Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:28:26 (3193983): wrapper (7.7.26015): starting
13:28:26 (3193983): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 13:28:26] Arguments: --nthreads 4
[2024-06-21 13:28:26] Threads: 4
[2024-06-21 13:28:26] Checking for CVMFS
[2024-06-21 13:28:26] No cvmfs_config command found, will try listing directly
[2024-06-21 13:28:26] CVMFS is ok
[2024-06-21 13:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 13:28:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 13:28:26] Further information can be found at the LHC@home message board.
[2024-06-21 13:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 13:28:26] Checking for apptainer binary...
[2024-06-21 13:28:26] which: no apptainer in ((null))
[2024-06-21 13:28:26] apptainer is not installed, using version from CVMFS
[2024-06-21 13:28:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 13:28:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-06-21 13:28:27] apptainer works
[2024-06-21 13:28:27] Set ATHENA_PROC_NUMBER=4
[2024-06-21 13:28:27] Set ATHENA_CORE_NUMBER=4
[2024-06-21 13:28:27] Starting ATLAS job with PandaID=6238889512
[2024-06-21 13:28:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 17:56:02]  *** The last 200 lines of the pilot log: ***
[2024-06-21 17:56:02] 2024-06-21 15:55:46,376 | WARNING  | GPU info not found in prmon json
[2024-06-21 17:56:02] 2024-06-21 15:55:46,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 17:56:02] 2024-06-21 15:55:46,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 17:56:02] 2024-06-21 15:55:46,381 | INFO     | fitting pss+swap vs Time
[2024-06-21 17:56:02] 2024-06-21 15:55:46,382 | INFO     | model: linear, x: [1718969343.0, 1718969404.0, 1718969465.0, 1718969526.0, 1718969587.0, 1718969648.0, 1718969709.0, 1718969770.0, 1718969831.0, 1718969892.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,382 | INFO     | sum of square deviations: 5640782972.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,384 | INFO     | sum of deviations: 79590473216.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,384 | INFO     | mean x: 1718977334.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,384 | INFO     | mean y: 2318215.136882129
[2024-06-21 17:56:02] 2024-06-21 15:55:46,384 | INFO     | -- intersect: -24252154991.82097
[2024-06-21 17:56:02] 2024-06-21 15:55:46,385 | INFO     | intersect: -24252154991.82097
[2024-06-21 17:56:02] 2024-06-21 15:55:46,385 | INFO     | chi2: 4.826400361159187
[2024-06-21 17:56:02] 2024-06-21 15:55:46,385 | INFO     | model: linear, x: [1718969343.0, 1718969404.0, 1718969465.0, 1718969526.0, 1718969587.0, 1718969648.0, 1718969709.0, 1718969770.0, 1718969831.0, 1718969892.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,386 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 17:56:02] 2024-06-21 15:55:46,388 | INFO     | sum of deviations: 94873965296.49998
[2024-06-21 17:56:02] 2024-06-21 15:55:46,388 | INFO     | mean x: 1718977181.5
[2024-06-21 17:56:02] 2024-06-21 15:55:46,388 | INFO     | mean y: 2325473.391472868
[2024-06-21 17:56:02] 2024-06-21 15:55:46,388 | INFO     | -- intersect: -30623383188.804085
[2024-06-21 17:56:02] 2024-06-21 15:55:46,388 | INFO     | intersect: -30623383188.804085
[2024-06-21 17:56:02] 2024-06-21 15:55:46,389 | INFO     | chi2: 4.036139935786267
[2024-06-21 17:56:02] 2024-06-21 15:55:46,389 | INFO     | current chi2=4.036139935786267 (change=16.373702267482805 %)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,389 | INFO     | right removable region: 257
[2024-06-21 17:56:02] 2024-06-21 15:55:46,389 | INFO     | model: linear, x: [1718969648.0, 1718969709.0, 1718969770.0, 1718969831.0, 1718969892.0, 1718969953.0, 1718970014.0, 1718970075.0, 1718970136.0, 1718970197.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,389 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 17:56:02] 2024-06-21 15:55:46,391 | INFO     | sum of deviations: 19128010797.499992
[2024-06-21 17:56:02] 2024-06-21 15:55:46,391 | INFO     | mean x: 1718977486.5
[2024-06-21 17:56:02] 2024-06-21 15:55:46,392 | INFO     | mean y: 2347363.7093023257
[2024-06-21 17:56:02] 2024-06-21 15:55:46,392 | INFO     | -- intersect: -6172254784.324746
