Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:38:30 (476014): wrapper (7.7.26015): starting
21:38:30 (476014): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 21:38:30] Arguments: --nthreads 4
[2024-06-21 21:38:30] Threads: 4
[2024-06-21 21:38:30] Checking for CVMFS
[2024-06-21 21:38:30] No cvmfs_config command found, will try listing directly
[2024-06-21 21:38:30] CVMFS is ok
[2024-06-21 21:38:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 21:38:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 21:38:30] Further information can be found at the LHC@home message board.
[2024-06-21 21:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 21:38:30] Checking for apptainer binary...
[2024-06-21 21:38:30] which: no apptainer in ((null))
[2024-06-21 21:38:30] apptainer is not installed, using version from CVMFS
[2024-06-21 21:38:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 21:38:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-21 21:38:31] apptainer works
[2024-06-21 21:38:31] Set ATHENA_PROC_NUMBER=4
[2024-06-21 21:38:31] Set ATHENA_CORE_NUMBER=4
[2024-06-21 21:38:31] Starting ATLAS job with PandaID=6238882775
[2024-06-21 21:38:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 05:22:51]  *** The last 200 lines of the pilot log: ***
[2024-06-22 05:22:51] 2024-06-22 03:22:29,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 05:22:51] 2024-06-22 03:22:29,745 | INFO     | fitting pss+swap vs Time
[2024-06-22 05:22:51] 2024-06-22 03:22:29,746 | INFO     | model: linear, x: [1718998753.0, 1718998814.0, 1718998875.0, 1718998936.0, 1718998997.0, 1718999058.0, 1718999119.0, 1718999180.0, 1718999241.0, 1718999302.0, 1718
[2024-06-22 05:22:51] 2024-06-22 03:22:29,746 | INFO     | sum of square deviations: 29401593130.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | sum of deviations: 236286735531.5
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | mean x: 1719012630.5
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | mean y: 2341518.067982456
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | -- intersect: -13812552151.207878
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | intersect: -13812552151.207878
[2024-06-22 05:22:51] 2024-06-22 03:22:29,749 | INFO     | chi2: 4.994098737699105
[2024-06-22 05:22:51] 2024-06-22 03:22:29,750 | INFO     | model: linear, x: [1718998753.0, 1718998814.0, 1718998875.0, 1718998936.0, 1718998997.0, 1718999058.0, 1718999119.0, 1718999180.0, 1718999241.0, 1718999302.0, 1718
[2024-06-22 05:22:51] 2024-06-22 03:22:29,750 | INFO     | sum of square deviations: 28444998450.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,752 | INFO     | sum of deviations: 262691413332.00003
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | mean x: 1719012478.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | mean y: 2345685.534368071
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | -- intersect: -15872846509.498554
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | intersect: -15872846509.498554
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | chi2: 4.195628250577956
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | current chi2=4.195628250577956 (change=15.988279949167012 %)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | right removable region: 450
[2024-06-22 05:22:51] 2024-06-22 03:22:29,753 | INFO     | model: linear, x: [1718999058.0, 1718999119.0, 1718999180.0, 1718999241.0, 1718999302.0, 1718999363.0, 1718999424.0, 1718999485.0, 1718999546.0, 1718999607.0, 1718
[2024-06-22 05:22:51] 2024-06-22 03:22:29,754 | INFO     | sum of square deviations: 28444998450.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,756 | INFO     | sum of deviations: 125115125003.00038
[2024-06-22 05:22:51] 2024-06-22 03:22:29,756 | INFO     | mean x: 1719012783.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,757 | INFO     | mean y: 2359219.937915743
[2024-06-22 05:22:51] 2024-06-22 03:22:29,757 | INFO     | -- intersect: -7558706378.460827
[2024-06-22 05:22:51] 2024-06-22 03:22:29,757 | INFO     | intersect: -7558706378.460827
[2024-06-22 05:22:51] 2024-06-22 03:22:29,757 | INFO     | chi2: 2.470450341780973
[2024-06-22 05:22:51] 2024-06-22 03:22:29,757 | INFO     | current chi2=2.470450341780973 (change=50.53260915463667 %)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,758 | INFO     | model: linear, x: [1718999363.0, 1718999424.0, 1718999485.0, 1718999546.0, 1718999607.0, 1718999668.0, 1718999729.0, 1718999790.0, 1718999851.0, 1718999912.0, 1718
[2024-06-22 05:22:51] 2024-06-22 03:22:29,758 | INFO     | sum of square deviations: 27509380907.5
[2024-06-22 05:22:51] 2024-06-22 03:22:29,760 | INFO     | sum of deviations: 33738764622.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,760 | INFO     | mean x: 1719012935.5
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | mean y: 2374114.053811659
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | -- intersect: -2105902077.54873
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | intersect: -2105902077.54873
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | chi2: 0.897938052385258
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | current chi2=0.897938052385258 (change=63.6528596750532 %)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | model: linear, x: [1718999668.0, 1718999729.0, 1718999790.0, 1718999851.0, 1718999912.0, 1718999973.0, 1719000034.0, 1719000095.0, 1719000156.0, 1719000217.0, 1719
[2024-06-22 05:22:51] 2024-06-22 03:22:29,761 | INFO     | sum of square deviations: 26594507940.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,764 | INFO     | sum of deviations: 14930135276.000011
[2024-06-22 05:22:51] 2024-06-22 03:22:29,764 | INFO     | mean x: 1719013088.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,764 | INFO     | mean y: 2377242.879818594
[2024-06-22 05:22:51] 2024-06-22 03:22:29,764 | INFO     | -- intersect: -962675316.203345
[2024-06-22 05:22:51] 2024-06-22 03:22:29,764 | INFO     | intersect: -962675316.203345
[2024-06-22 05:22:51] 2024-06-22 03:22:29,765 | INFO     | chi2: 0.8245505877770127
[2024-06-22 05:22:51] 2024-06-22 03:22:29,765 | INFO     | current chi2=0.8245505877770127 (change=8.172887251331074 %)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,765 | INFO     | left removable region: 30
[2024-06-22 05:22:51] 2024-06-22 03:22:29,765 | INFO     | model: linear, x: [1719000583.0, 1719000644.0, 1719000705.0, 1719000766.0, 1719000827.0, 1719000888.0, 1719000949.0, 1719001010.0, 1719001071.0, 1719001132.0, 1719
[2024-06-22 05:22:51] 2024-06-22 03:22:29,765 | INFO     | sum of square deviations: 22973323765.0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | sum of deviations: 34910096107.49999
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | mean x: 1719013362.5
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | mean y: 2383303.011904762
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | -- intersect: -2609816930.1288795
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | intersect: -2609816930.1288795
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | chi2: 0.0012069498011293219
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | -- intersect: -2609816930.1288795
[2024-06-22 05:22:51] 2024-06-22 03:22:29,768 | INFO     | current memory leak: 1.52 B/s (using 420 data points, chi2=0.00)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | ..............................
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . Timing measurements:
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . get job = 0 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . initial setup = 1 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . payload setup = 7 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . stage-in = 0 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . payload execution = 27784 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . stage-out = 1 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | . log creation = 0 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,769 | INFO     | ..............................
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | 
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | job summary report
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | --------------------------------------------------
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | PanDA job id: 6238882775
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | task id: 38920995
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | errors: (none)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 05:22:51] 2024-06-22 03:22:29,835 | INFO     | pilot state: finished 
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | transexitcode: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | exeerrorcode: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | exeerrordiag: 
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | exitcode: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | exitmsg: OK
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | cpuconsumptiontime: 107157 s
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | nevents: 400
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | neventsw: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | pid: 504285
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | pgrp: 504285
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | corecount: 4
[2024-06-22 05:22:51] 2024-06-22 03:22:29,836 | INFO     | event service: False
[2024-06-22 05:22:51] 2024-06-22 03:22:29,837 | INFO     | sizes: {0: 2386940, 1: 2387082, 7: 2387288, 11: 2387316, 27794: 2423729, 27796: 2432713, 27799: 2432897, 27809: 2433067}
[2024-06-22 05:22:51] 2024-06-22 03:22:29,837 | INFO     | --------------------------------------------------
[2024-06-22 05:22:51] 2024-06-22 03:22:29,837 | INFO     | 
[2024-06-22 05:22:51] 2024-06-22 03:22:29,837 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-22 05:22:51] 2024-06-22 03:22:29,863 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,864 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | job 6238882775 has completed (purged errors)
[2024-06-22 05:22:51] 2024-06-22 03:22:29,865 | INFO     | overall cleanup function is called
[2024-06-22 05:22:51] 2024-06-22 03:22:30,873 | INFO     | --- collectZombieJob: --- 10, [504285]
[2024-06-22 05:22:51] 2024-06-22 03:22:30,874 | INFO     | zombie collector waiting for pid 504285
[2024-06-22 05:22:51] 2024-06-22 03:22:30,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 05:22:51] 2024-06-22 03:22:31,878 | INFO     | collected zombie processes
[2024-06-22 05:22:51] 2024-06-22 03:22:31,879 | INFO     | will now attempt to kill all subprocesses of pid=504285
[2024-06-22 05:22:51] 2024-06-22 03:22:32,164 | INFO     | process IDs to be killed: [504285] (in reverse order)
[2024-06-22 05:22:51] 2024-06-22 03:22:32,381 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 05:22:51] 2024-06-22 03:22:32,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 05:22:51] 2024-06-22 03:22:32,400 | INFO     | did not find any defunct processes belonging to 504285
[2024-06-22 05:22:51] 2024-06-22 03:22:32,415 | INFO     | did not find any defunct processes belonging to 504285
[2024-06-22 05:22:51] 2024-06-22 03:22:32,415 | INFO     | ready for new job
[2024-06-22 05:22:51] 2024-06-22 03:22:32,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 05:22:51] 2024-06-22 03:22:32,418 | INFO     | *************************************
[2024-06-22 05:22:51] 2024-06-22 03:22:32,419 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 05:22:51] 2024-06-22 03:22:32,419 | INFO     | *************************************
[2024-06-22 05:22:51] 2024-06-22 03:22:32,419 | INFO     | 
[2024-06-22 05:22:51] 2024-06-22 03:22:32,427 | INFO     | architecture information:
[2024-06-22 05:22:51] 2024-06-22 03:22:32,427 | INFO     | executing command: cat /etc/os-release
[2024-06-22 05:22:51] 2024-06-22 03:22:32,446 | INFO     | cat /etc/os-release:
[2024-06-22 05:22:51] NAME="CentOS Linux"
[2024-06-22 05:22:51] VERSION="7 (Core)"
[2024-06-22 05:22:51] ID="centos"
[2024-06-22 05:22:51] ID_LIKE="rhel fedora"
[2024-06-22 05:22:51] VERSION_ID="7"
[2024-06-22 05:22:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 05:22:51] ANSI_COLOR="0;31"
[2024-06-22 05:22:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 05:22:51] HOME_URL="https://www.centos.org/"
[2024-06-22 05:22:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 05:22:51] 
[2024-06-22 05:22:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 05:22:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 05:22:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 05:22:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 05:22:51] 
[2024-06-22 05:22:51] 2024-06-22 03:22:32,446 | INFO     | *************************************
[2024-06-22 05:22:51] 2024-06-22 03:22:32,951 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | INFO     | sufficient remaining disk space (3134190518272 B)
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | INFO     | aborting loop
[2024-06-22 05:22:51] 2024-06-22 03:22:33,039 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 05:22:51] 2024-06-22 03:22:33,040 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 05:22:51] 2024-06-22 03:22:33,040 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 05:22:51] 2024-06-22 03:22:33,040 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 05:22:51] 2024-06-22 03:22:33,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 05:22:51] 2024-06-22 03:22:33,709 | INFO     | all data control threads have been joined
[2024-06-22 05:22:51] 2024-06-22 03:22:33,831 | INFO     | all job control threads have been joined
[2024-06-22 05:22:51] 2024-06-22 03:22:33,941 | INFO     | all payload control threads have been joined
[2024-06-22 05:22:51] 2024-06-22 03:22:34,044 | INFO     | [job] retrieve thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,044 | INFO     | [job] job monitor thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,143 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,267 | INFO     | [payload] validate_post thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,417 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,448 | INFO     | [payload] failed_post thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,499 | INFO     | [data] copytool_in thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,715 | INFO     | [data] control thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,837 | INFO     | [job] control thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:34,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 05:22:51] 2024-06-22 03:22:34,947 | INFO     | [payload] control thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:35,058 | INFO     | [data] copytool_out thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:35,188 | INFO     | [job] validate thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:35,268 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:35,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 05:22:51] 2024-06-22 03:22:35,849 | INFO     | [job] queue monitor thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:39,490 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:43,361 | INFO     | job.realtimelogging is not enabled
[2024-06-22 05:22:51] 2024-06-22 03:22:44,366 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 05:22:51] 2024-06-22 03:22:45,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47640212034624)>', '<ExcThread(monitor, started 47640477751040)>']
[2024-06-22 05:22:51] 2024-06-22 03:22:46,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 05:22:51] 2024-06-22 03:22:46,107 | INFO     | [monitor] control thread has ended
[2024-06-22 05:22:51] 2024-06-22 03:22:50,573 | INFO     | all workflow threads have been joined
[2024-06-22 05:22:51] 2024-06-22 03:22:50,574 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 05:22:51] 2024-06-22 03:22:50,574 | INFO     | traces error code: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:50,574 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 05:22:51] 2024-06-22 03:22:50,688 [wrapper] ==== pilot stdout END ====
[2024-06-22 05:22:51] 2024-06-22 03:22:50,690 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 05:22:51] 2024-06-22 03:22:50,692 [wrapper] pilotpid: 484785
[2024-06-22 05:22:51] 2024-06-22 03:22:50,693 [wrapper] Pilot exit status: 0
[2024-06-22 05:22:51] 2024-06-22 03:22:50,719 [wrapper] pandaids: 6238882775
[2024-06-22 05:22:51] 2024-06-22 03:22:50,819 [wrapper] cleanup supervisor_pilot 2544380 484786
[2024-06-22 05:22:51] 2024-06-22 03:22:50,822 [wrapper] Test setup, not cleaning
[2024-06-22 05:22:51] 2024-06-22 03:22:50,825 [wrapper] ==== wrapper stdout END ====
[2024-06-22 05:22:51] 2024-06-22 03:22:50,827 [wrapper] ==== wrapper stderr END ====
[2024-06-22 05:22:51] 2024-06-22 03:22:50,831 [wrapper] apfmon messages muted
[2024-06-22 05:22:51]  *** Error codes and diagnostics ***
[2024-06-22 05:22:51]     "exeErrorCode": 0,
[2024-06-22 05:22:51]     "exeErrorDiag": "",
[2024-06-22 05:22:51]     "pilotErrorCode": 0,
[2024-06-22 05:22:51]     "pilotErrorDiag": "",
[2024-06-22 05:22:51]  *** Listing of results directory ***
[2024-06-22 05:22:51] total 968140
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-22 05:22:51] -rwx------ 1 boinc boinc     32308 Jun 20 17:09 runpilot2-wrapper.sh
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:09 queuedata.json
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc       100 Jun 21 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 05:22:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 21:38 run_atlas
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc       105 Jun 21 21:38 job.xml
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc      6644 Jun 21 21:38 init_data.xml
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc 632111031 Jun 21 21:38 EVNT.38776180._000723.pool.root.1
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:38 start_atlas.sh
[2024-06-22 05:22:51] drwxrwx--x 2 boinc boinc      4096 Jun 21 21:38 shared
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc    482522 Jun 21 21:38 input.tar.gz
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc         0 Jun 21 21:38 boinc_lockfile
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc      2614 Jun 21 21:38 pandaJob.out
[2024-06-22 05:22:51] -rw------- 1 boinc boinc       424 Jun 21 21:38 setup.sh.local
[2024-06-22 05:22:51] -rw------- 1 boinc boinc   1025648 Jun 21 21:38 agis_schedconf.cvmfs.json
[2024-06-22 05:22:51] -rw------- 1 boinc boinc   1321363 Jun 21 21:38 cric_ddmendpoints.json
[2024-06-22 05:22:51] drwx------ 4 boinc boinc      4096 Jun 21 21:38 pilot3
[2024-06-22 05:22:51] -rw------- 1 boinc boinc 348454125 Jun 22 05:21 HITS.38920995._057078.pool.root.1
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc       533 Jun 22 05:21 boinc_task_state.xml
[2024-06-22 05:22:51] -rw------- 1 boinc boinc      1039 Jun 22 05:22 memory_monitor_summary.json
[2024-06-22 05:22:51] -rw------- 1 boinc boinc         0 Jun 22 05:22 agis_ddmendpoints.agis.ALL.json
[2024-06-22 05:22:51] -rw------- 1 boinc boinc    487703 Jun 22 05:22 log.38920995._057078.job.log.tgz.1
[2024-06-22 05:22:51] -rw------- 1 boinc boinc        95 Jun 22 05:22 pilot_heartbeat.json
[2024-06-22 05:22:51] -rw------- 1 boinc boinc      7722 Jun 22 05:22 heartbeat.json
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc      8192 Jun 22 05:22 boinc_mmap_file
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc        29 Jun 22 05:22 wrapper_checkpoint.txt
[2024-06-22 05:22:51] -rw------- 1 boinc boinc      4418 Jun 22 05:22 pilotlog.txt
[2024-06-22 05:22:51] -rw------- 1 boinc boinc   3149506 Jun 22 05:22 log.38920995._057078.job.log.1
[2024-06-22 05:22:51] -rw------- 1 boinc boinc       357 Jun 22 05:22 output.list
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc       620 Jun 22 05:22 runtime_log
[2024-06-22 05:22:51] -rw------- 1 boinc boinc   3655680 Jun 22 05:22 result.tar.gz
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc     11429 Jun 22 05:22 runtime_log.err
[2024-06-22 05:22:51] -rw------- 1 boinc boinc       660 Jun 22 05:22 4eUNDmraYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmyMXKDmQczmGn.diag
[2024-06-22 05:22:51] -rw-r--r-- 1 boinc boinc     21322 Jun 22 05:22 stderr.txt
[2024-06-22 05:22:51] HITS file was successfully produced:
[2024-06-22 05:22:51] -rw------- 1 boinc boinc 348454125 Jun 22 05:21 shared/HITS.pool.root.1
[2024-06-22 05:22:51]  *** Contents of shared directory: ***
[2024-06-22 05:22:51] total 961656
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc 632111031 Jun 21 21:38 ATLAS.root_0
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:38 start_atlas.sh
[2024-06-22 05:22:51] -rw-r--r-- 2 boinc boinc    482522 Jun 21 21:38 input.tar.gz
[2024-06-22 05:22:51] -rw------- 1 boinc boinc 348454125 Jun 22 05:21 HITS.pool.root.1
[2024-06-22 05:22:51] -rw------- 1 boinc boinc   3655680 Jun 22 05:22 result.tar.gz
05:22:53 (476014): run_atlas exited; CPU time 106593.529345
05:22:53 (476014): called boinc_finish(0)

</stderr_txt>
]]>

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