Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:59 (1640085): wrapper (7.7.26015): starting
09:13:59 (1640085): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 09:13:59] Arguments: --nthreads 4
[2024-06-21 09:13:59] Threads: 4
[2024-06-21 09:13:59] Checking for CVMFS
[2024-06-21 09:13:59] No cvmfs_config command found, will try listing directly
[2024-06-21 09:13:59] CVMFS is ok
[2024-06-21 09:13:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 09:13:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 09:13:59] Further information can be found at the LHC@home message board.
[2024-06-21 09:13:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 09:13:59] Checking for apptainer binary...
[2024-06-21 09:13:59] which: no apptainer in ((null))
[2024-06-21 09:13:59] apptainer is not installed, using version from CVMFS
[2024-06-21 09:13:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 09:14:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-21 09:14:01] apptainer works
[2024-06-21 09:14:01] Set ATHENA_PROC_NUMBER=4
[2024-06-21 09:14:01] Set ATHENA_CORE_NUMBER=4
[2024-06-21 09:14:01] Starting ATLAS job with PandaID=6238892190
[2024-06-21 09:14:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 21:48:30]  *** The last 200 lines of the pilot log: ***
[2024-06-21 21:48:30] 2024-06-21 19:48:08,097 | INFO     | intersect: -6618133683.329331
[2024-06-21 21:48:30] 2024-06-21 19:48:08,098 | INFO     | chi2: 4.300608266495264
[2024-06-21 21:48:30] 2024-06-21 19:48:08,098 | INFO     | model: linear, x: [1718954085.0, 1718954146.0, 1718954207.0, 1718954268.0, 1718954329.0, 1718954390.0, 1718954451.0, 1718954512.0, 1718954573.0, 1718954634.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,099 | INFO     | sum of square deviations: 123626355160.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,106 | INFO     | sum of deviations: 482100147039.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,106 | INFO     | mean x: 1718976502.5
[2024-06-21 21:48:30] 2024-06-21 19:48:08,106 | INFO     | mean y: 2359077.5842391304
[2024-06-21 21:48:30] 2024-06-21 19:48:08,106 | INFO     | -- intersect: -6701056416.137059
[2024-06-21 21:48:30] 2024-06-21 19:48:08,106 | INFO     | intersect: -6701056416.137059
[2024-06-21 21:48:30] 2024-06-21 19:48:08,107 | INFO     | chi2: 4.300413950984629
[2024-06-21 21:48:30] 2024-06-21 19:48:08,107 | INFO     | current chi2=4.300413950984629 (change=0.0045183262132669115 %)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,107 | INFO     | right removable region: 735
[2024-06-21 21:48:30] 2024-06-21 19:48:08,107 | INFO     | model: linear, x: [1718954390.0, 1718954451.0, 1718954512.0, 1718954573.0, 1718954634.0, 1718954695.0, 1718954756.0, 1718954817.0, 1718954878.0, 1718954939.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,108 | INFO     | sum of square deviations: 123626355160.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,115 | INFO     | sum of deviations: 304812079007.99994
[2024-06-21 21:48:30] 2024-06-21 19:48:08,115 | INFO     | mean x: 1718976807.5
[2024-06-21 21:48:30] 2024-06-21 19:48:08,115 | INFO     | mean y: 2370185.597826087
[2024-06-21 21:48:30] 2024-06-21 19:48:08,115 | INFO     | -- intersect: -4235924260.456839
[2024-06-21 21:48:30] 2024-06-21 19:48:08,115 | INFO     | intersect: -4235924260.456839
[2024-06-21 21:48:30] 2024-06-21 19:48:08,116 | INFO     | chi2: 1.8165098150991636
[2024-06-21 21:48:30] 2024-06-21 19:48:08,116 | INFO     | current chi2=1.8165098150991636 (change=57.76156063199149 %)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,116 | INFO     | model: linear, x: [1718954695.0, 1718954756.0, 1718954817.0, 1718954878.0, 1718954939.0, 1718955000.0, 1718955061.0, 1718955122.0, 1718955183.0, 1718955244.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,116 | INFO     | sum of square deviations: 121123871030.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,123 | INFO     | sum of deviations: 158566993937.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | mean x: 1718976960.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | mean y: 2379097.484268126
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | -- intersect: -2247986638.6525145