[2024-06-21 17:56:02] 2024-06-21 15:55:46,392 | INFO     | intersect: -6172254784.324746
[2024-06-21 17:56:02] 2024-06-21 15:55:46,392 | INFO     | chi2: 2.4072090353341085
[2024-06-21 17:56:02] 2024-06-21 15:55:46,392 | INFO     | current chi2=2.4072090353341085 (change=50.124132786283106 %)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,393 | INFO     | model: linear, x: [1718969953.0, 1718970014.0, 1718970075.0, 1718970136.0, 1718970197.0, 1718970258.0, 1718970319.0, 1718970380.0, 1718970441.0, 1718970502.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,393 | INFO     | sum of square deviations: 5021496942.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,395 | INFO     | sum of deviations: -30172303242.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,395 | INFO     | mean x: 1718977639.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,395 | INFO     | mean y: 2372125.138339921
[2024-06-21 17:56:02] 2024-06-21 15:55:46,395 | INFO     | -- intersect: 10331067968.069157
[2024-06-21 17:56:02] 2024-06-21 15:55:46,395 | INFO     | intersect: 10331067968.069157
[2024-06-21 17:56:02] 2024-06-21 15:55:46,396 | INFO     | chi2: 0.9270487456446271
[2024-06-21 17:56:02] 2024-06-21 15:55:46,396 | INFO     | current chi2=0.9270487456446271 (change=61.488647972112766 %)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,396 | INFO     | model: linear, x: [1718970258.0, 1718970319.0, 1718970380.0, 1718970441.0, 1718970502.0, 1718970563.0, 1718970624.0, 1718970685.0, 1718970746.0, 1718970807.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,396 | INFO     | sum of square deviations: 4729621702.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,398 | INFO     | sum of deviations: -36946263755.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,398 | INFO     | mean x: 1718977791.5
[2024-06-21 17:56:02] 2024-06-21 15:55:46,398 | INFO     | mean y: 2375623.1774193547
[2024-06-21 17:56:02] 2024-06-21 15:55:46,399 | INFO     | -- intersect: 13430470061.870096
[2024-06-21 17:56:02] 2024-06-21 15:55:46,399 | INFO     | intersect: 13430470061.870096
[2024-06-21 17:56:02] 2024-06-21 15:55:46,399 | INFO     | chi2: 0.8496933796933521
[2024-06-21 17:56:02] 2024-06-21 15:55:46,399 | INFO     | current chi2=0.8496933796933521 (change=8.344260894014331 %)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,399 | INFO     | left removable region: 30
[2024-06-21 17:56:02] 2024-06-21 15:55:46,400 | INFO     | model: linear, x: [1718971173.0, 1718971234.0, 1718971295.0, 1718971356.0, 1718971417.0, 1718971478.0, 1718971539.0, 1718971600.0, 1718971661.0, 1718971722.0, 1718
[2024-06-21 17:56:02] 2024-06-21 15:55:46,400 | INFO     | sum of square deviations: 3627000098.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | sum of deviations: -15761386424.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | mean x: 1718978066.0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | mean y: 2381821.8898678413
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | -- intersect: 7472323046.194234
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | intersect: 7472323046.194234
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | chi2: 0.01864957096713183
[2024-06-21 17:56:02] 2024-06-21 15:55:46,402 | INFO     | -- intersect: 7472323046.194234
[2024-06-21 17:56:02] 2024-06-21 15:55:46,403 | INFO     | current memory leak: -4.35 B/s (using 227 data points, chi2=0.02)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,403 | INFO     | ..............................
[2024-06-21 17:56:02] 2024-06-21 15:55:46,403 | INFO     | . Timing measurements:
[2024-06-21 17:56:02] 2024-06-21 15:55:46,403 | INFO     | . get job = 0 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,403 | INFO     | . initial setup = 1 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | . payload setup = 5 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | . stage-in = 0 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | . payload execution = 15989 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | . stage-out = 1 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | . log creation = 0 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,404 | INFO     | ..............................
[2024-06-21 17:56:02] 2024-06-21 15:55:46,497 | INFO     | 
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | job summary report
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | --------------------------------------------------
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | PanDA job id: 6238889512
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | task id: 40024058
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | errors: (none)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | pilot state: finished 
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | transexitcode: 0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | exeerrorcode: 0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | exeerrordiag: 
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | exitcode: 0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | exitmsg: OK
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | cpuconsumptiontime: 60800 s
[2024-06-21 17:56:02] 2024-06-21 15:55:46,498 | INFO     | nevents: 400
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | neventsw: 0
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | pid: 3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | pgrp: 3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | corecount: 4
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | event service: False
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | sizes: {0: 2386931, 5: 2387137, 11: 2387193, 15999: 2418720, 16000: 2427702, 16003: 2427758, 16014: 2428056}
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | --------------------------------------------------
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | 
[2024-06-21 17:56:02] 2024-06-21 15:55:46,499 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-06-21 17:56:02] 2024-06-21 15:55:46,530 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,530 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,530 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,530 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | job 6238889512 has completed (purged errors)
[2024-06-21 17:56:02] 2024-06-21 15:55:46,532 | INFO     | overall cleanup function is called
[2024-06-21 17:56:02] 2024-06-21 15:55:47,536 | INFO     | --- collectZombieJob: --- 10, [3205365]
[2024-06-21 17:56:02] 2024-06-21 15:55:47,537 | INFO     | zombie collector waiting for pid 3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:47,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 17:56:02] 2024-06-21 15:55:48,541 | INFO     | collected zombie processes
[2024-06-21 17:56:02] 2024-06-21 15:55:48,542 | INFO     | will now attempt to kill all subprocesses of pid=3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:48,760 | INFO     | process IDs to be killed: [3205365] (in reverse order)
[2024-06-21 17:56:02] 2024-06-21 15:55:48,859 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 17:56:02] 2024-06-21 15:55:48,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 17:56:02] 2024-06-21 15:55:48,866 | INFO     | did not find any defunct processes belonging to 3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:48,871 | INFO     | did not find any defunct processes belonging to 3205365
[2024-06-21 17:56:02] 2024-06-21 15:55:48,872 | INFO     | ready for new job
[2024-06-21 17:56:02] 2024-06-21 15:55:48,872 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 17:56:02] 2024-06-21 15:55:48,873 | INFO     | *************************************
[2024-06-21 17:56:02] 2024-06-21 15:55:48,873 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 17:56:02] 2024-06-21 15:55:48,873 | INFO     | *************************************
[2024-06-21 17:56:02] 2024-06-21 15:55:48,873 | INFO     | 
[2024-06-21 17:56:02] 2024-06-21 15:55:48,876 | INFO     | architecture information:
[2024-06-21 17:56:02] 2024-06-21 15:55:48,876 | INFO     | executing command: cat /etc/os-release
[2024-06-21 17:56:02] 2024-06-21 15:55:48,899 | INFO     | cat /etc/os-release:
[2024-06-21 17:56:02] NAME="CentOS Linux"
[2024-06-21 17:56:02] VERSION="7 (Core)"
[2024-06-21 17:56:02] ID="centos"
[2024-06-21 17:56:02] ID_LIKE="rhel fedora"
[2024-06-21 17:56:02] VERSION_ID="7"
[2024-06-21 17:56:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 17:56:02] ANSI_COLOR="0;31"
[2024-06-21 17:56:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 17:56:02] HOME_URL="https://www.centos.org/"
[2024-06-21 17:56:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 17:56:02] 
[2024-06-21 17:56:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 17:56:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 17:56:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 17:56:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 17:56:02] 
[2024-06-21 17:56:02] 2024-06-21 15:55:48,900 | INFO     | *************************************
[2024-06-21 17:56:02] 2024-06-21 15:55:49,402 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-06-21 17:56:02] 2024-06-21 15:55:49,426 | INFO     | sufficient remaining disk space (669537796096 B)
[2024-06-21 17:56:02] 2024-06-21 15:55:49,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 17:56:02] 2024-06-21 15:55:49,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 17:56:02] 2024-06-21 15:55:49,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 17:56:02] 2024-06-21 15:55:49,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:56:02] 2024-06-21 15:55:49,448 | INFO     | aborting loop
[2024-06-21 17:56:02] 2024-06-21 15:55:49,591 | INFO     | all data control threads have been joined
[2024-06-21 17:56:02] 2024-06-21 15:55:49,601 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 17:56:02] 2024-06-21 15:55:49,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 17:56:02] 2024-06-21 15:55:49,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 17:56:02] 2024-06-21 15:55:49,669 | INFO     | all payload control threads have been joined
[2024-06-21 17:56:02] 2024-06-21 15:55:49,713 | INFO     | all job control threads have been joined
[2024-06-21 17:56:02] 2024-06-21 15:55:50,431 | INFO     | [job] retrieve thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,453 | INFO     | [job] job monitor thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,476 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,596 | INFO     | [data] control thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,674 | INFO     | [payload] control thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,700 | INFO     | [payload] failed_post thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,718 | INFO     | [job] control thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,817 | INFO     | [data] copytool_in thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:50,948 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:51,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 17:56:02] 2024-06-21 15:55:51,155 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:51,432 | INFO     | [data] copytool_out thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:51,442 | INFO     | [job] validate thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:51,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:56:02] 2024-06-21 15:55:51,743 | INFO     | [payload] validate_post thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:51,824 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:52,513 | INFO     | [job] queue monitor thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:55,156 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 17:56:02] 2024-06-21 15:55:56,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47238741525568)>', '<ExcThread(monitor, started 47238921799424)>']
[2024-06-21 17:56:02] 2024-06-21 15:55:57,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 17:56:02] 2024-06-21 15:55:57,647 | INFO     | [monitor] control thread has ended
[2024-06-21 17:56:02] 2024-06-21 15:56:01,737 | INFO     | all workflow threads have been joined
[2024-06-21 17:56:02] 2024-06-21 15:56:01,737 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 17:56:02] 2024-06-21 15:56:01,738 | INFO     | traces error code: 0
[2024-06-21 17:56:02] 2024-06-21 15:56:01,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 17:56:02] 2024-06-21 15:56:01,882 [wrapper] ==== pilot stdout END ====
[2024-06-21 17:56:02] 2024-06-21 15:56:01,884 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 17:56:02] 2024-06-21 15:56:01,886 [wrapper] pilotpid: 3198328
[2024-06-21 17:56:02] 2024-06-21 15:56:01,888 [wrapper] Pilot exit status: 0
[2024-06-21 17:56:02] 2024-06-21 15:56:01,899 [wrapper] pandaids: 6238889512
[2024-06-21 17:56:02] 2024-06-21 15:56:01,963 [wrapper] cleanup supervisor_pilot 3822489 3198329
[2024-06-21 17:56:02] 2024-06-21 15:56:01,965 [wrapper] Test setup, not cleaning
[2024-06-21 17:56:02] 2024-06-21 15:56:01,967 [wrapper] ==== wrapper stdout END ====
[2024-06-21 17:56:02] 2024-06-21 15:56:01,969 [wrapper] ==== wrapper stderr END ====
[2024-06-21 17:56:02] 2024-06-21 15:56:01,974 [wrapper] apfmon messages muted
[2024-06-21 17:56:02]  *** Error codes and diagnostics ***
[2024-06-21 17:56:02]     "exeErrorCode": 0,
[2024-06-21 17:56:02]     "exeErrorDiag": "",
[2024-06-21 17:56:02]     "pilotErrorCode": 0,
[2024-06-21 17:56:02]     "pilotErrorDiag": "",
[2024-06-21 17:56:02]  *** Listing of results directory ***
[2024-06-21 17:56:02] total 867796
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-21 17:56:02] -rwx------ 1 boinc boinc     32308 Jun 20 17:18 runpilot2-wrapper.sh
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc       100 Jun 21 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 17:56:02] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 13:28 run_atlas
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc       105 Jun 21 13:28 job.xml
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc      6661 Jun 21 13:28 init_data.xml
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc 613967211 Jun 21 13:28 EVNT.40024055._000039.pool.root.1
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc     17537 Jun 21 13:28 start_atlas.sh
[2024-06-21 17:56:02] drwxrwx--x 2 boinc boinc      4096 Jun 21 13:28 shared
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc    482501 Jun 21 13:28 input.tar.gz
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc         0 Jun 21 13:28 boinc_lockfile
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc      2553 Jun 21 13:28 pandaJob.out
[2024-06-21 17:56:02] -rw------- 1 boinc boinc       424 Jun 21 13:28 setup.sh.local
[2024-06-21 17:56:02] -rw------- 1 boinc boinc   1023843 Jun 21 13:28 agis_schedconf.cvmfs.json
[2024-06-21 17:56:02] -rw------- 1 boinc boinc   1321251 Jun 21 13:28 cric_ddmendpoints.json
[2024-06-21 17:56:02] drwx------ 4 boinc boinc      4096 Jun 21 13:28 pilot3
[2024-06-21 17:56:02] -rw------- 1 boinc boinc 267189550 Jun 21 17:54 HITS.40024058._000707.pool.root.1
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc       532 Jun 21 17:55 boinc_task_state.xml
[2024-06-21 17:56:02] -rw------- 1 boinc boinc      1045 Jun 21 17:55 memory_monitor_summary.json
[2024-06-21 17:56:02] -rw------- 1 boinc boinc        95 Jun 21 17:55 pilot_heartbeat.json
[2024-06-21 17:56:02] -rw------- 1 boinc boinc         0 Jun 21 17:55 agis_ddmendpoints.agis.ALL.json
[2024-06-21 17:56:02] -rw------- 1 boinc boinc    350420 Jun 21 17:55 log.40024058._000707.job.log.tgz.1
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc      8192 Jun 21 17:55 boinc_mmap_file
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc        28 Jun 21 17:55 wrapper_checkpoint.txt
[2024-06-21 17:56:02] -rw------- 1 boinc boinc      7755 Jun 21 17:55 heartbeat.json
[2024-06-21 17:56:02] -rw------- 1 boinc boinc      4221 Jun 21 17:56 pilotlog.txt
[2024-06-21 17:56:02] -rw------- 1 boinc boinc   1614394 Jun 21 17:56 log.40024058._000707.job.log.1
[2024-06-21 17:56:02] -rw------- 1 boinc boinc       357 Jun 21 17:56 output.list
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc       620 Jun 21 17:56 runtime_log
[2024-06-21 17:56:02] -rw------- 1 boinc boinc   1986560 Jun 21 17:56 result.tar.gz
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc     11410 Jun 21 17:56 runtime_log.err
[2024-06-21 17:56:02] -rw------- 1 boinc boinc       658 Jun 21 17:56 LpfNDmMjYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm9NXKDmYIe27m.diag
[2024-06-21 17:56:02] -rw-r--r-- 1 boinc boinc     21261 Jun 21 17:56 stderr.txt
[2024-06-21 17:56:02] HITS file was successfully produced:
[2024-06-21 17:56:02] -rw------- 1 boinc boinc 267189550 Jun 21 17:54 shared/HITS.pool.root.1
[2024-06-21 17:56:02]  *** Contents of shared directory: ***
[2024-06-21 17:56:02] total 862948
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc 613967211 Jun 21 13:28 ATLAS.root_0
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc     17537 Jun 21 13:28 start_atlas.sh
[2024-06-21 17:56:02] -rw-r--r-- 2 boinc boinc    482501 Jun 21 13:28 input.tar.gz
[2024-06-21 17:56:02] -rw------- 1 boinc boinc 267189550 Jun 21 17:54 HITS.pool.root.1
[2024-06-21 17:56:02] -rw------- 1 boinc boinc   1986560 Jun 21 17:56 result.tar.gz
17:56:04 (3193983): run_atlas exited; CPU time 60517.874009
17:56:04 (3193983): called boinc_finish(0)

</stderr_txt>
]]>

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