Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:40:05 (3534792): wrapper (7.7.26015): starting
17:40:05 (3534792): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 17:40:05] Arguments: --nthreads 4
[2024-06-21 17:40:05] Threads: 4
[2024-06-21 17:40:05] Checking for CVMFS
[2024-06-21 17:40:05] No cvmfs_config command found, will try listing directly
[2024-06-21 17:40:05] CVMFS is ok
[2024-06-21 17:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 17:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 17:40:05] Further information can be found at the LHC@home message board.
[2024-06-21 17:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 17:40:05] Checking for apptainer binary...
[2024-06-21 17:40:05] which: no apptainer in ((null))
[2024-06-21 17:40:05] apptainer is not installed, using version from CVMFS
[2024-06-21 17:40:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 17:40:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-21 17:40:06] apptainer works
[2024-06-21 17:40:06] Set ATHENA_PROC_NUMBER=4
[2024-06-21 17:40:06] Set ATHENA_CORE_NUMBER=4
[2024-06-21 17:40:06] Starting ATLAS job with PandaID=6238889085
[2024-06-21 17:40:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 21:43:33]  *** The last 200 lines of the pilot log: ***
[2024-06-21 21:43:33] 2024-06-21 19:43:19,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 21:43:33] 2024-06-21 19:43:19,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 21:43:33] 2024-06-21 19:43:19,193 | INFO     | fitting pss+swap vs Time
[2024-06-21 21:43:33] 2024-06-21 19:43:19,193 | INFO     | model: linear, x: [1718984447.0, 1718984508.0, 1718984569.0, 1718984630.0, 1718984691.0, 1718984752.0, 1718984813.0, 1718984874.0, 1718984935.0, 1718984996.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,193 | INFO     | sum of square deviations: 4233158440.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,195 | INFO     | sum of deviations: 98839459975.99998
[2024-06-21 21:43:33] 2024-06-21 19:43:19,195 | INFO     | mean x: 1718991706.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,195 | INFO     | mean y: 2293947.7154811714
[2024-06-21 21:43:33] 2024-06-21 19:43:19,195 | INFO     | -- intersect: -40134217437.920944
[2024-06-21 21:43:33] 2024-06-21 19:43:19,196 | INFO     | intersect: -40134217437.920944
[2024-06-21 21:43:33] 2024-06-21 19:43:19,196 | INFO     | chi2: 5.078886432701524
[2024-06-21 21:43:33] 2024-06-21 19:43:19,196 | INFO     | model: linear, x: [1718984447.0, 1718984508.0, 1718984569.0, 1718984630.0, 1718984691.0, 1718984752.0, 1718984813.0, 1718984874.0, 1718984935.0, 1718984996.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,196 | INFO     | sum of square deviations: 3972995422.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,198 | INFO     | sum of deviations: 111909520422.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,198 | INFO     | mean x: 1718991553.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,198 | INFO     | mean y: 2301455.52991453
[2024-06-21 21:43:33] 2024-06-21 19:43:19,199 | INFO     | -- intersect: -48417467485.6093
[2024-06-21 21:43:33] 2024-06-21 19:43:19,199 | INFO     | intersect: -48417467485.6093
[2024-06-21 21:43:33] 2024-06-21 19:43:19,199 | INFO     | chi2: 4.277609463888008
[2024-06-21 21:43:33] 2024-06-21 19:43:19,199 | INFO     | current chi2=4.277609463888008 (change=15.776627011273941 %)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,199 | INFO     | right removable region: 233
[2024-06-21 21:43:33] 2024-06-21 19:43:19,200 | INFO     | model: linear, x: [1718984752.0, 1718984813.0, 1718984874.0, 1718984935.0, 1718984996.0, 1718985057.0, 1718985118.0, 1718985179.0, 1718985240.0, 1718985301.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,200 | INFO     | sum of square deviations: 3972995422.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,202 | INFO     | sum of deviations: 42078206260.00001
[2024-06-21 21:43:33] 2024-06-21 19:43:19,202 | INFO     | mean x: 1718991858.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,203 | INFO     | mean y: 2327145.1452991455
[2024-06-21 21:43:33] 2024-06-21 19:43:19,203 | INFO     | -- intersect: -18203607241.687927
[2024-06-21 21:43:33] 2024-06-21 19:43:19,203 | INFO     | intersect: -18203607241.687927
[2024-06-21 21:43:33] 2024-06-21 19:43:19,203 | INFO     | chi2: 2.508769341047941
[2024-06-21 21:43:33] 2024-06-21 19:43:19,203 | INFO     | current chi2=2.508769341047941 (change=50.60394883227395 %)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,204 | INFO     | model: linear, x: [1718985057.0, 1718985118.0, 1718985179.0, 1718985240.0, 1718985301.0, 1718985362.0, 1718985423.0, 1718985484.0, 1718985545.0, 1718985606.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,204 | INFO     | sum of square deviations: 3723716330.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,206 | INFO     | sum of deviations: -4360400780.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,206 | INFO     | mean x: 1718992011.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,206 | INFO     | mean y: 2355557.3973799124
[2024-06-21 21:43:33] 2024-06-21 19:43:19,207 | INFO     | -- intersect: 2015262406.7164226
[2024-06-21 21:43:33] 2024-06-21 19:43:19,207 | INFO     | intersect: 2015262406.7164226
[2024-06-21 21:43:33] 2024-06-21 19:43:19,207 | INFO     | chi2: 0.9285522517511718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,207 | INFO     | current chi2=0.9285522517511718 (change=62.98773918516937 %)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,208 | INFO     | model: linear, x: [1718985362.0, 1718985423.0, 1718985484.0, 1718985545.0, 1718985606.0, 1718985667.0, 1718985728.0, 1718985789.0, 1718985850.0, 1718985911.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,208 | INFO     | sum of square deviations: 3485088600.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,210 | INFO     | sum of deviations: -12324410201.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,210 | INFO     | mean x: 1718992163.5
[2024-06-21 21:43:33] 2024-06-21 19:43:19,210 | INFO     | mean y: 2360596.0848214286
[2024-06-21 21:43:33] 2024-06-21 19:43:19,210 | INFO     | -- intersect: 6081277658.950298
[2024-06-21 21:43:33] 2024-06-21 19:43:19,210 | INFO     | intersect: 6081277658.950298
[2024-06-21 21:43:33] 2024-06-21 19:43:19,211 | INFO     | chi2: 0.8412850748920959
[2024-06-21 21:43:33] 2024-06-21 19:43:19,211 | INFO     | current chi2=0.8412850748920959 (change=9.398197752953303 %)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,211 | INFO     | left removable region: 30
[2024-06-21 21:43:33] 2024-06-21 19:43:19,211 | INFO     | model: linear, x: [1718986277.0, 1718986338.0, 1718986399.0, 1718986460.0, 1718986521.0, 1718986582.0, 1718986643.0, 1718986704.0, 1718986765.0, 1718986826.0, 1718
[2024-06-21 21:43:33] 2024-06-21 19:43:19,211 | INFO     | sum of square deviations: 2593916542.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,212 | INFO     | sum of deviations: 829296952.0000001
[2024-06-21 21:43:33] 2024-06-21 19:43:19,212 | INFO     | mean x: 1718992438.0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,212 | INFO     | mean y: 2371094.1379310344
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | -- intersect: -547205257.3993071
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | intersect: -547205257.3993071
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | chi2: 0.0003467902994585255
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | -- intersect: -547205257.3993071
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | current memory leak: 0.32 B/s (using 203 data points, chi2=0.00)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,213 | INFO     | ..............................
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . Timing measurements:
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . get job = 0 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . initial setup = 1 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . payload setup = 6 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . stage-in = 0 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . payload execution = 14542 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . stage-out = 0 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | . log creation = 0 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,214 | INFO     | ..............................
[2024-06-21 21:43:33] 2024-06-21 19:43:19,623 | INFO     | 
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | job summary report
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | --------------------------------------------------
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | PanDA job id: 6238889085
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | task id: 40024058
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | errors: (none)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | pilot state: finished 
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | transexitcode: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | exeerrorcode: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | exeerrordiag: 
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | exitcode: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,624 | INFO     | exitmsg: OK
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | cpuconsumptiontime: 54962 s
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | nevents: 400
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | neventsw: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | pid: 3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | pgrp: 3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | corecount: 4
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | event service: False
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | sizes: {0: 2386768, 1: 2386967, 5: 2387173, 11: 2387229, 14553: 2417861, 14555: 2426843, 14557: 2427027, 14564: 2427197}
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | --------------------------------------------------
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | 
[2024-06-21 21:43:33] 2024-06-21 19:43:19,625 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | job 6238889085 has completed (purged errors)
[2024-06-21 21:43:33] 2024-06-21 19:43:19,649 | INFO     | overall cleanup function is called
[2024-06-21 21:43:33] 2024-06-21 19:43:20,657 | INFO     | --- collectZombieJob: --- 10, [3572213]
[2024-06-21 21:43:33] 2024-06-21 19:43:20,657 | INFO     | zombie collector waiting for pid 3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:20,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 21:43:33] 2024-06-21 19:43:21,662 | INFO     | collected zombie processes
[2024-06-21 21:43:33] 2024-06-21 19:43:21,663 | INFO     | will now attempt to kill all subprocesses of pid=3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:21,879 | INFO     | process IDs to be killed: [3572213] (in reverse order)
[2024-06-21 21:43:33] 2024-06-21 19:43:22,076 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 21:43:33] 2024-06-21 19:43:22,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 21:43:33] 2024-06-21 19:43:22,092 | INFO     | did not find any defunct processes belonging to 3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:22,101 | INFO     | did not find any defunct processes belonging to 3572213
[2024-06-21 21:43:33] 2024-06-21 19:43:22,101 | INFO     | ready for new job
[2024-06-21 21:43:33] 2024-06-21 19:43:22,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 21:43:33] 2024-06-21 19:43:22,103 | INFO     | *************************************
[2024-06-21 21:43:33] 2024-06-21 19:43:22,103 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 21:43:33] 2024-06-21 19:43:22,103 | INFO     | *************************************
[2024-06-21 21:43:33] 2024-06-21 19:43:22,103 | INFO     | 
[2024-06-21 21:43:33] 2024-06-21 19:43:22,108 | INFO     | architecture information:
[2024-06-21 21:43:33] 2024-06-21 19:43:22,108 | INFO     | executing command: cat /etc/os-release
[2024-06-21 21:43:33] 2024-06-21 19:43:22,128 | INFO     | cat /etc/os-release:
[2024-06-21 21:43:33] NAME="CentOS Linux"
[2024-06-21 21:43:33] VERSION="7 (Core)"
[2024-06-21 21:43:33] ID="centos"
[2024-06-21 21:43:33] ID_LIKE="rhel fedora"
[2024-06-21 21:43:33] VERSION_ID="7"
[2024-06-21 21:43:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 21:43:33] ANSI_COLOR="0;31"
[2024-06-21 21:43:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 21:43:33] HOME_URL="https://www.centos.org/"
[2024-06-21 21:43:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 21:43:33] 