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | intersect: -2247986638.6525145
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | chi2: 0.31636984499911847
[2024-06-21 21:48:30] 2024-06-21 19:48:08,124 | INFO     | current chi2=0.31636984499911847 (change=82.58364241308281 %)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,125 | INFO     | model: linear, x: [1718955000.0, 1718955061.0, 1718955122.0, 1718955183.0, 1718955244.0, 1718955305.0, 1718955366.0, 1718955427.0, 1718955488.0, 1718955549.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,125 | INFO     | sum of square deviations: 118655387537.5
[2024-06-21 21:48:30] 2024-06-21 19:48:08,132 | INFO     | sum of deviations: 107802987276.5
[2024-06-21 21:48:30] 2024-06-21 19:48:08,132 | INFO     | mean x: 1718977112.5
[2024-06-21 21:48:30] 2024-06-21 19:48:08,132 | INFO     | mean y: 2382224.9628099175
[2024-06-21 21:48:30] 2024-06-21 19:48:08,132 | INFO     | -- intersect: -1559374654.629921
[2024-06-21 21:48:30] 2024-06-21 19:48:08,132 | INFO     | intersect: -1559374654.629921
[2024-06-21 21:48:30] 2024-06-21 19:48:08,133 | INFO     | chi2: 0.008006087908768857
[2024-06-21 21:48:30] 2024-06-21 19:48:08,133 | INFO     | current chi2=0.008006087908768857 (change=97.46938969205769 %)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,133 | INFO     | model: linear, x: [1718955305.0, 1718955366.0, 1718955427.0, 1718955488.0, 1718955549.0, 1718955610.0, 1718955671.0, 1718955732.0, 1718955793.0, 1718955854.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,134 | INFO     | sum of square deviations: 116220672120.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,141 | INFO     | sum of deviations: 102664187060.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,141 | INFO     | mean x: 1718977265.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,141 | INFO     | mean y: 2382546.6185852983
[2024-06-21 21:48:30] 2024-06-21 19:48:08,141 | INFO     | -- intersect: -1516085728.1443672
[2024-06-21 21:48:30] 2024-06-21 19:48:08,141 | INFO     | intersect: -1516085728.1443672
[2024-06-21 21:48:30] 2024-06-21 19:48:08,142 | INFO     | chi2: 0.007303621424576829
[2024-06-21 21:48:30] 2024-06-21 19:48:08,142 | INFO     | current chi2=0.007303621424576829 (change=8.774154021249693 %)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,142 | INFO     | left removable region: 40
[2024-06-21 21:48:30] 2024-06-21 19:48:08,142 | INFO     | model: linear, x: [1718956525.0, 1718956586.0, 1718956647.0, 1718956708.0, 1718956769.0, 1718956830.0, 1718956891.0, 1718956952.0, 1718957013.0, 1718957074.0, 1718
[2024-06-21 21:48:30] 2024-06-21 19:48:08,143 | INFO     | sum of square deviations: 104095495940.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,149 | INFO     | sum of deviations: 87394313198.99997
[2024-06-21 21:48:30] 2024-06-21 19:48:08,149 | INFO     | mean x: 1718977692.0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,149 | INFO     | mean y: 2383377.581294964
[2024-06-21 21:48:30] 2024-06-21 19:48:08,150 | INFO     | -- intersect: -1440799859.5045161
[2024-06-21 21:48:30] 2024-06-21 19:48:08,150 | INFO     | intersect: -1440799859.5045161
[2024-06-21 21:48:30] 2024-06-21 19:48:08,150 | INFO     | chi2: 0.006428082053970746
[2024-06-21 21:48:30] 2024-06-21 19:48:08,150 | INFO     | -- intersect: -1440799859.5045161
[2024-06-21 21:48:30] 2024-06-21 19:48:08,150 | INFO     | current memory leak: 0.84 B/s (using 695 data points, chi2=0.01)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | ..............................
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . Timing measurements:
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . get job = 0 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . initial setup = 1 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . payload setup = 6 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . stage-in = 0 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . payload execution = 45197 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . stage-out = 1 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | . log creation = 0 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,151 | INFO     | ..............................
