Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:46:09 (1120390): wrapper (7.7.26015): starting
03:46:09 (1120390): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 03:46:09] Arguments: --nthreads 4
[2024-06-22 03:46:09] Threads: 4
[2024-06-22 03:46:09] Checking for CVMFS
[2024-06-22 03:46:09] No cvmfs_config command found, will try listing directly
[2024-06-22 03:46:09] CVMFS is ok
[2024-06-22 03:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 03:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 03:46:09] Further information can be found at the LHC@home message board.
[2024-06-22 03:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 03:46:09] Checking for apptainer binary...
[2024-06-22 03:46:09] which: no apptainer in ((null))
[2024-06-22 03:46:09] apptainer is not installed, using version from CVMFS
[2024-06-22 03:46:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 03:46:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-22 03:46:09] apptainer works
[2024-06-22 03:46:10] Set ATHENA_PROC_NUMBER=4
[2024-06-22 03:46:10] Set ATHENA_CORE_NUMBER=4
[2024-06-22 03:46:10] Starting ATLAS job with PandaID=6238889419
[2024-06-22 03:46:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 07:56:59]  *** The last 200 lines of the pilot log: ***
[2024-06-22 07:56:59] 2024-06-22 05:56:44,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 07:56:59] 2024-06-22 05:56:44,102 | INFO     | fitting pss+swap vs Time
[2024-06-22 07:56:59] 2024-06-22 05:56:44,102 | INFO     | model: linear, x: [1719020828.0, 1719020889.0, 1719020950.0, 1719021011.0, 1719021072.0, 1719021133.0, 1719021194.0, 1719021255.0, 1719021316.0, 1719021377.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,102 | INFO     | sum of square deviations: 4616114457.5
[2024-06-22 07:56:59] 2024-06-22 05:56:44,104 | INFO     | sum of deviations: 105455421491.50002
[2024-06-22 07:56:59] 2024-06-22 05:56:44,104 | INFO     | mean x: 1719028300.5
[2024-06-22 07:56:59] 2024-06-22 05:56:44,104 | INFO     | mean y: 2302766.7032520324
[2024-06-22 07:56:59] 2024-06-22 05:56:44,105 | INFO     | -- intersect: -39269005528.2004
[2024-06-22 07:56:59] 2024-06-22 05:56:44,105 | INFO     | intersect: -39269005528.2004
[2024-06-22 07:56:59] 2024-06-22 05:56:44,105 | INFO     | chi2: 4.925874043761378
[2024-06-22 07:56:59] 2024-06-22 05:56:44,105 | INFO     | model: linear, x: [1719020828.0, 1719020889.0, 1719020950.0, 1719021011.0, 1719021072.0, 1719021133.0, 1719021194.0, 1719021255.0, 1719021316.0, 1719021377.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,106 | INFO     | sum of square deviations: 4340323240.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,107 | INFO     | sum of deviations: 118890612108.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,107 | INFO     | mean x: 1719028148.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | mean y: 2310051.1659751036
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | -- intersect: -47085498262.991196
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | intersect: -47085498262.991196
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | chi2: 4.129089979988162
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | current chi2=4.129089979988162 (change=16.175485948170827 %)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,108 | INFO     | right removable region: 240
[2024-06-22 07:56:59] 2024-06-22 05:56:44,109 | INFO     | model: linear, x: [1719021133.0, 1719021194.0, 1719021255.0, 1719021316.0, 1719021377.0, 1719021438.0, 1719021499.0, 1719021560.0, 1719021621.0, 1719021682.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,109 | INFO     | sum of square deviations: 4340323240.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,110 | INFO     | sum of deviations: 46964503960.99999
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | mean x: 1719028453.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | mean y: 2335034.0954356845
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | -- intersect: -18598426735.43355
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | intersect: -18598426735.43355
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | chi2: 2.384954523140988
[2024-06-22 07:56:59] 2024-06-22 05:56:44,111 | INFO     | current chi2=2.384954523140988 (change=51.58312003203708 %)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,112 | INFO     | model: linear, x: [1719021438.0, 1719021499.0, 1719021560.0, 1719021621.0, 1719021682.0, 1719021743.0, 1719021804.0, 1719021865.0, 1719021926.0, 1719021987.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,112 | INFO     | sum of square deviations: 4075741535.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,113 | INFO     | sum of deviations: 343514789.9999943
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | mean x: 1719028605.5
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | mean y: 2361907.3220338984
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | -- intersect: -142522586.78814414
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | intersect: -142522586.78814414
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | chi2: 0.9083019205547062
[2024-06-22 07:56:59] 2024-06-22 05:56:44,114 | INFO     | current chi2=0.9083019205547062 (change=61.915335837998654 %)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,115 | INFO     | model: linear, x: [1719021743.0, 1719021804.0, 1719021865.0, 1719021926.0, 1719021987.0, 1719022048.0, 1719022109.0, 1719022170.0, 1719022231.0, 1719022292.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,115 | INFO     | sum of square deviations: 3822136780.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,116 | INFO     | sum of deviations: -6862725760.999999
[2024-06-22 07:56:59] 2024-06-22 05:56:44,116 | INFO     | mean x: 1719028758.0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | mean y: 2366189.8571428573
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | -- intersect: 3088917933.1535807
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | intersect: 3088917933.1535807
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | chi2: 0.8343997097204038
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | current chi2=0.8343997097204038 (change=8.136304587924883 %)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,117 | INFO     | left removable region: 30
[2024-06-22 07:56:59] 2024-06-22 05:56:44,118 | INFO     | model: linear, x: [1719022658.0, 1719022719.0, 1719022780.0, 1719022841.0, 1719022902.0, 1719022963.0, 1719023024.0, 1719023085.0, 1719023146.0, 1719023207.0, 1719
[2024-06-22 07:56:59] 2024-06-22 05:56:44,118 | INFO     | sum of square deviations: 2871616632.5
[2024-06-22 07:56:59] 2024-06-22 05:56:44,119 | INFO     | sum of deviations: 5651952194.000001
[2024-06-22 07:56:59] 2024-06-22 05:56:44,119 | INFO     | mean x: 1719029032.5
[2024-06-22 07:56:59] 2024-06-22 05:56:44,119 | INFO     | mean y: 2376954.495238095
[2024-06-22 07:56:59] 2024-06-22 05:56:44,120 | INFO     | -- intersect: -3381037740.149965
[2024-06-22 07:56:59] 2024-06-22 05:56:44,120 | INFO     | intersect: -3381037740.149965
[2024-06-22 07:56:59] 2024-06-22 05:56:44,120 | INFO     | chi2: 0.0009069939102181962
[2024-06-22 07:56:59] 2024-06-22 05:56:44,120 | INFO     | -- intersect: -3381037740.149965
[2024-06-22 07:56:59] 2024-06-22 05:56:44,120 | INFO     | current memory leak: 1.97 B/s (using 210 data points, chi2=0.00)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | ..............................
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . Timing measurements:
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . get job = 0 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . initial setup = 1 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . payload setup = 12 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . stage-in = 0 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . payload execution = 14963 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . stage-out = 1 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | . log creation = 0 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,121 | INFO     | ..............................
