Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:51 (217640): wrapper (7.7.26015): starting
20:46:51 (217640): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 20:46:52] Arguments: --nthreads 4
[2024-06-21 20:46:52] Threads: 4
[2024-06-21 20:46:52] Checking for CVMFS
[2024-06-21 20:46:52] No cvmfs_config command found, will try listing directly
[2024-06-21 20:46:52] CVMFS is ok
[2024-06-21 20:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 20:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 20:46:52] Further information can be found at the LHC@home message board.
[2024-06-21 20:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 20:46:52] Checking for apptainer binary...
[2024-06-21 20:46:52] which: no apptainer in ((null))
[2024-06-21 20:46:52] apptainer is not installed, using version from CVMFS
[2024-06-21 20:46:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 20:46:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-21 20:46:53] apptainer works
[2024-06-21 20:46:53] Set ATHENA_PROC_NUMBER=4
[2024-06-21 20:46:53] Set ATHENA_CORE_NUMBER=4
[2024-06-21 20:46:53] Starting ATLAS job with PandaID=6238889377
[2024-06-21 20:46:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 00:42:28]  *** The last 200 lines of the pilot log: ***
[2024-06-22 00:42:28] 2024-06-21 22:42:11,059 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 00:42:28] 2024-06-21 22:42:11,064 | INFO     | fitting pss+swap vs Time
[2024-06-22 00:42:28] 2024-06-21 22:42:11,064 | INFO     | model: linear, x: [1718995673.0, 1718995734.0, 1718995795.0, 1718995856.0, 1718995917.0, 1718995978.0, 1718996039.0, 1718996100.0, 1718996161.0, 1718996222.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,065 | INFO     | sum of square deviations: 3822136780.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,066 | INFO     | sum of deviations: 93627207128.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | mean x: 1719002688.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | mean y: 2294438.2164502162
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | -- intersect: -42106460425.06837
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | intersect: -42106460425.06837
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | chi2: 4.8951543198687295
[2024-06-22 00:42:28] 2024-06-21 22:42:11,067 | INFO     | model: linear, x: [1718995673.0, 1718995734.0, 1718995795.0, 1718995856.0, 1718995917.0, 1718995978.0, 1718996039.0, 1718996100.0, 1718996161.0, 1718996222.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,068 | INFO     | sum of square deviations: 3579276412.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,069 | INFO     | sum of deviations: 105940626776.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,069 | INFO     | mean x: 1719002535.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,069 | INFO     | mean y: 2302006.0663716816
[2024-06-22 00:42:28] 2024-06-21 22:42:11,069 | INFO     | -- intersect: -50877313048.324936
[2024-06-22 00:42:28] 2024-06-21 22:42:11,069 | INFO     | intersect: -50877313048.324936
[2024-06-22 00:42:28] 2024-06-21 22:42:11,070 | INFO     | chi2: 4.103035810927746
[2024-06-22 00:42:28] 2024-06-21 22:42:11,070 | INFO     | current chi2=4.103035810927746 (change=16.181686156979534 %)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,070 | INFO     | right removable region: 225
[2024-06-22 00:42:28] 2024-06-21 22:42:11,070 | INFO     | model: linear, x: [1718995978.0, 1718996039.0, 1718996100.0, 1718996161.0, 1718996222.0, 1718996283.0, 1718996344.0, 1718996405.0, 1718996466.0, 1718996527.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,070 | INFO     | sum of square deviations: 3579276412.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,072 | INFO     | sum of deviations: 39183259659.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,072 | INFO     | mean x: 1719002840.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,072 | INFO     | mean y: 2328539.9115044246
[2024-06-22 00:42:28] 2024-06-21 22:42:11,072 | INFO     | -- intersect: -18816037769.725967
[2024-06-22 00:42:28] 2024-06-21 22:42:11,072 | INFO     | intersect: -18816037769.725967
[2024-06-22 00:42:28] 2024-06-21 22:42:11,073 | INFO     | chi2: 2.3614527379747994
[2024-06-22 00:42:28] 2024-06-21 22:42:11,073 | INFO     | current chi2=2.3614527379747994 (change=51.759381141673074 %)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,073 | INFO     | model: linear, x: [1718996283.0, 1718996344.0, 1718996405.0, 1718996466.0, 1718996527.0, 1718996588.0, 1718996649.0, 1718996710.0, 1718996771.0, 1718996832.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,073 | INFO     | sum of square deviations: 3346927870.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,075 | INFO     | sum of deviations: -4200266508.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,075 | INFO     | mean x: 1719002993.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,075 | INFO     | mean y: 2357016.479638009
[2024-06-22 00:42:28] 2024-06-21 22:42:11,075 | INFO     | -- intersect: 2159640047.096506
[2024-06-22 00:42:28] 2024-06-21 22:42:11,075 | INFO     | intersect: 2159640047.096506
[2024-06-22 00:42:28] 2024-06-21 22:42:11,076 | INFO     | chi2: 0.8901927525786024
[2024-06-22 00:42:28] 2024-06-21 22:42:11,076 | INFO     | current chi2=0.8901927525786024 (change=62.30317303144341 %)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,076 | INFO     | model: linear, x: [1718996588.0, 1718996649.0, 1718996710.0, 1718996771.0, 1718996832.0, 1718996893.0, 1718996954.0, 1718997015.0, 1718997076.0, 1718997137.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,076 | INFO     | sum of square deviations: 3124858590.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,077 | INFO     | sum of deviations: -9857220397.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | mean x: 1719003145.5
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | mean y: 2360852.074074074
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | -- intersect: 5424875945.254581
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | intersect: 5424875945.254581
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | chi2: 0.83420263062905
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | current chi2=0.83420263062905 (change=6.28966274858642 %)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,078 | INFO     | left removable region: 30
[2024-06-22 00:42:28] 2024-06-21 22:42:11,079 | INFO     | model: linear, x: [1718997503.0, 1718997564.0, 1718997625.0, 1718997686.0, 1718997747.0, 1718997808.0, 1718997869.0, 1718997930.0, 1718997991.0, 1718998052.0, 1718
[2024-06-22 00:42:28] 2024-06-21 22:42:11,079 | INFO     | sum of square deviations: 2299168690.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | sum of deviations: 4829844153.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | mean x: 1719003420.0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | mean y: 2369654.2871794873
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | -- intersect: -3608726240.1484756
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | intersect: -3608726240.1484756
[2024-06-22 00:42:28] 2024-06-21 22:42:11,080 | INFO     | chi2: 0.00029768517162936383
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | -- intersect: -3608726240.1484756
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | current memory leak: 2.10 B/s (using 195 data points, chi2=0.00)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | ..............................
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . Timing measurements:
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . get job = 0 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . initial setup = 1 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . payload setup = 13 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . stage-in = 0 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,081 | INFO     | . payload execution = 14046 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,082 | INFO     | . stage-out = 1 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,082 | INFO     | . log creation = 0 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,082 | INFO     | ..............................
[2024-06-22 00:42:28] 2024-06-21 22:42:11,357 | WARNING  | process 235476 is no longer using CPU - aborting
[2024-06-22 00:42:28] 2024-06-21 22:42:11,357 | INFO     | aborting job monitoring since job object (job id=6238889377) has expired
[2024-06-22 00:42:28] 2024-06-21 22:42:11,592 | INFO     | 
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | job summary report
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | --------------------------------------------------
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | PanDA job id: 6238889377
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | task id: 40024058
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | errors: (none)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | pilot state: finished 
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | transexitcode: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | exeerrorcode: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | exeerrordiag: 
[2024-06-22 00:42:28] 2024-06-21 22:42:11,593 | INFO     | exitcode: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | exitmsg: OK
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | cpuconsumptiontime: 52930 s
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | nevents: 400
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | neventsw: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | pid: 235476
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | pgrp: 235476
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | corecount: 4
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | event service: False
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | sizes: {0: 2386730, 1: 2386929, 9: 2387135, 11: 2387163, 14064: 2417479, 14066: 2426647, 14079: 2426761}
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | --------------------------------------------------
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | 
[2024-06-22 00:42:28] 2024-06-21 22:42:11,594 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-06-22 00:42:28] 2024-06-21 22:42:11,620 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,620 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,620 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,622 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,622 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 00:42:28] 2024-06-21 22:42:11,622 | INFO     | job 6238889377 has completed (purged errors)
[2024-06-22 00:42:28] 2024-06-21 22:42:11,622 | INFO     | overall cleanup function is called
[2024-06-22 00:42:28] 2024-06-21 22:42:12,629 | INFO     | --- collectZombieJob: --- 10, [235476]
[2024-06-22 00:42:28] 2024-06-21 22:42:12,630 | INFO     | zombie collector waiting for pid 235476
[2024-06-22 00:42:28] 2024-06-21 22:42:12,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 00:42:28] 2024-06-21 22:42:13,634 | INFO     | collected zombie processes
[2024-06-22 00:42:28] 2024-06-21 22:42:13,635 | INFO     | will now attempt to kill all subprocesses of pid=235476
[2024-06-22 00:42:28] 2024-06-21 22:42:13,899 | INFO     | process IDs to be killed: [235476] (in reverse order)
[2024-06-22 00:42:28] 2024-06-21 22:42:14,123 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 00:42:28] 2024-06-21 22:42:14,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 00:42:28] 2024-06-21 22:42:14,141 | INFO     | did not find any defunct processes belonging to 235476
[2024-06-22 00:42:28] 2024-06-21 22:42:14,158 | INFO     | did not find any defunct processes belonging to 235476
[2024-06-22 00:42:28] 2024-06-21 22:42:14,159 | INFO     | ready for new job
[2024-06-22 00:42:28] 2024-06-21 22:42:14,159 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 00:42:28] 2024-06-21 22:42:14,161 | INFO     | *************************************
[2024-06-22 00:42:28] 2024-06-21 22:42:14,161 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 00:42:28] 2024-06-21 22:42:14,161 | INFO     | *************************************
[2024-06-22 00:42:28] 2024-06-21 22:42:14,161 | INFO     | 
[2024-06-22 00:42:28] 2024-06-21 22:42:14,169 | INFO     | architecture information:
[2024-06-22 00:42:28] 2024-06-21 22:42:14,169 | INFO     | executing command: cat /etc/os-release
[2024-06-22 00:42:28] 2024-06-21 22:42:14,183 | INFO     | cat /etc/os-release:
[2024-06-22 00:42:28] NAME="CentOS Linux"
[2024-06-22 00:42:28] VERSION="7 (Core)"
[2024-06-22 00:42:28] ID="centos"
[2024-06-22 00:42:28] ID_LIKE="rhel fedora"
[2024-06-22 00:42:28] VERSION_ID="7"
[2024-06-22 00:42:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 00:42:28] ANSI_COLOR="0;31"
[2024-06-22 00:42:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 00:42:28] HOME_URL="https://www.centos.org/"
[2024-06-22 00:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 00:42:28] 
[2024-06-22 00:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 00:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 00:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 00:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 00:42:28] 
[2024-06-22 00:42:28] 2024-06-21 22:42:14,183 | INFO     | *************************************
[2024-06-22 00:42:28] 2024-06-21 22:42:14,685 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-06-22 00:42:28] 2024-06-21 22:42:14,707 | INFO     | sufficient remaining disk space (3159131947008 B)
[2024-06-22 00:42:28] 2024-06-21 22:42:14,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 00:42:28] 2024-06-21 22:42:14,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 00:42:28] 2024-06-21 22:42:14,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 00:42:28] 2024-06-21 22:42:14,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 00:42:28] 2024-06-21 22:42:14,865 | INFO     | aborting loop
[2024-06-22 00:42:28] 2024-06-21 22:42:15,007 | INFO     | all payload control threads have been joined
[2024-06-22 00:42:28] 2024-06-21 22:42:15,254 | INFO     | all data control threads have been joined
[2024-06-22 00:42:28] 2024-06-21 22:42:15,546 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 00:42:28] 2024-06-21 22:42:15,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 00:42:28] 2024-06-21 22:42:15,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 00:42:28] 2024-06-21 22:42:15,712 | INFO     | [job] retrieve thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:15,869 | INFO     | [job] job monitor thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,012 | INFO     | [payload] control thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,037 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,113 | INFO     | [data] copytool_in thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,175 | INFO     | all job control threads have been joined
[2024-06-22 00:42:28] 2024-06-21 22:42:16,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 00:42:28] 2024-06-21 22:42:16,237 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,259 | INFO     | [data] control thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,296 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,628 | INFO     | [payload] validate_post thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,713 | INFO     | [data] copytool_out thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,933 | INFO     | [payload] failed_post thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,989 | INFO     | [job] validate thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:16,997 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:17,180 | INFO     | [job] control thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:17,204 | INFO     | [job] queue monitor thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:17,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 00:42:28] 2024-06-21 22:42:21,956 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 00:42:28] 2024-06-21 22:42:22,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47873352004672)>', '<ExcThread(monitor, started 47873532278528)>']
[2024-06-22 00:42:28] 2024-06-21 22:42:23,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 00:42:28] 2024-06-21 22:42:23,587 | INFO     | [monitor] control thread has ended
[2024-06-22 00:42:28] 2024-06-21 22:42:27,726 | INFO     | all workflow threads have been joined
[2024-06-22 00:42:28] 2024-06-21 22:42:27,727 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 00:42:28] 2024-06-21 22:42:27,727 | INFO     | traces error code: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:27,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 00:42:28] 2024-06-21 22:42:27,874 [wrapper] ==== pilot stdout END ====
[2024-06-22 00:42:28] 2024-06-21 22:42:27,877 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 00:42:28] 2024-06-21 22:42:27,880 [wrapper] pilotpid: 223425
[2024-06-22 00:42:28] 2024-06-21 22:42:27,882 [wrapper] Pilot exit status: 0
[2024-06-22 00:42:28] 2024-06-21 22:42:27,893 [wrapper] pandaids: 6238889377
[2024-06-22 00:42:28] 2024-06-21 22:42:27,998 [wrapper] cleanup supervisor_pilot 1283902 223426
[2024-06-22 00:42:28] 2024-06-21 22:42:28,018 [wrapper] Test setup, not cleaning
[2024-06-22 00:42:28] 2024-06-21 22:42:28,023 [wrapper] ==== wrapper stdout END ====
[2024-06-22 00:42:28] 2024-06-21 22:42:28,037 [wrapper] ==== wrapper stderr END ====
[2024-06-22 00:42:28] 2024-06-21 22:42:28,076 [wrapper] apfmon messages muted
[2024-06-22 00:42:28]  *** Error codes and diagnostics ***
[2024-06-22 00:42:28]     "exeErrorCode": 0,
[2024-06-22 00:42:28]     "exeErrorDiag": "",
[2024-06-22 00:42:28]     "pilotErrorCode": 0,
[2024-06-22 00:42:28]     "pilotErrorDiag": "",
[2024-06-22 00:42:28]  *** Listing of results directory ***
[2024-06-22 00:42:28] total 871676
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:12 queuedata.json
[2024-06-22 00:42:28] -rwx------ 1 boinc boinc     32308 Jun 20 17:12 runpilot2-wrapper.sh
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc       100 Jun 21 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 00:42:28] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 20:46 run_atlas
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc       105 Jun 21 20:46 job.xml
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc      6644 Jun 21 20:46 init_data.xml
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc 613418615 Jun 21 20:46 EVNT.40024055._000034.pool.root.1
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 20:46 start_atlas.sh
[2024-06-22 00:42:28] drwxrwx--x 2 boinc boinc      4096 Jun 21 20:46 shared
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc    482500 Jun 21 20:46 input.tar.gz
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc         0 Jun 21 20:46 boinc_lockfile
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc      2552 Jun 21 20:46 pandaJob.out
[2024-06-22 00:42:28] -rw------- 1 boinc boinc       424 Jun 21 20:46 setup.sh.local
[2024-06-22 00:42:28] -rw------- 1 boinc boinc   1025648 Jun 21 20:47 agis_schedconf.cvmfs.json
[2024-06-22 00:42:28] -rw------- 1 boinc boinc   1321363 Jun 21 20:47 cric_ddmendpoints.json
[2024-06-22 00:42:28] drwx------ 4 boinc boinc      4096 Jun 21 20:47 pilot3
[2024-06-22 00:42:28] -rw------- 1 boinc boinc 272215869 Jun 22 00:41 HITS.40024058._000581.pool.root.1
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc       531 Jun 22 00:41 boinc_task_state.xml
[2024-06-22 00:42:28] -rw------- 1 boinc boinc      1037 Jun 22 00:41 memory_monitor_summary.json
[2024-06-22 00:42:28] -rw------- 1 boinc boinc         0 Jun 22 00:41 agis_ddmendpoints.agis.ALL.json
[2024-06-22 00:42:28] -rw------- 1 boinc boinc    328177 Jun 22 00:41 log.40024058._000581.job.log.tgz.1
[2024-06-22 00:42:28] -rw------- 1 boinc boinc        95 Jun 22 00:42 pilot_heartbeat.json
[2024-06-22 00:42:28] -rw------- 1 boinc boinc      7712 Jun 22 00:42 heartbeat.json
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc      8192 Jun 22 00:42 boinc_mmap_file
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc        28 Jun 22 00:42 wrapper_checkpoint.txt
[2024-06-22 00:42:28] -rw------- 1 boinc boinc      4223 Jun 22 00:42 pilotlog.txt
[2024-06-22 00:42:28] -rw------- 1 boinc boinc   1383422 Jun 22 00:42 log.40024058._000581.job.log.1
[2024-06-22 00:42:28] -rw------- 1 boinc boinc       357 Jun 22 00:42 output.list
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc       620 Jun 22 00:42 runtime_log
[2024-06-22 00:42:28] -rw------- 1 boinc boinc   1730560 Jun 22 00:42 result.tar.gz
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc     11429 Jun 22 00:42 runtime_log.err
[2024-06-22 00:42:28] -rw------- 1 boinc boinc       657 Jun 22 00:42 4zGODmAeYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmDNlKDm8mJSPo.diag
[2024-06-22 00:42:28] -rw-r--r-- 1 boinc boinc     21288 Jun 22 00:42 stderr.txt
[2024-06-22 00:42:28] HITS file was successfully produced:
[2024-06-22 00:42:28] -rw------- 1 boinc boinc 272215869 Jun 22 00:41 shared/HITS.pool.root.1
[2024-06-22 00:42:28]  *** Contents of shared directory: ***
[2024-06-22 00:42:28] total 867072
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc 613418615 Jun 21 20:46 ATLAS.root_0
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 20:46 start_atlas.sh
[2024-06-22 00:42:28] -rw-r--r-- 2 boinc boinc    482500 Jun 21 20:46 input.tar.gz
[2024-06-22 00:42:28] -rw------- 1 boinc boinc 272215869 Jun 22 00:41 HITS.pool.root.1
[2024-06-22 00:42:28] -rw------- 1 boinc boinc   1730560 Jun 22 00:42 result.tar.gz
00:42:30 (217640): run_atlas exited; CPU time 52632.744453
00:42:30 (217640): called boinc_finish(0)

</stderr_txt>
]]>

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