Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:06:38 (572187): wrapper (7.7.26015): starting
19:06:38 (572187): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 19:06:38] Arguments: --nthreads 4
[2024-06-20 19:06:38] Threads: 4
[2024-06-20 19:06:38] Checking for CVMFS
[2024-06-20 19:06:38] No cvmfs_config command found, will try listing directly
[2024-06-20 19:06:38] CVMFS is ok
[2024-06-20 19:06:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 19:06:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 19:06:38] Further information can be found at the LHC@home message board.
[2024-06-20 19:06:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 19:06:38] Checking for apptainer binary...
[2024-06-20 19:06:38] which: no apptainer in ((null))
[2024-06-20 19:06:38] apptainer is not installed, using version from CVMFS
[2024-06-20 19:06:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 19:06:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-06-20 19:06:39] apptainer works
[2024-06-20 19:06:39] Set ATHENA_PROC_NUMBER=4
[2024-06-20 19:06:39] Set ATHENA_CORE_NUMBER=4
[2024-06-20 19:06:39] Starting ATLAS job with PandaID=6238889474
[2024-06-20 19:06:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 23:49:07]  *** The last 200 lines of the pilot log: ***
[2024-06-20 23:49:07] 2024-06-20 21:48:45,814 | INFO     | intersect: -1629878907.6465323
[2024-06-20 23:49:07] 2024-06-20 21:48:45,815 | INFO     | chi2: 0.04507659127041552
[2024-06-20 23:49:07] 2024-06-20 21:48:45,815 | INFO     | current chi2=0.04507659127041552 (change=49.33994473675116 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,815 | INFO     | model: linear, x: [1718905433.0, 1718905494.0, 1718905555.0, 1718905616.0, 1718905677.0, 1718905738.0, 1718905799.0, 1718905860.0, 1718905921.0, 1718905982.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,815 | INFO     | sum of square deviations: 4340323240.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,817 | INFO     | sum of deviations: 10927225118.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,817 | INFO     | mean x: 1718912753.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,817 | INFO     | mean y: 2363767.5145228216
[2024-06-20 23:49:07] 2024-06-20 21:48:45,818 | INFO     | -- intersect: -4325181802.624196
[2024-06-20 23:49:07] 2024-06-20 21:48:45,818 | INFO     | intersect: -4325181802.624196
[2024-06-20 23:49:07] 2024-06-20 21:48:45,818 | INFO     | chi2: 0.001076008846226167
[2024-06-20 23:49:07] 2024-06-20 21:48:45,818 | INFO     | current chi2=0.001076008846226167 (change=97.61293208758585 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,818 | INFO     | model: linear, x: [1718905738.0, 1718905799.0, 1718905860.0, 1718905921.0, 1718905982.0, 1718906043.0, 1718906104.0, 1718906165.0, 1718906226.0, 1718906287.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,819 | INFO     | sum of square deviations: 4075741535.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,820 | INFO     | sum of deviations: 9365922737.000002
[2024-06-20 23:49:07] 2024-06-20 21:48:45,820 | INFO     | mean x: 1718912905.5
[2024-06-20 23:49:07] 2024-06-20 21:48:45,821 | INFO     | mean y: 2364666.474576271
[2024-06-20 23:49:07] 2024-06-20 21:48:45,821 | INFO     | -- intersect: -3947641811.192116
[2024-06-20 23:49:07] 2024-06-20 21:48:45,821 | INFO     | intersect: -3947641811.192116
[2024-06-20 23:49:07] 2024-06-20 21:48:45,821 | INFO     | chi2: 0.0004665780271857621
[2024-06-20 23:49:07] 2024-06-20 21:48:45,821 | INFO     | current chi2=0.0004665780271857621 (change=56.63808631107743 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,822 | INFO     | model: linear, x: [1718906043.0, 1718906104.0, 1718906165.0, 1718906226.0, 1718906287.0, 1718906348.0, 1718906409.0, 1718906470.0, 1718906531.0, 1718906592.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,822 | INFO     | sum of square deviations: 3822136780.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,824 | INFO     | sum of deviations: 8333255872.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,824 | INFO     | mean x: 1718913058.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,824 | INFO     | mean y: 2365287.238095238
[2024-06-20 23:49:07] 2024-06-20 21:48:45,824 | INFO     | -- intersect: -3745313866.7339864