[2024-06-21 21:48:30] 2024-06-21 19:48:08,207 | INFO     | 
[2024-06-21 21:48:30] 2024-06-21 19:48:08,207 | INFO     | job summary report
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | --------------------------------------------------
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | PanDA job id: 6238892190
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | task id: 38921007
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | errors: (none)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | pilot state: finished 
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | transexitcode: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,208 | INFO     | exeerrorcode: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | exeerrordiag: 
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | exitcode: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | exitmsg: OK
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | cpuconsumptiontime: 176789 s
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | nevents: 400
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | neventsw: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | pid: 1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | pgrp: 1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | corecount: 4
[2024-06-21 21:48:30] 2024-06-21 19:48:08,209 | INFO     | event service: False
[2024-06-21 21:48:30] 2024-06-21 19:48:08,210 | INFO     | sizes: {0: 2387099, 1: 2387127, 12: 2387361, 45207: 2432019, 45210: 2441057, 45215: 2441171}
[2024-06-21 21:48:30] 2024-06-21 19:48:08,210 | INFO     | --------------------------------------------------
[2024-06-21 21:48:30] 2024-06-21 19:48:08,210 | INFO     | 
[2024-06-21 21:48:30] 2024-06-21 19:48:08,210 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-21 21:48:30] 2024-06-21 19:48:08,229 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,231 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 21:48:30] 2024-06-21 19:48:08,232 | INFO     | job 6238892190 has completed (purged errors)
[2024-06-21 21:48:30] 2024-06-21 19:48:08,232 | INFO     | overall cleanup function is called
[2024-06-21 21:48:30] 2024-06-21 19:48:09,239 | INFO     | --- collectZombieJob: --- 10, [1651318]
[2024-06-21 21:48:30] 2024-06-21 19:48:09,240 | INFO     | zombie collector waiting for pid 1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:09,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 21:48:30] 2024-06-21 19:48:10,245 | INFO     | collected zombie processes
[2024-06-21 21:48:30] 2024-06-21 19:48:10,245 | INFO     | will now attempt to kill all subprocesses of pid=1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:10,336 | INFO     | process IDs to be killed: [1651318] (in reverse order)
[2024-06-21 21:48:30] 2024-06-21 19:48:10,423 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 21:48:30] 2024-06-21 19:48:10,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 21:48:30] 2024-06-21 19:48:10,427 | INFO     | did not find any defunct processes belonging to 1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:10,430 | INFO     | did not find any defunct processes belonging to 1651318
[2024-06-21 21:48:30] 2024-06-21 19:48:10,431 | INFO     | ready for new job
[2024-06-21 21:48:30] 2024-06-21 19:48:10,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 21:48:30] 2024-06-21 19:48:10,433 | INFO     | *************************************
[2024-06-21 21:48:30] 2024-06-21 19:48:10,433 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 21:48:30] 2024-06-21 19:48:10,434 | INFO     | *************************************
[2024-06-21 21:48:30] 2024-06-21 19:48:10,434 | INFO     | 
[2024-06-21 21:48:30] 2024-06-21 19:48:10,435 | INFO     | architecture information:
[2024-06-21 21:48:30] 2024-06-21 19:48:10,435 | INFO     | executing command: cat /etc/os-release
[2024-06-21 21:48:30] 2024-06-21 19:48:10,449 | INFO     | cat /etc/os-release:
[2024-06-21 21:48:30] NAME="CentOS Linux"
[2024-06-21 21:48:30] VERSION="7 (Core)"
[2024-06-21 21:48:30] ID="centos"
[2024-06-21 21:48:30] ID_LIKE="rhel fedora"
[2024-06-21 21:48:30] VERSION_ID="7"
[2024-06-21 21:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 21:48:30] ANSI_COLOR="0;31"
[2024-06-21 21:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 21:48:30] HOME_URL="https://www.centos.org/"
[2024-06-21 21:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 21:48:30] 
[2024-06-21 21:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 21:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 21:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 21:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 21:48:30] 
[2024-06-21 21:48:30] 2024-06-21 19:48:10,449 | INFO     | *************************************
[2024-06-21 21:48:30] 2024-06-21 19:48:10,952 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-21 21:48:30] 2024-06-21 19:48:10,967 | INFO     | sufficient remaining disk space (1666260664320 B)
[2024-06-21 21:48:30] 2024-06-21 19:48:10,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 21:48:30] 2024-06-21 19:48:10,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 21:48:30] 2024-06-21 19:48:10,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 21:48:30] 2024-06-21 19:48:10,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 21:48:30] 2024-06-21 19:48:10,968 | INFO     | aborting loop
[2024-06-21 21:48:30] 2024-06-21 19:48:11,219 | INFO     | all job control threads have been joined
[2024-06-21 21:48:30] 2024-06-21 19:48:11,327 | INFO     | all data control threads have been joined
[2024-06-21 21:48:30] 2024-06-21 19:48:11,437 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 21:48:30] 2024-06-21 19:48:11,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 21:48:30] 2024-06-21 19:48:11,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 21:48:30] 2024-06-21 19:48:11,545 | INFO     | all payload control threads have been joined
[2024-06-21 21:48:30] 2024-06-21 19:48:11,973 | INFO     | [job] retrieve thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:11,973 | INFO     | [job] job monitor thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,224 | INFO     | [job] control thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,332 | INFO     | [data] control thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,359 | INFO     | [payload] validate_post thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,516 | INFO     | [payload] failed_post thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,550 | INFO     | [payload] control thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,790 | INFO     | [job] validate thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,973 | INFO     | [data] copytool_out thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,992 | INFO     | [data] copytool_in thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:12,996 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:13,011 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:13,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 21:48:30] 2024-06-21 19:48:13,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 21:48:30] 2024-06-21 19:48:13,326 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:14,222 | INFO     | [job] queue monitor thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:17,091 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:21,898 | INFO     | job.realtimelogging is not enabled
[2024-06-21 21:48:30] 2024-06-21 19:48:22,903 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 21:48:30] 2024-06-21 19:48:24,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47047702721600)>', '<ExcThread(monitor, started 47048095201024)>']
[2024-06-21 21:48:30] 2024-06-21 19:48:24,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 21:48:30] 2024-06-21 19:48:24,503 | INFO     | [monitor] control thread has ended
[2024-06-21 21:48:30] 2024-06-21 19:48:29,318 | INFO     | all workflow threads have been joined
[2024-06-21 21:48:30] 2024-06-21 19:48:29,318 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 21:48:30] 2024-06-21 19:48:29,318 | INFO     | traces error code: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:29,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 21:48:30] 2024-06-21 19:48:29,423 [wrapper] ==== pilot stdout END ====
[2024-06-21 21:48:30] 2024-06-21 19:48:29,425 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 21:48:30] 2024-06-21 19:48:29,427 [wrapper] pilotpid: 1644372
[2024-06-21 21:48:30] 2024-06-21 19:48:29,429 [wrapper] Pilot exit status: 0
[2024-06-21 21:48:30] 2024-06-21 19:48:29,457 [wrapper] pandaids: 6238892190
[2024-06-21 21:48:30] 2024-06-21 19:48:29,512 [wrapper] cleanup supervisor_pilot 2845299 1644373
[2024-06-21 21:48:30] 2024-06-21 19:48:29,514 [wrapper] Test setup, not cleaning
[2024-06-21 21:48:30] 2024-06-21 19:48:29,516 [wrapper] ==== wrapper stdout END ====