[2024-06-22 07:56:59] 2024-06-22 05:56:44,227 | INFO     | 
[2024-06-22 07:56:59] 2024-06-22 05:56:44,227 | INFO     | job summary report
[2024-06-22 07:56:59] 2024-06-22 05:56:44,227 | INFO     | --------------------------------------------------
[2024-06-22 07:56:59] 2024-06-22 05:56:44,227 | INFO     | PanDA job id: 6238889419
[2024-06-22 07:56:59] 2024-06-22 05:56:44,227 | INFO     | task id: 40024058
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | errors: (none)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | pilot state: finished 
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | transexitcode: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | exeerrorcode: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | exeerrordiag: 
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | exitcode: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | exitmsg: OK
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | cpuconsumptiontime: 56584 s
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | nevents: 400
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | neventsw: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | pid: 1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:44,228 | INFO     | pgrp: 1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | corecount: 4
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | event service: False
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | sizes: {0: 2386959, 1: 2386959, 9: 2387193, 11: 2387221, 14979: 2417878, 14980: 2417877, 14981: 2427099, 14996: 2427213}
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | --------------------------------------------------
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | 
[2024-06-22 07:56:59] 2024-06-22 05:56:44,229 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-06-22 07:56:59] 2024-06-22 05:56:44,255 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 07:56:59] 2024-06-22 05:56:44,257 | INFO     | job 6238889419 has completed (purged errors)
[2024-06-22 07:56:59] 2024-06-22 05:56:44,258 | INFO     | overall cleanup function is called
[2024-06-22 07:56:59] 2024-06-22 05:56:45,265 | INFO     | --- collectZombieJob: --- 10, [1137172]
[2024-06-22 07:56:59] 2024-06-22 05:56:45,265 | INFO     | zombie collector waiting for pid 1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:45,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 07:56:59] 2024-06-22 05:56:46,270 | INFO     | collected zombie processes
[2024-06-22 07:56:59] 2024-06-22 05:56:46,270 | INFO     | will now attempt to kill all subprocesses of pid=1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:46,561 | INFO     | process IDs to be killed: [1137172] (in reverse order)
[2024-06-22 07:56:59] 2024-06-22 05:56:46,776 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 07:56:59] 2024-06-22 05:56:46,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 07:56:59] 2024-06-22 05:56:46,793 | INFO     | did not find any defunct processes belonging to 1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:46,803 | INFO     | did not find any defunct processes belonging to 1137172
[2024-06-22 07:56:59] 2024-06-22 05:56:46,803 | INFO     | ready for new job
[2024-06-22 07:56:59] 2024-06-22 05:56:46,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 07:56:59] 2024-06-22 05:56:46,805 | INFO     | *************************************
[2024-06-22 07:56:59] 2024-06-22 05:56:46,805 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 07:56:59] 2024-06-22 05:56:46,805 | INFO     | *************************************
[2024-06-22 07:56:59] 2024-06-22 05:56:46,805 | INFO     | 
[2024-06-22 07:56:59] 2024-06-22 05:56:46,810 | INFO     | architecture information:
[2024-06-22 07:56:59] 2024-06-22 05:56:46,810 | INFO     | executing command: cat /etc/os-release
[2024-06-22 07:56:59] 2024-06-22 05:56:46,834 | INFO     | cat /etc/os-release:
[2024-06-22 07:56:59] NAME="CentOS Linux"
[2024-06-22 07:56:59] VERSION="7 (Core)"
[2024-06-22 07:56:59] ID="centos"
[2024-06-22 07:56:59] ID_LIKE="rhel fedora"
[2024-06-22 07:56:59] VERSION_ID="7"
[2024-06-22 07:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 07:56:59] ANSI_COLOR="0;31"
[2024-06-22 07:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 07:56:59] HOME_URL="https://www.centos.org/"
[2024-06-22 07:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 07:56:59] 
[2024-06-22 07:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 07:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 07:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 07:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 07:56:59] 
[2024-06-22 07:56:59] 2024-06-22 05:56:46,834 | INFO     | *************************************
[2024-06-22 07:56:59] 2024-06-22 05:56:47,337 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-06-22 07:56:59] 2024-06-22 05:56:47,363 | INFO     | sufficient remaining disk space (3161468174336 B)
[2024-06-22 07:56:59] 2024-06-22 05:56:47,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 07:56:59] 2024-06-22 05:56:47,364 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 07:56:59] 2024-06-22 05:56:47,456 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 07:56:59] 2024-06-22 05:56:47,456 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 07:56:59] 2024-06-22 05:56:47,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:56:59] 2024-06-22 05:56:47,457 | INFO     | will abort loop
[2024-06-22 07:56:59] 2024-06-22 05:56:47,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 07:56:59] 2024-06-22 05:56:47,791 | INFO     | all data control threads have been joined
[2024-06-22 07:56:59] 2024-06-22 05:56:47,877 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 07:56:59] 2024-06-22 05:56:47,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 07:56:59] 2024-06-22 05:56:47,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 07:56:59] 2024-06-22 05:56:48,265 | INFO     | all job control threads have been joined
[2024-06-22 07:56:59] 2024-06-22 05:56:48,368 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:48,369 | INFO     | [job] retrieve thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:48,448 | INFO     | all payload control threads have been joined
[2024-06-22 07:56:59] 2024-06-22 05:56:48,461 | INFO     | [job] job monitor thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:48,767 | INFO     | [payload] failed_post thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:48,796 | INFO     | [data] control thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 07:56:59] 2024-06-22 05:56:49,207 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:56:59] 2024-06-22 05:56:49,270 | INFO     | [job] control thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,453 | INFO     | [payload] control thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,500 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,501 | INFO     | [data] copytool_out thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,644 | INFO     | [job] validate thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,661 | INFO     | [data] copytool_in thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,672 | INFO     | [payload] validate_post thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:49,834 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:50,241 | INFO     | [job] queue monitor thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:53,119 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 07:56:59] 2024-06-22 05:56:53,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47871488422976)>', '<ExcThread(monitor, started 47871685506816)>']
[2024-06-22 07:56:59] 2024-06-22 05:56:53,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 07:56:59] 2024-06-22 05:56:53,910 | INFO     | [monitor] control thread has ended
[2024-06-22 07:56:59] 2024-06-22 05:56:58,426 | INFO     | all workflow threads have been joined
[2024-06-22 07:56:59] 2024-06-22 05:56:58,426 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 07:56:59] 2024-06-22 05:56:58,427 | INFO     | traces error code: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:58,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 07:56:59] 2024-06-22 05:56:58,584 [wrapper] ==== pilot stdout END ====
[2024-06-22 07:56:59] 2024-06-22 05:56:58,587 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 07:56:59] 2024-06-22 05:56:58,590 [wrapper] pilotpid: 1127461
[2024-06-22 07:56:59] 2024-06-22 05:56:58,593 [wrapper] Pilot exit status: 0
[2024-06-22 07:56:59] 2024-06-22 05:56:58,657 [wrapper] pandaids: 6238889419
[2024-06-22 07:56:59] 2024-06-22 05:56:58,771 [wrapper] cleanup supervisor_pilot 2568929 1127462
[2024-06-22 07:56:59] 2024-06-22 05:56:58,776 [wrapper] Test setup, not cleaning
[2024-06-22 07:56:59] 2024-06-22 05:56:58,783 [wrapper] ==== wrapper stdout END ====