[2024-06-20 23:49:07] 2024-06-20 21:48:45,824 | INFO     | intersect: -3745313866.7339864
[2024-06-20 23:49:07] 2024-06-20 21:48:45,825 | INFO     | chi2: 0.00031137274724299846
[2024-06-20 23:49:07] 2024-06-20 21:48:45,825 | INFO     | current chi2=0.00031137274724299846 (change=33.26459260820926 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,825 | INFO     | model: linear, x: [1718906348.0, 1718906409.0, 1718906470.0, 1718906531.0, 1718906592.0, 1718906653.0, 1718906714.0, 1718906775.0, 1718906836.0, 1718906897.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,826 | INFO     | sum of square deviations: 3579276412.5
[2024-06-20 23:49:07] 2024-06-20 21:48:45,827 | INFO     | sum of deviations: 7503071796.999999
[2024-06-20 23:49:07] 2024-06-20 21:48:45,827 | INFO     | mean x: 1718913210.5
[2024-06-20 23:49:07] 2024-06-20 21:48:45,828 | INFO     | mean y: 2365807.575221239
[2024-06-20 23:49:07] 2024-06-20 21:48:45,828 | INFO     | -- intersect: -3600912549.511785
[2024-06-20 23:49:07] 2024-06-20 21:48:45,828 | INFO     | intersect: -3600912549.511785
[2024-06-20 23:49:07] 2024-06-20 21:48:45,828 | INFO     | chi2: 0.00022695792987194698
[2024-06-20 23:49:07] 2024-06-20 21:48:45,828 | INFO     | current chi2=0.00022695792987194698 (change=27.11053491947813 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,829 | INFO     | model: linear, x: [1718906653.0, 1718906714.0, 1718906775.0, 1718906836.0, 1718906897.0, 1718906958.0, 1718907019.0, 1718907080.0, 1718907141.0, 1718907202.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,829 | INFO     | sum of square deviations: 3346927870.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,830 | INFO     | sum of deviations: 6934053244.000002
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | mean x: 1718913363.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | mean y: 2366180.995475113
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | -- intersect: -3558821046.1631136
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | intersect: -3558821046.1631136
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | chi2: 0.00022136540047754802
[2024-06-20 23:49:07] 2024-06-20 21:48:45,831 | INFO     | current chi2=0.00022136540047754802 (change=2.464126015581103 %)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,832 | INFO     | left removable region: 80
[2024-06-20 23:49:07] 2024-06-20 21:48:45,832 | INFO     | model: linear, x: [1718909093.0, 1718909154.0, 1718909215.0, 1718909276.0, 1718909337.0, 1718909398.0, 1718909459.0, 1718909520.0, 1718909581.0, 1718909642.0, 1718
[2024-06-20 23:49:07] 2024-06-20 21:48:45,832 | INFO     | sum of square deviations: 1661798600.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,833 | INFO     | sum of deviations: 2802156206.9999995
[2024-06-20 23:49:07] 2024-06-20 21:48:45,833 | INFO     | mean x: 1718914400.0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,833 | INFO     | mean y: 2368920.1485714284
[2024-06-20 23:49:07] 2024-06-20 21:48:45,833 | INFO     | -- intersect: -2896097028.2892714
[2024-06-20 23:49:07] 2024-06-20 21:48:45,833 | INFO     | intersect: -2896097028.2892714
[2024-06-20 23:49:07] 2024-06-20 21:48:45,834 | INFO     | chi2: 9.437816646167159e-05
[2024-06-20 23:49:07] 2024-06-20 21:48:45,834 | INFO     | -- intersect: -2896097028.2892714
[2024-06-20 23:49:07] 2024-06-20 21:48:45,834 | INFO     | current memory leak: 1.69 B/s (using 175 data points, chi2=0.00)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,834 | INFO     | ..............................
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . Timing measurements:
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . get job = 0 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . initial setup = 1 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . payload setup = 6 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . stage-in = 0 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . payload execution = 15901 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . stage-out = 0 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | . log creation = 0 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,835 | INFO     | ..............................
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | 
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | job summary report
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | --------------------------------------------------
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | PanDA job id: 6238889474
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | task id: 40024058
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | errors: (none)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 23:49:07] 2024-06-20 21:48:45,906 | INFO     | pilot state: finished 
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | transexitcode: 0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | exeerrorcode: 0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | exeerrordiag: 
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | exitcode: 0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | exitmsg: OK
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | cpuconsumptiontime: 60516 s
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | nevents: 400
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | neventsw: 0
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | pid: 605491
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | pgrp: 605491
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | corecount: 4
[2024-06-20 23:49:07] 2024-06-20 21:48:45,907 | INFO     | event service: False
[2024-06-20 23:49:07] 2024-06-20 21:48:45,908 | INFO     | sizes: {0: 2386939, 5: 2387145, 11: 2387201, 15911: 2418383, 15913: 2427365, 15917: 2427421, 15926: 2427719}
[2024-06-20 23:49:07] 2024-06-20 21:48:45,908 | INFO     | --------------------------------------------------
[2024-06-20 23:49:07] 2024-06-20 21:48:45,908 | INFO     | 
[2024-06-20 23:49:07] 2024-06-20 21:48:45,908 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-06-20 23:49:07] 2024-06-20 21:48:45,934 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | job 6238889474 has completed (purged errors)
[2024-06-20 23:49:07] 2024-06-20 21:48:45,936 | INFO     | overall cleanup function is called
[2024-06-20 23:49:07] 2024-06-20 21:48:46,943 | INFO     | --- collectZombieJob: --- 10, [605491]
[2024-06-20 23:49:07] 2024-06-20 21:48:46,943 | INFO     | zombie collector waiting for pid 605491
[2024-06-20 23:49:07] 2024-06-20 21:48:46,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 23:49:07] 2024-06-20 21:48:47,948 | INFO     | collected zombie processes
[2024-06-20 23:49:07] 2024-06-20 21:48:47,948 | INFO     | will now attempt to kill all subprocesses of pid=605491
[2024-06-20 23:49:07] 2024-06-20 21:48:48,136 | INFO     | process IDs to be killed: [605491] (in reverse order)
[2024-06-20 23:49:07] 2024-06-20 21:48:48,276 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 23:49:07] 2024-06-20 21:48:48,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 23:49:07] 2024-06-20 21:48:48,285 | INFO     | did not find any defunct processes belonging to 605491
[2024-06-20 23:49:07] 2024-06-20 21:48:48,294 | INFO     | did not find any defunct processes belonging to 605491
[2024-06-20 23:49:07] 2024-06-20 21:48:48,294 | INFO     | ready for new job
[2024-06-20 23:49:07] 2024-06-20 21:48:48,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 23:49:07] 2024-06-20 21:48:48,296 | INFO     | *************************************
[2024-06-20 23:49:07] 2024-06-20 21:48:48,296 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 23:49:07] 2024-06-20 21:48:48,297 | INFO     | *************************************
[2024-06-20 23:49:07] 2024-06-20 21:48:48,297 | INFO     | 
[2024-06-20 23:49:07] 2024-06-20 21:48:48,301 | INFO     | architecture information:
[2024-06-20 23:49:07] 2024-06-20 21:48:48,302 | INFO     | executing command: cat /etc/os-release
[2024-06-20 23:49:07] 2024-06-20 21:48:48,325 | INFO     | cat /etc/os-release:
[2024-06-20 23:49:07] NAME="CentOS Linux"
[2024-06-20 23:49:07] VERSION="7 (Core)"
[2024-06-20 23:49:07] ID="centos"
[2024-06-20 23:49:07] ID_LIKE="rhel fedora"
[2024-06-20 23:49:07] VERSION_ID="7"
[2024-06-20 23:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 23:49:07] ANSI_COLOR="0;31"
[2024-06-20 23:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 23:49:07] HOME_URL="https://www.centos.org/"
[2024-06-20 23:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 23:49:07] 
[2024-06-20 23:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 23:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 23:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 23:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 23:49:07] 
[2024-06-20 23:49:07] 2024-06-20 21:48:48,326 | INFO     | *************************************
[2024-06-20 23:49:07] 2024-06-20 21:48:48,828 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-06-20 23:49:07] 2024-06-20 21:48:48,849 | INFO     | sufficient remaining disk space (653276479488 B)
[2024-06-20 23:49:07] 2024-06-20 21:48:48,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 23:49:07] 2024-06-20 21:48:48,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 23:49:07] 2024-06-20 21:48:48,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 23:49:07] 2024-06-20 21:48:48,880 | INFO     | all data control threads have been joined
[2024-06-20 23:49:07] 2024-06-20 21:48:48,916 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 23:49:07] 2024-06-20 21:48:48,917 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 23:49:07] 2024-06-20 21:48:48,917 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 23:49:07] 2024-06-20 21:48:48,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:49:07] 2024-06-20 21:48:48,984 | INFO     | aborting loop
[2024-06-20 23:49:07] 2024-06-20 21:48:49,854 | INFO     | [job] retrieve thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:49,886 | INFO     | [data] control thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:49,989 | INFO     | [job] job monitor thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:50,146 | INFO     | all payload control threads have been joined
[2024-06-20 23:49:07] 2024-06-20 21:48:50,246 | INFO     | all job control threads have been joined
[2024-06-20 23:49:07] 2024-06-20 21:48:50,531 | INFO     | [data] copytool_in thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:50,672 | INFO     | [job] validate thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:50,800 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:50,855 | INFO     | [data] copytool_out thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:50,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:49:07] 2024-06-20 21:48:50,988 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,095 | INFO     | [payload] failed_post thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,151 | INFO     | [payload] control thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,213 | INFO     | [payload] validate_post thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,251 | INFO     | [job] control thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,259 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:51,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 23:49:07] 2024-06-20 21:48:51,920 | INFO     | [job] queue monitor thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:55,422 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:48:59,747 | INFO     | job.realtimelogging is not enabled
[2024-06-20 23:49:07] 2024-06-20 21:49:00,752 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 23:49:07] 2024-06-20 21:49:01,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47855830860864)>', '<ExcThread(monitor, started 47856159336192)>']
[2024-06-20 23:49:07] 2024-06-20 21:49:01,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 23:49:07] 2024-06-20 21:49:01,981 | INFO     | [monitor] control thread has ended
[2024-06-20 23:49:07] 2024-06-20 21:49:06,441 | INFO     | all workflow threads have been joined
[2024-06-20 23:49:07] 2024-06-20 21:49:06,441 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 23:49:07] 2024-06-20 21:49:06,442 | INFO     | traces error code: 0
[2024-06-20 23:49:07] 2024-06-20 21:49:06,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 23:49:07] 2024-06-20 21:49:06,551 [wrapper] ==== pilot stdout END ====
[2024-06-20 23:49:07] 2024-06-20 21:49:06,553 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 23:49:07] 2024-06-20 21:49:06,555 [wrapper] pilotpid: 598409
[2024-06-20 23:49:07] 2024-06-20 21:49:06,557 [wrapper] Pilot exit status: 0
[2024-06-20 23:49:07] 2024-06-20 21:49:06,573 [wrapper] pandaids: 6238889474
[2024-06-20 23:49:07] 2024-06-20 21:49:06,646 [wrapper] cleanup supervisor_pilot 1173682 598410
[2024-06-20 23:49:07] 2024-06-20 21:49:06,649 [wrapper] Test setup, not cleaning
[2024-06-20 23:49:07] 2024-06-20 21:49:06,651 [wrapper] ==== wrapper stdout END ====
[2024-06-20 23:49:07] 2024-06-20 21:49:06,653 [wrapper] ==== wrapper stderr END ====
[2024-06-20 23:49:07] 2024-06-20 21:49:06,657 [wrapper] apfmon messages muted
[2024-06-20 23:49:07]  *** Error codes and diagnostics ***
[2024-06-20 23:49:07]     "exeErrorCode": 0,
[2024-06-20 23:49:07]     "exeErrorDiag": "",
[2024-06-20 23:49:07]     "pilotErrorCode": 0,
[2024-06-20 23:49:07]     "pilotErrorDiag": "",
[2024-06-20 23:49:07]  *** Listing of results directory ***
[2024-06-20 23:49:07] total 871112
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-20 23:49:07] -rwx------ 1 boinc boinc     32308 Jun 20 17:18 runpilot2-wrapper.sh
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc       100 Jun 20 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 23:49:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 19:06 run_atlas
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc       105 Jun 20 19:06 job.xml
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc      6661 Jun 20 19:06 init_data.xml
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc 613112826 Jun 20 19:06 EVNT.40024055._000037.pool.root.1
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc     17537 Jun 20 19:06 start_atlas.sh
[2024-06-20 23:49:07] drwxrwx--x 2 boinc boinc      4096 Jun 20 19:06 shared
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc    482512 Jun 20 19:06 input.tar.gz
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc         0 Jun 20 19:06 boinc_lockfile
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc      2561 Jun 20 19:06 pandaJob.out
[2024-06-20 23:49:07] -rw------- 1 boinc boinc       424 Jun 20 19:06 setup.sh.local
[2024-06-20 23:49:07] -rw------- 1 boinc boinc   1020792 Jun 20 19:23 agis_schedconf.cvmfs.json
[2024-06-20 23:49:07] -rw------- 1 boinc boinc   1321251 Jun 20 19:23 cric_ddmendpoints.json
[2024-06-20 23:49:07] drwx------ 4 boinc boinc      4096 Jun 20 19:23 pilot3
[2024-06-20 23:49:07] -rw------- 1 boinc boinc        95 Jun 20 23:47 pilot_heartbeat.json
[2024-06-20 23:49:07] -rw------- 1 boinc boinc 271216605 Jun 20 23:47 HITS.40024058._000669.pool.root.1
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc       532 Jun 20 23:47 boinc_task_state.xml
[2024-06-20 23:49:07] -rw------- 1 boinc boinc      1057 Jun 20 23:48 memory_monitor_summary.json
[2024-06-20 23:49:07] -rw------- 1 boinc boinc         0 Jun 20 23:48 agis_ddmendpoints.agis.ALL.json
[2024-06-20 23:49:07] -rw------- 1 boinc boinc    367629 Jun 20 23:48 log.40024058._000669.job.log.tgz.1
[2024-06-20 23:49:07] -rw------- 1 boinc boinc      7754 Jun 20 23:48 heartbeat.json
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc      8192 Jun 20 23:49 boinc_mmap_file
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc        28 Jun 20 23:49 wrapper_checkpoint.txt
[2024-06-20 23:49:07] -rw------- 1 boinc boinc      4293 Jun 20 23:49 pilotlog.txt
[2024-06-20 23:49:07] -rw------- 1 boinc boinc   1709236 Jun 20 23:49 log.40024058._000669.job.log.1
[2024-06-20 23:49:07] -rw------- 1 boinc boinc       357 Jun 20 23:49 output.list
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc       620 Jun 20 23:49 runtime_log
[2024-06-20 23:49:07] -rw------- 1 boinc boinc   2099200 Jun 20 23:49 result.tar.gz
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc     11410 Jun 20 23:49 runtime_log.err
[2024-06-20 23:49:07] -rw------- 1 boinc boinc       659 Jun 20 23:49 WZCNDmFjYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmvNXKDmnsWTmm.diag
[2024-06-20 23:49:07] -rw-r--r-- 1 boinc boinc     21340 Jun 20 23:49 stderr.txt
[2024-06-20 23:49:07] HITS file was successfully produced:
[2024-06-20 23:49:07] -rw------- 1 boinc boinc 271216605 Jun 20 23:47 shared/HITS.pool.root.1
[2024-06-20 23:49:07]  *** Contents of shared directory: ***
[2024-06-20 23:49:07] total 866156
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc 613112826 Jun 20 19:06 ATLAS.root_0
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc     17537 Jun 20 19:06 start_atlas.sh
[2024-06-20 23:49:07] -rw-r--r-- 2 boinc boinc    482512 Jun 20 19:06 input.tar.gz
[2024-06-20 23:49:07] -rw------- 1 boinc boinc 271216605 Jun 20 23:47 HITS.pool.root.1
[2024-06-20 23:49:07] -rw------- 1 boinc boinc   2099200 Jun 20 23:49 result.tar.gz
23:49:09 (572187): run_atlas exited; CPU time 60245.894765
23:49:09 (572187): called boinc_finish(0)

</stderr_txt>
]]>

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