[2024-06-21 21:43:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 21:43:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 21:43:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 21:43:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 21:43:33] 
[2024-06-21 21:43:33] 2024-06-21 19:43:22,129 | INFO     | *************************************
[2024-06-21 21:43:33] 2024-06-21 19:43:22,632 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-06-21 21:43:33] 2024-06-21 19:43:22,658 | INFO     | sufficient remaining disk space (3134582685696 B)
[2024-06-21 21:43:33] 2024-06-21 19:43:22,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 21:43:33] 2024-06-21 19:43:22,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 21:43:33] 2024-06-21 19:43:22,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 21:43:33] 2024-06-21 19:43:22,659 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 21:43:33] 2024-06-21 19:43:22,660 | INFO     | aborting loop
[2024-06-21 21:43:33] 2024-06-21 19:43:22,660 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 21:43:33] 2024-06-21 19:43:22,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 21:43:33] 2024-06-21 19:43:22,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 21:43:33] 2024-06-21 19:43:23,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 21:43:33] 2024-06-21 19:43:23,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 21:43:33] 2024-06-21 19:43:23,393 | INFO     | all job control threads have been joined
[2024-06-21 21:43:33] 2024-06-21 19:43:23,480 | INFO     | all data control threads have been joined
[2024-06-21 21:43:33] 2024-06-21 19:43:23,664 | INFO     | [job] retrieve thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:23,666 | INFO     | [job] job monitor thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:23,855 | INFO     | all payload control threads have been joined
[2024-06-21 21:43:33] 2024-06-21 19:43:23,912 | INFO     | [payload] validate_post thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,127 | INFO     | [payload] failed_post thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 21:43:33] 2024-06-21 19:43:24,396 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,399 | INFO     | [job] control thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,407 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,453 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,486 | INFO     | [data] control thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,569 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,599 | INFO     | [job] validate thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,709 | INFO     | [data] copytool_in thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:24,861 | INFO     | [payload] control thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:25,295 | INFO     | [job] queue monitor thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:25,371 | INFO     | [data] copytool_out thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:27,156 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 21:43:33] 2024-06-21 19:43:27,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47572368114752)>', '<ExcThread(monitor, started 47572550489856)>']
[2024-06-21 21:43:33] 2024-06-21 19:43:27,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 21:43:33] 2024-06-21 19:43:27,687 | INFO     | [monitor] control thread has ended
[2024-06-21 21:43:33] 2024-06-21 19:43:32,337 | INFO     | all workflow threads have been joined
[2024-06-21 21:43:33] 2024-06-21 19:43:32,338 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 21:43:33] 2024-06-21 19:43:32,338 | INFO     | traces error code: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:32,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 21:43:33] 2024-06-21 19:43:32,498 [wrapper] ==== pilot stdout END ====
[2024-06-21 21:43:33] 2024-06-21 19:43:32,501 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 21:43:33] 2024-06-21 19:43:32,503 [wrapper] pilotpid: 3550181
[2024-06-21 21:43:33] 2024-06-21 19:43:32,505 [wrapper] Pilot exit status: 0
[2024-06-21 21:43:33] 2024-06-21 19:43:32,551 [wrapper] pandaids: 6238889085
[2024-06-21 21:43:33] 2024-06-21 19:43:32,652 [wrapper] cleanup supervisor_pilot  513116 3550182
[2024-06-21 21:43:33] 2024-06-21 19:43:32,655 [wrapper] Test setup, not cleaning
[2024-06-21 21:43:33] 2024-06-21 19:43:32,657 [wrapper] ==== wrapper stdout END ====
[2024-06-21 21:43:33] 2024-06-21 19:43:32,659 [wrapper] ==== wrapper stderr END ====
