Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:51:15 (2422528): wrapper (7.7.26015): starting
19:51:15 (2422528): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 19:51:15] Arguments: --nthreads 4
[2024-06-21 19:51:15] Threads: 4
[2024-06-21 19:51:15] Checking for CVMFS
[2024-06-21 19:51:15] No cvmfs_config command found, will try listing directly
[2024-06-21 19:51:15] CVMFS is ok
[2024-06-21 19:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 19:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 19:51:15] Further information can be found at the LHC@home message board.
[2024-06-21 19:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 19:51:15] Checking for apptainer binary...
[2024-06-21 19:51:15] which: no apptainer in ((null))
[2024-06-21 19:51:15] apptainer is not installed, using version from CVMFS
[2024-06-21 19:51:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 19:51:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-21 19:51:16] apptainer works
[2024-06-21 19:51:16] Set ATHENA_PROC_NUMBER=4
[2024-06-21 19:51:16] Set ATHENA_CORE_NUMBER=4
[2024-06-21 19:51:16] Starting ATLAS job with PandaID=6238889090
[2024-06-21 19:51:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 23:47:28]  *** The last 200 lines of the pilot log: ***
[2024-06-21 23:47:28] 2024-06-21 21:47:10,545 | INFO     | current chi2=1.5207032119718216 (change=61.577248631688676 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,546 | INFO     | model: linear, x: [1718992946.0, 1718993007.0, 1718993068.0, 1718993129.0, 1718993190.0, 1718993251.0, 1718993312.0, 1718993373.0, 1718993434.0, 1718993495.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,546 | INFO     | sum of square deviations: 3346927870.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,547 | INFO     | sum of deviations: 18616838941.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,547 | INFO     | mean x: 1718999656.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | mean y: 2366338.6832579183
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | -- intersect: -9559339493.772104
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | intersect: -9559339493.772104
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | chi2: 0.08015280161241156
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | current chi2=0.08015280161241156 (change=94.72922783476723 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,548 | INFO     | model: linear, x: [1718993251.0, 1718993312.0, 1718993373.0, 1718993434.0, 1718993495.0, 1718993556.0, 1718993617.0, 1718993678.0, 1718993739.0, 1718993800.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,549 | INFO     | sum of square deviations: 3124858590.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,550 | INFO     | sum of deviations: 9734051118.500002
[2024-06-21 23:47:28] 2024-06-21 21:47:10,550 | INFO     | mean x: 1718999808.5
[2024-06-21 23:47:28] 2024-06-21 21:47:10,550 | INFO     | mean y: 2372407.6805555555
[2024-06-21 23:47:28] 2024-06-21 21:47:10,550 | INFO     | -- intersect: -5352376143.87893
[2024-06-21 23:47:28] 2024-06-21 21:47:10,550 | INFO     | intersect: -5352376143.87893
[2024-06-21 23:47:28] 2024-06-21 21:47:10,551 | INFO     | chi2: 0.0011701946623452824
[2024-06-21 23:47:28] 2024-06-21 21:47:10,551 | INFO     | current chi2=0.0011701946623452824 (change=98.54004521513309 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,551 | INFO     | model: linear, x: [1718993556.0, 1718993617.0, 1718993678.0, 1718993739.0, 1718993800.0, 1718993861.0, 1718993922.0, 1718993983.0, 1718994044.0, 1718994105.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,551 | INFO     | sum of square deviations: 2912836010.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | sum of deviations: 8513762313.999999
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | mean x: 1718999961.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | mean y: 2373283.0616113744
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | -- intersect: -5021993703.43732
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | intersect: -5021993703.43732
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | chi2: 0.0008099074087296353
[2024-06-21 23:47:28] 2024-06-21 21:47:10,553 | INFO     | current chi2=0.0008099074087296353 (change=30.788659802426892 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,554 | INFO     | model: linear, x: [1718993861.0, 1718993922.0, 1718993983.0, 1718994044.0, 1718994105.0, 1718994166.0, 1718994227.0, 1718994288.0, 1718994349.0, 1718994410.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,554 | INFO     | sum of square deviations: 2710627567.5
[2024-06-21 23:47:28] 2024-06-21 21:47:10,555 | INFO     | sum of deviations: 7368543434.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,555 | INFO     | mean x: 1719000113.5
[2024-06-21 23:47:28] 2024-06-21 21:47:10,555 | INFO     | mean y: 2374147.3203883497
[2024-06-21 23:47:28] 2024-06-21 21:47:10,555 | INFO     | -- intersect: -4670538926.849355
[2024-06-21 23:47:28] 2024-06-21 21:47:10,556 | INFO     | intersect: -4670538926.849355
[2024-06-21 23:47:28] 2024-06-21 21:47:10,556 | INFO     | chi2: 0.00047768918440312856
[2024-06-21 23:47:28] 2024-06-21 21:47:10,556 | INFO     | current chi2=0.00047768918440312856 (change=41.01928451890584 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,556 | INFO     | model: linear, x: [1718994166.0, 1718994227.0, 1718994288.0, 1718994349.0, 1718994410.0, 1718994471.0, 1718994532.0, 1718994593.0, 1718994654.0, 1718994715.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,556 | INFO     | sum of square deviations: 2518000700.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | sum of deviations: 6536724010.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | mean x: 1719000266.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | mean y: 2374804.771144279
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | -- intersect: -4460145921.278927
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | intersect: -4460145921.278927
[2024-06-21 23:47:28] 2024-06-21 21:47:10,558 | INFO     | chi2: 0.0003719640138071277
[2024-06-21 23:47:28] 2024-06-21 21:47:10,559 | INFO     | current chi2=0.0003719640138071277 (change=22.132628087048733 %)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,559 | INFO     | left removable region: 60
[2024-06-21 23:47:28] 2024-06-21 21:47:10,559 | INFO     | model: linear, x: [1718995996.0, 1718996057.0, 1718996118.0, 1718996179.0, 1718996240.0, 1718996301.0, 1718996362.0, 1718996423.0, 1718996484.0, 1718996545.0, 1718
[2024-06-21 23:47:28] 2024-06-21 21:47:10,559 | INFO     | sum of square deviations: 1392881930.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,560 | INFO     | sum of deviations: 2951276990.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,560 | INFO     | mean x: 1719000998.0
[2024-06-21 23:47:28] 2024-06-21 21:47:10,560 | INFO     | mean y: 2377123.8666666667
[2024-06-21 23:47:28] 2024-06-21 21:47:10,560 | INFO     | -- intersect: -3639890021.622424
[2024-06-21 23:47:28] 2024-06-21 21:47:10,560 | INFO     | intersect: -3639890021.622424
[2024-06-21 23:47:28] 2024-06-21 21:47:10,561 | INFO     | chi2: 0.00018444268238931874
[2024-06-21 23:47:28] 2024-06-21 21:47:10,561 | INFO     | -- intersect: -3639890021.622424
[2024-06-21 23:47:28] 2024-06-21 21:47:10,561 | INFO     | current memory leak: 2.12 B/s (using 165 data points, chi2=0.00)
[2024-06-21 23:47:28] 2024-06-21 21:47:10,562 | INFO     | ..............................
[2024-06-21 23:47:28] 2024-06-21 21:47:10,562 | INFO     | . Timing measurements:
[2024-06-21 23:47:28] 2024-06-21 21:47:10,562 | INFO     | . get job = 0 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . initial setup = 1 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . payload setup = 12 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . stage-in = 0 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . payload execution = 14087 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . stage-out = 1 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | . log creation = 0 s
[2024-06-21 23:47:28] 2024-06-21 21:47:10,563 | INFO     | ..............................
[2024-06-21 23:47:28] 2024-06-21 21:47:11,064 | INFO     | 
[2024-06-21 23:47:28] 2024-06-21 21:47:11,064 | INFO     | job summary report
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | --------------------------------------------------
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | PanDA job id: 6238889090
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | task id: 40024058
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | errors: (none)
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | pilot state: finished 
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | transexitcode: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | exeerrorcode: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | exeerrordiag: 
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | exitcode: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | exitmsg: OK
[2024-06-21 23:47:28] 2024-06-21 21:47:11,065 | INFO     | cpuconsumptiontime: 52675 s
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | nevents: 400
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | neventsw: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | pid: 2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | pgrp: 2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | corecount: 4
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | event service: False
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | sizes: {0: 2386788, 1: 2386987, 9: 2387193, 12: 2387221, 14104: 2417537, 14107: 2426703, 14115: 2426817}
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | --------------------------------------------------
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | 
[2024-06-21 23:47:28] 2024-06-21 21:47:11,066 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-06-21 23:47:28] 2024-06-21 21:47:11,092 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | job 6238889090 has completed (purged errors)
[2024-06-21 23:47:28] 2024-06-21 21:47:11,094 | INFO     | overall cleanup function is called
[2024-06-21 23:47:28] 2024-06-21 21:47:12,102 | INFO     | --- collectZombieJob: --- 10, [2443985]
[2024-06-21 23:47:28] 2024-06-21 21:47:12,102 | INFO     | zombie collector waiting for pid 2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:12,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 23:47:28] 2024-06-21 21:47:13,107 | INFO     | collected zombie processes
[2024-06-21 23:47:28] 2024-06-21 21:47:13,107 | INFO     | will now attempt to kill all subprocesses of pid=2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:13,332 | INFO     | process IDs to be killed: [2443985] (in reverse order)
[2024-06-21 23:47:28] 2024-06-21 21:47:13,526 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 23:47:28] 2024-06-21 21:47:13,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 23:47:28] 2024-06-21 21:47:13,540 | INFO     | did not find any defunct processes belonging to 2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:13,551 | INFO     | did not find any defunct processes belonging to 2443985
[2024-06-21 23:47:28] 2024-06-21 21:47:13,551 | INFO     | ready for new job
[2024-06-21 23:47:28] 2024-06-21 21:47:13,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 23:47:28] 2024-06-21 21:47:13,553 | INFO     | *************************************
[2024-06-21 23:47:28] 2024-06-21 21:47:13,553 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 23:47:28] 2024-06-21 21:47:13,553 | INFO     | *************************************
[2024-06-21 23:47:28] 2024-06-21 21:47:13,553 | INFO     | 
[2024-06-21 23:47:28] 2024-06-21 21:47:13,561 | INFO     | architecture information:
[2024-06-21 23:47:28] 2024-06-21 21:47:13,561 | INFO     | executing command: cat /etc/os-release
[2024-06-21 23:47:28] 2024-06-21 21:47:13,586 | INFO     | cat /etc/os-release:
[2024-06-21 23:47:28] NAME="CentOS Linux"
[2024-06-21 23:47:28] VERSION="7 (Core)"
[2024-06-21 23:47:28] ID="centos"
[2024-06-21 23:47:28] ID_LIKE="rhel fedora"
[2024-06-21 23:47:28] VERSION_ID="7"
[2024-06-21 23:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 23:47:28] ANSI_COLOR="0;31"
[2024-06-21 23:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 23:47:28] HOME_URL="https://www.centos.org/"
[2024-06-21 23:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 23:47:28] 
[2024-06-21 23:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 23:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 23:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 23:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 23:47:28] 
[2024-06-21 23:47:28] 2024-06-21 21:47:13,586 | INFO     | *************************************
[2024-06-21 23:47:28] 2024-06-21 21:47:14,088 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-06-21 23:47:28] 2024-06-21 21:47:14,110 | INFO     | sufficient remaining disk space (3161410502656 B)
[2024-06-21 23:47:28] 2024-06-21 21:47:14,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 23:47:28] 2024-06-21 21:47:14,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 23:47:28] 2024-06-21 21:47:14,110 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 23:47:28] 2024-06-21 21:47:14,111 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 23:47:28] 2024-06-21 21:47:14,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 23:47:28] 2024-06-21 21:47:14,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 23:47:28] 2024-06-21 21:47:14,166 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 23:47:28] 2024-06-21 21:47:14,166 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 23:47:28] 2024-06-21 21:47:14,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 23:47:28] 2024-06-21 21:47:14,167 | INFO     | will abort loop
[2024-06-21 23:47:28] 2024-06-21 21:47:14,316 | INFO     | all payload control threads have been joined
[2024-06-21 23:47:28] 2024-06-21 21:47:14,508 | INFO     | all data control threads have been joined
[2024-06-21 23:47:28] 2024-06-21 21:47:14,819 | INFO     | all job control threads have been joined
[2024-06-21 23:47:28] 2024-06-21 21:47:14,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 23:47:28] 2024-06-21 21:47:15,115 | INFO     | [job] retrieve thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,131 | INFO     | [payload] validate_post thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,171 | INFO     | [job] job monitor thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,321 | INFO     | [payload] control thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,342 | INFO     | [job] validate thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,464 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,513 | INFO     | [data] control thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,514 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,546 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 23:47:28] 2024-06-21 21:47:15,824 | INFO     | [job] control thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:15,881 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:16,072 | INFO     | [data] copytool_in thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:16,225 | INFO     | [payload] failed_post thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:16,682 | INFO     | [job] queue monitor thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:16,875 | INFO     | [data] copytool_out thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:17,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 23:47:28] 2024-06-21 21:47:21,063 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 23:47:28] 2024-06-21 21:47:22,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47702995407936)>', '<ExcThread(monitor, started 47703186188032)>']
[2024-06-21 23:47:28] 2024-06-21 21:47:23,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 23:47:28] 2024-06-21 21:47:23,156 | INFO     | [monitor] control thread has ended
[2024-06-21 23:47:28] 2024-06-21 21:47:27,850 | INFO     | all workflow threads have been joined
[2024-06-21 23:47:28] 2024-06-21 21:47:27,850 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 23:47:28] 2024-06-21 21:47:27,851 | INFO     | traces error code: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:27,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 23:47:28] 2024-06-21 21:47:27,993 [wrapper] ==== pilot stdout END ====
[2024-06-21 23:47:28] 2024-06-21 21:47:27,996 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 23:47:28] 2024-06-21 21:47:27,998 [wrapper] pilotpid: 2436109
[2024-06-21 23:47:28] 2024-06-21 21:47:28,001 [wrapper] Pilot exit status: 0
[2024-06-21 23:47:28] 2024-06-21 21:47:28,027 [wrapper] pandaids: 6238889090
[2024-06-21 23:47:28] 2024-06-21 21:47:28,118 [wrapper] cleanup supervisor_pilot 3780181 2436110
[2024-06-21 23:47:28] 2024-06-21 21:47:28,121 [wrapper] Test setup, not cleaning
[2024-06-21 23:47:28] 2024-06-21 21:47:28,123 [wrapper] ==== wrapper stdout END ====
[2024-06-21 23:47:28] 2024-06-21 21:47:28,126 [wrapper] ==== wrapper stderr END ====
[2024-06-21 23:47:28] 2024-06-21 21:47:28,139 [wrapper] apfmon messages muted
[2024-06-21 23:47:28]  *** Error codes and diagnostics ***
[2024-06-21 23:47:28]     "exeErrorCode": 0,
[2024-06-21 23:47:28]     "exeErrorDiag": "",
[2024-06-21 23:47:28]     "pilotErrorCode": 0,
[2024-06-21 23:47:28]     "pilotErrorDiag": "",
[2024-06-21 23:47:28]  *** Listing of results directory ***
[2024-06-21 23:47:28] total 870272
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:14 queuedata.json
[2024-06-21 23:47:28] -rwx------ 1 boinc boinc     32308 Jun 20 17:14 runpilot2-wrapper.sh
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc       100 Jun 21 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 23:47:28] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 19:51 run_atlas
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc       105 Jun 21 19:51 job.xml
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc 614022742 Jun 21 19:51 EVNT.40024055._000025.pool.root.1
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:51 start_atlas.sh
[2024-06-21 23:47:28] drwxrwx--x 2 boinc boinc      4096 Jun 21 19:51 shared
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc    482510 Jun 21 19:51 input.tar.gz
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc      6642 Jun 21 19:51 init_data.xml
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc         0 Jun 21 19:51 boinc_lockfile
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc      2561 Jun 21 19:51 pandaJob.out
[2024-06-21 23:47:28] -rw------- 1 boinc boinc       424 Jun 21 19:51 setup.sh.local
[2024-06-21 23:47:28] -rw------- 1 boinc boinc   1025624 Jun 21 19:51 agis_schedconf.cvmfs.json
[2024-06-21 23:47:28] -rw------- 1 boinc boinc   1321363 Jun 21 19:51 cric_ddmendpoints.json
[2024-06-21 23:47:28] drwx------ 4 boinc boinc      4096 Jun 21 19:51 pilot3
[2024-06-21 23:47:28] -rw------- 1 boinc boinc 270016273 Jun 21 23:46 HITS.40024058._000375.pool.root.1
[2024-06-21 23:47:28] -rw------- 1 boinc boinc        95 Jun 21 23:46 pilot_heartbeat.json
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc       531 Jun 21 23:46 boinc_task_state.xml
[2024-06-21 23:47:28] -rw------- 1 boinc boinc      1039 Jun 21 23:46 memory_monitor_summary.json
[2024-06-21 23:47:28] -rw------- 1 boinc boinc         0 Jun 21 23:47 agis_ddmendpoints.agis.ALL.json
[2024-06-21 23:47:28] -rw------- 1 boinc boinc    355171 Jun 21 23:47 log.40024058._000375.job.log.tgz.1
[2024-06-21 23:47:28] -rw------- 1 boinc boinc      7717 Jun 21 23:47 heartbeat.json
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc      8192 Jun 21 23:47 boinc_mmap_file
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc        28 Jun 21 23:47 wrapper_checkpoint.txt
[2024-06-21 23:47:28] -rw------- 1 boinc boinc      4531 Jun 21 23:47 pilotlog.txt
[2024-06-21 23:47:28] -rw------- 1 boinc boinc   1436637 Jun 21 23:47 log.40024058._000375.job.log.1
[2024-06-21 23:47:28] -rw------- 1 boinc boinc       357 Jun 21 23:47 output.list
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc       620 Jun 21 23:47 runtime_log
[2024-06-21 23:47:28] -rw------- 1 boinc boinc   1812480 Jun 21 23:47 result.tar.gz
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc     11410 Jun 21 23:47 runtime_log.err
[2024-06-21 23:47:28] -rw------- 1 boinc boinc       658 Jun 21 23:47 JHxKDmpfYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4NlKDmjclbVn.diag
[2024-06-21 23:47:28] -rw-r--r-- 1 boinc boinc     21434 Jun 21 23:47 stderr.txt
[2024-06-21 23:47:28] HITS file was successfully produced:
[2024-06-21 23:47:28] -rw------- 1 boinc boinc 270016273 Jun 21 23:46 shared/HITS.pool.root.1
[2024-06-21 23:47:28]  *** Contents of shared directory: ***
[2024-06-21 23:47:28] total 865592
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc 614022742 Jun 21 19:51 ATLAS.root_0
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 19:51 start_atlas.sh
[2024-06-21 23:47:28] -rw-r--r-- 2 boinc boinc    482510 Jun 21 19:51 input.tar.gz
[2024-06-21 23:47:28] -rw------- 1 boinc boinc 270016273 Jun 21 23:46 HITS.pool.root.1
[2024-06-21 23:47:28] -rw------- 1 boinc boinc   1812480 Jun 21 23:47 result.tar.gz
23:47:30 (2422528): run_atlas exited; CPU time 52363.282225
23:47:30 (2422528): called boinc_finish(0)

</stderr_txt>
]]>

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