[2024-06-21 21:48:30] 2024-06-21 19:48:29,520 [wrapper] ==== wrapper stderr END ====
[2024-06-21 21:48:30] 2024-06-21 19:48:29,527 [wrapper] apfmon messages muted
[2024-06-21 21:48:30]  *** Error codes and diagnostics ***
[2024-06-21 21:48:30]     "exeErrorCode": 0,
[2024-06-21 21:48:30]     "exeErrorDiag": "",
[2024-06-21 21:48:30]     "pilotErrorCode": 0,
[2024-06-21 21:48:30]     "pilotErrorDiag": "",
[2024-06-21 21:48:30]  *** Listing of results directory ***
[2024-06-21 21:48:30] total 929896
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-21 21:48:30] -rwx------ 1 boinc boinc     32308 Jun 20 17:18 runpilot2-wrapper.sh
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc       100 Jun 21 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 21:48:30] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 09:13 run_atlas
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc       105 Jun 21 09:13 job.xml
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc 585180719 Jun 21 09:13 EVNT.38776201._000837.pool.root.1
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc      6454 Jun 21 09:13 init_data.xml
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:13 start_atlas.sh
[2024-06-21 21:48:30] drwxrwx--x 2 boinc boinc      4096 Jun 21 09:13 shared
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc    482529 Jun 21 09:13 input.tar.gz
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc         0 Jun 21 09:13 boinc_lockfile
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc      2630 Jun 21 09:14 pandaJob.out
[2024-06-21 21:48:30] -rw------- 1 boinc boinc       424 Jun 21 09:14 setup.sh.local
[2024-06-21 21:48:30] -rw------- 1 boinc boinc   1023400 Jun 21 09:14 agis_schedconf.cvmfs.json
[2024-06-21 21:48:30] -rw------- 1 boinc boinc   1321251 Jun 21 09:14 cric_ddmendpoints.json
[2024-06-21 21:48:30] drwx------ 4 boinc boinc      4096 Jun 21 09:14 pilot3
[2024-06-21 21:48:30] -rw------- 1 boinc boinc 350937858 Jun 21 21:47 HITS.38921007._051284.pool.root.1
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc       533 Jun 21 21:47 boinc_task_state.xml
[2024-06-21 21:48:30] -rw------- 1 boinc boinc        95 Jun 21 21:47 pilot_heartbeat.json
[2024-06-21 21:48:30] -rw------- 1 boinc boinc      1045 Jun 21 21:47 memory_monitor_summary.json
[2024-06-21 21:48:30] -rw------- 1 boinc boinc         0 Jun 21 21:48 agis_ddmendpoints.agis.ALL.json
[2024-06-21 21:48:30] -rw------- 1 boinc boinc    699621 Jun 21 21:48 log.38921007._051284.job.log.tgz.1
[2024-06-21 21:48:30] -rw------- 1 boinc boinc      7764 Jun 21 21:48 heartbeat.json
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc        29 Jun 21 21:48 wrapper_checkpoint.txt
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc      8192 Jun 21 21:48 boinc_mmap_file
[2024-06-21 21:48:30] -rw------- 1 boinc boinc      4294 Jun 21 21:48 pilotlog.txt
[2024-06-21 21:48:30] -rw------- 1 boinc boinc   5579347 Jun 21 21:48 log.38921007._051284.job.log.1
[2024-06-21 21:48:30] -rw------- 1 boinc boinc       357 Jun 21 21:48 output.list
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc       620 Jun 21 21:48 runtime_log
[2024-06-21 21:48:30] -rw------- 1 boinc boinc   6297600 Jun 21 21:48 result.tar.gz
[2024-06-21 21:48:30] -rw------- 1 boinc boinc       660 Jun 21 21:48 Zx6NDmGjYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmORlKDmktM8tn.diag
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc     11410 Jun 21 21:48 runtime_log.err
[2024-06-21 21:48:30] -rw-r--r-- 1 boinc boinc     21288 Jun 21 21:48 stderr.txt
[2024-06-21 21:48:30] HITS file was successfully produced:
[2024-06-21 21:48:30] -rw------- 1 boinc boinc 350937858 Jun 21 21:47 shared/HITS.pool.root.1
[2024-06-21 21:48:30]  *** Contents of shared directory: ***
[2024-06-21 21:48:30] total 920836
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc 585180719 Jun 21 09:13 ATLAS.root_0
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:13 start_atlas.sh
[2024-06-21 21:48:30] -rw-r--r-- 2 boinc boinc    482529 Jun 21 09:13 input.tar.gz
[2024-06-21 21:48:30] -rw------- 1 boinc boinc 350937858 Jun 21 21:47 HITS.pool.root.1
[2024-06-21 21:48:30] -rw------- 1 boinc boinc   6297600 Jun 21 21:48 result.tar.gz
21:48:32 (1640085): run_atlas exited; CPU time 176382.878274
21:48:32 (1640085): called boinc_finish(0)

</stderr_txt>
]]>

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