[2024-06-22 07:56:59] 2024-06-22 05:56:58,791 [wrapper] ==== wrapper stderr END ====
[2024-06-22 07:56:59] 2024-06-22 05:56:58,810 [wrapper] apfmon messages muted
[2024-06-22 07:56:59]  *** Error codes and diagnostics ***
[2024-06-22 07:56:59]     "exeErrorCode": 0,
[2024-06-22 07:56:59]     "exeErrorDiag": "",
[2024-06-22 07:56:59]     "pilotErrorCode": 0,
[2024-06-22 07:56:59]     "pilotErrorDiag": "",
[2024-06-22 07:56:59]  *** Listing of results directory ***
[2024-06-22 07:56:59] total 875632
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-22 07:56:59] -rwx------ 1 boinc boinc     32308 Jun 20 17:14 runpilot2-wrapper.sh
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:14 queuedata.json
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc       100 Jun 22 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 07:56:59] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 03:46 run_atlas
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc       105 Jun 22 03:46 job.xml
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc      6642 Jun 22 03:46 init_data.xml
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc 610627261 Jun 22 03:46 EVNT.40024055._000035.pool.root.1
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc     17537 Jun 22 03:46 start_atlas.sh
[2024-06-22 07:56:59] drwxrwx--x 2 boinc boinc      4096 Jun 22 03:46 shared
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc    482498 Jun 22 03:46 input.tar.gz
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc         0 Jun 22 03:46 boinc_lockfile
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc      2561 Jun 22 03:46 pandaJob.out
[2024-06-22 07:56:59] -rw------- 1 boinc boinc       424 Jun 22 03:46 setup.sh.local
[2024-06-22 07:56:59] -rw------- 1 boinc boinc   1025953 Jun 22 03:46 agis_schedconf.cvmfs.json
[2024-06-22 07:56:59] -rw------- 1 boinc boinc   1321363 Jun 22 03:46 cric_ddmendpoints.json
[2024-06-22 07:56:59] drwx------ 4 boinc boinc      4096 Jun 22 03:46 pilot3
[2024-06-22 07:56:59] -rw------- 1 boinc boinc 278688598 Jun 22 07:55 HITS.40024058._000623.pool.root.1
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc       532 Jun 22 07:55 boinc_task_state.xml
[2024-06-22 07:56:59] -rw------- 1 boinc boinc        95 Jun 22 07:56 pilot_heartbeat.json
[2024-06-22 07:56:59] -rw------- 1 boinc boinc      1038 Jun 22 07:56 memory_monitor_summary.json
[2024-06-22 07:56:59] -rw------- 1 boinc boinc         0 Jun 22 07:56 agis_ddmendpoints.agis.ALL.json
[2024-06-22 07:56:59] -rw------- 1 boinc boinc    361109 Jun 22 07:56 log.40024058._000623.job.log.tgz.1
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc      8192 Jun 22 07:56 boinc_mmap_file
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc        28 Jun 22 07:56 wrapper_checkpoint.txt
[2024-06-22 07:56:59] -rw------- 1 boinc boinc      7709 Jun 22 07:56 heartbeat.json
[2024-06-22 07:56:59] -rw------- 1 boinc boinc      4408 Jun 22 07:56 pilotlog.txt
[2024-06-22 07:56:59] -rw------- 1 boinc boinc   1534570 Jun 22 07:56 log.40024058._000623.job.log.1
[2024-06-22 07:56:59] -rw------- 1 boinc boinc       357 Jun 22 07:56 output.list
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc       620 Jun 22 07:56 runtime_log
[2024-06-22 07:56:59] -rw------- 1 boinc boinc   1914880 Jun 22 07:56 result.tar.gz
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc     11410 Jun 22 07:56 runtime_log.err
[2024-06-22 07:56:59] -rw------- 1 boinc boinc       657 Jun 22 07:56 2FUMDmpfYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmgNXKDm2T6xDo.diag
[2024-06-22 07:56:59] -rw-r--r-- 1 boinc boinc     21326 Jun 22 07:56 stderr.txt
[2024-06-22 07:56:59] HITS file was successfully produced:
[2024-06-22 07:56:59] -rw------- 1 boinc boinc 278688598 Jun 22 07:55 shared/HITS.pool.root.1
[2024-06-22 07:56:59]  *** Contents of shared directory: ***
[2024-06-22 07:56:59] total 870848
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc 610627261 Jun 22 03:46 ATLAS.root_0
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc     17537 Jun 22 03:46 start_atlas.sh
[2024-06-22 07:56:59] -rw-r--r-- 2 boinc boinc    482498 Jun 22 03:46 input.tar.gz
[2024-06-22 07:56:59] -rw------- 1 boinc boinc 278688598 Jun 22 07:55 HITS.pool.root.1
[2024-06-22 07:56:59] -rw------- 1 boinc boinc   1914880 Jun 22 07:56 result.tar.gz
07:57:00 (1120390): run_atlas exited; CPU time 56233.806845
07:57:00 (1120390): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN