:30:44] 2024-06-21 21:30:43,319 [wrapper] cleanup supervisor_pilot  310569 3901831
[2024-06-21 23:30:44] 2024-06-21 21:30:43,321 [wrapper] Test setup, not cleaning
[2024-06-21 23:30:44] 2024-06-21 21:30:43,324 [wrapper] ==== wrapper stdout END ====
[2024-06-21 23:30:44] 2024-06-21 21:30:43,326 [wrapper] ==== wrapper stderr END ====
[2024-06-21 23:30:44] 2024-06-21 21:30:43,330 [wrapper] apfmon messages muted
[2024-06-21 23:30:44]  *** Error codes and diagnostics ***
[2024-06-21 23:30:44]     "exeErrorCode": 0,
[2024-06-21 23:30:44]     "exeErrorDiag": "",
[2024-06-21 23:30:44]     "pilotErrorCode": 0,
[2024-06-21 23:30:44]     "pilotErrorDiag": "",
[2024-06-21 23:30:44]  *** Listing of results directory ***
[2024-06-21 23:30:44] total 863784
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 23:30:44] -rwx------ 1 boinc boinc     32308 Jun 20 17:15 runpilot2-wrapper.sh
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc       100 Jun 21 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 23:30:44] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 18:59 run_atlas
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc       105 Jun 21 18:59 job.xml
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc      6661 Jun 21 18:59 init_data.xml
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc 608106788 Jun 21 18:59 EVNT.40024055._000030.pool.root.1
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:59 start_atlas.sh
[2024-06-21 23:30:44] drwxrwx--x 2 boinc boinc      4096 Jun 21 18:59 shared
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc    482498 Jun 21 18:59 input.tar.gz
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc         0 Jun 21 18:59 boinc_lockfile
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc      2553 Jun 21 18:59 pandaJob.out
[2024-06-21 23:30:44] -rw------- 1 boinc boinc       424 Jun 21 18:59 setup.sh.local
[2024-06-21 23:30:44] -rw------- 1 boinc boinc   1025236 Jun 21 18:59 agis_schedconf.cvmfs.json
[2024-06-21 23:30:44] -rw------- 1 boinc boinc   1321363 Jun 21 18:59 cric_ddmendpoints.json
[2024-06-21 23:30:44] drwx------ 4 boinc boinc      4096 Jun 21 18:59 pilot3
[2024-06-21 23:30:44] -rw------- 1 boinc boinc 268788957 Jun 21 23:29 HITS.40024058._000482.pool.root.1
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc       531 Jun 21 23:30 boinc_task_state.xml
[2024-06-21 23:30:44] -rw------- 1 boinc boinc      1048 Jun 21 23:30 memory_monitor_summary.json
[2024-06-21 23:30:44] -rw------- 1 boinc boinc         0 Jun 21 23:30 agis_ddmendpoints.agis.ALL.json
[2024-06-21 23:30:44] -rw------- 1 boinc boinc    356040 Jun 21 23:30 log.40024058._000482.job.log.tgz.1
[2024-06-21 23:30:44] -rw------- 1 boinc boinc      7758 Jun 21 23:30 heartbeat.json
[2024-06-21 23:30:44] -rw------- 1 boinc boinc        95 Jun 21 23:30 pilot_heartbeat.json
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc      8192 Jun 21 23:30 boinc_mmap_file
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc        28 Jun 21 23:30 wrapper_checkpoint.txt
[2024-06-21 23:30:44] -rw------- 1 boinc boinc      4221 Jun 21 23:30 pilotlog.txt
[2024-06-21 23:30:44] -rw------- 1 boinc boinc   1685244 Jun 21 23:30 log.40024058._000482.job.log.1
[2024-06-21 23:30:44] -rw------- 1 boinc boinc       357 Jun 21 23:30 output.list
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc       620 Jun 21 23:30 runtime_log
[2024-06-21 23:30:44] -rw------- 1 boinc boinc   2058240 Jun 21 23:30 result.tar.gz
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc     11410 Jun 21 23:30 runtime_log.err
[2024-06-21 23:30:44] -rw------- 1 boinc boinc       660 Jun 21 23:30 eQoLDmogYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmBQlKDmLyf1Vo.diag
[2024-06-21 23:30:44] -rw-r--r-- 1 boinc boinc     21268 Jun 21 23:30 stderr.txt
[2024-06-21 23:30:44] HITS file was successfully produced:
[2024-06-21 23:30:44] -rw------- 1 boinc boinc 268788957 Jun 21 23:29 shared/HITS.pool.root.1
[2024-06-21 23:30:44]  *** Contents of shared directory: ***
[2024-06-21 23:30:44] total 858860
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc 608106788 Jun 21 18:59 ATLAS.root_0
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:59 start_atlas.sh
[2024-06-21 23:30:44] -rw-r--r-- 2 boinc boinc    482498 Jun 21 18:59 input.tar.gz
[2024-06-21 23:30:44] -rw------- 1 boinc boinc 268788957 Jun 21 23:29 HITS.pool.root.1
[2024-06-21 23:30:44] -rw------- 1 boinc boinc   2058240 Jun 21 23:30 result.tar.gz
23:30:45 (3897454): run_atlas exited; CPU time 61367.974906
23:30:45 (3897454): called boinc_finish(0)

</stderr_txt>
]]>

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