[2024-06-21 21:43:33] 2024-06-21 19:43:32,663 [wrapper] apfmon messages muted
[2024-06-21 21:43:33]  *** Error codes and diagnostics ***
[2024-06-21 21:43:33]     "exeErrorCode": 0,
[2024-06-21 21:43:33]     "exeErrorDiag": "",
[2024-06-21 21:43:33]     "pilotErrorCode": 0,
[2024-06-21 21:43:33]     "pilotErrorDiag": "",
[2024-06-21 21:43:33]  *** Listing of results directory ***
[2024-06-21 21:43:33] total 870740
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:14 queuedata.json
[2024-06-21 21:43:33] -rwx------ 1 boinc boinc     32308 Jun 20 17:14 runpilot2-wrapper.sh
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc       100 Jun 21 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 21:43:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 17:39 run_atlas
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc       105 Jun 21 17:39 job.xml
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc     17537 Jun 21 17:40 start_atlas.sh
[2024-06-21 21:43:33] drwxrwx--x 2 boinc boinc      4096 Jun 21 17:40 shared
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc    482506 Jun 21 17:40 input.tar.gz
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc      6642 Jun 21 17:40 init_data.xml
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc 614022742 Jun 21 17:40 EVNT.40024055._000025.pool.root.1
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc         0 Jun 21 17:40 boinc_lockfile
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc      2561 Jun 21 17:40 pandaJob.out
[2024-06-21 21:43:33] -rw------- 1 boinc boinc       424 Jun 21 17:40 setup.sh.local
[2024-06-21 21:43:33] -rw------- 1 boinc boinc   1023047 Jun 21 17:40 agis_schedconf.cvmfs.json
[2024-06-21 21:43:33] -rw------- 1 boinc boinc   1321307 Jun 21 17:40 cric_ddmendpoints.json
[2024-06-21 21:43:33] drwx------ 4 boinc boinc      4096 Jun 21 17:40 pilot3
[2024-06-21 21:43:33] -rw------- 1 boinc boinc 270477904 Jun 21 21:42 HITS.40024058._000371.pool.root.1
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc       532 Jun 21 21:42 boinc_task_state.xml
[2024-06-21 21:43:33] -rw------- 1 boinc boinc      1038 Jun 21 21:43 memory_monitor_summary.json
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc      8192 Jun 21 21:43 boinc_mmap_file
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc        28 Jun 21 21:43 wrapper_checkpoint.txt
[2024-06-21 21:43:33] -rw------- 1 boinc boinc         0 Jun 21 21:43 agis_ddmendpoints.agis.ALL.json
[2024-06-21 21:43:33] -rw------- 1 boinc boinc    352716 Jun 21 21:43 log.40024058._000371.job.log.tgz.1
[2024-06-21 21:43:33] -rw------- 1 boinc boinc        95 Jun 21 21:43 pilot_heartbeat.json
[2024-06-21 21:43:33] -rw------- 1 boinc boinc      7706 Jun 21 21:43 heartbeat.json
[2024-06-21 21:43:33] -rw------- 1 boinc boinc      4345 Jun 21 21:43 pilotlog.txt
[2024-06-21 21:43:33] -rw------- 1 boinc boinc   1449102 Jun 21 21:43 log.40024058._000371.job.log.1
[2024-06-21 21:43:33] -rw------- 1 boinc boinc       357 Jun 21 21:43 output.list
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc       620 Jun 21 21:43 runtime_log
[2024-06-21 21:43:33] -rw------- 1 boinc boinc   1822720 Jun 21 21:43 result.tar.gz
[2024-06-21 21:43:33] -rw------- 1 boinc boinc       657 Jun 21 21:43 HSjKDmpfYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmvNlKDm47aFen.diag
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc     11410 Jun 21 21:43 runtime_log.err
[2024-06-21 21:43:33] -rw-r--r-- 1 boinc boinc     21328 Jun 21 21:43 stderr.txt
[2024-06-21 21:43:33] HITS file was successfully produced:
[2024-06-21 21:43:33] -rw------- 1 boinc boinc 270477904 Jun 21 21:42 shared/HITS.pool.root.1
[2024-06-21 21:43:33]  *** Contents of shared directory: ***
[2024-06-21 21:43:33] total 866052
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc     17537 Jun 21 17:40 start_atlas.sh
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc    482506 Jun 21 17:40 input.tar.gz
[2024-06-21 21:43:33] -rw-r--r-- 2 boinc boinc 614022742 Jun 21 17:40 ATLAS.root_0
[2024-06-21 21:43:33] -rw------- 1 boinc boinc 270477904 Jun 21 21:42 HITS.pool.root.1
[2024-06-21 21:43:33] -rw------- 1 boinc boinc   1822720 Jun 21 21:43 result.tar.gz
21:43:34 (3534792): run_atlas exited; CPU time 54627.401822
21:43:34 (3534792): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN