Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:32:38 (3104178): wrapper (7.7.26015): starting
01:32:38 (3104178): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 01:32:38] Arguments: --nthreads 4
[2024-06-21 01:32:38] Threads: 4
[2024-06-21 01:32:38] Checking for CVMFS
[2024-06-21 01:32:38] No cvmfs_config command found, will try listing directly
[2024-06-21 01:32:38] CVMFS is ok
[2024-06-21 01:32:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 01:32:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 01:32:38] Further information can be found at the LHC@home message board.
[2024-06-21 01:32:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 01:32:38] Checking for apptainer binary...
[2024-06-21 01:32:38] which: no apptainer in ((null))
[2024-06-21 01:32:38] apptainer is not installed, using version from CVMFS
[2024-06-21 01:32:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 01:32:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-21 01:32:38] apptainer works
[2024-06-21 01:32:38] Set ATHENA_PROC_NUMBER=4
[2024-06-21 01:32:38] Set ATHENA_CORE_NUMBER=4
[2024-06-21 01:32:38] Starting ATLAS job with PandaID=6238888798
[2024-06-21 01:32:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 05:30:05]  *** The last 200 lines of the pilot log: ***
[2024-06-21 05:30:05] 2024-06-21 03:29:43,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 05:30:05] 2024-06-21 03:29:43,201 | INFO     | fitting pss+swap vs Time
[2024-06-21 05:30:05] 2024-06-21 03:29:43,202 | INFO     | model: linear, x: [1718926397.0, 1718926458.0, 1718926519.0, 1718926580.0, 1718926641.0, 1718926702.0, 1718926763.0, 1718926824.0, 1718926885.0, 1718926946.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,202 | INFO     | sum of square deviations: 3922276332.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,203 | INFO     | sum of deviations: 95940472491.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,203 | INFO     | mean x: 1718933473.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,204 | INFO     | mean y: 2292433.566523605
[2024-06-21 05:30:05] 2024-06-21 03:29:43,204 | INFO     | -- intersect: -42043518626.3911
[2024-06-21 05:30:05] 2024-06-21 03:29:43,204 | INFO     | intersect: -42043518626.3911
[2024-06-21 05:30:05] 2024-06-21 03:29:43,204 | INFO     | chi2: 5.093492705655505
[2024-06-21 05:30:05] 2024-06-21 03:29:43,204 | INFO     | model: linear, x: [1718926397.0, 1718926458.0, 1718926519.0, 1718926580.0, 1718926641.0, 1718926702.0, 1718926763.0, 1718926824.0, 1718926885.0, 1718926946.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,205 | INFO     | sum of square deviations: 3675146117.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,206 | INFO     | sum of deviations: 108505545321.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,206 | INFO     | mean x: 1718933320.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,206 | INFO     | mean y: 2300026.0219298247
[2024-06-21 05:30:05] 2024-06-21 03:29:43,206 | INFO     | -- intersect: -50747735856.74165
[2024-06-21 05:30:05] 2024-06-21 03:29:43,206 | INFO     | intersect: -50747735856.74165
[2024-06-21 05:30:05] 2024-06-21 03:29:43,207 | INFO     | chi2: 4.298441918740499
[2024-06-21 05:30:05] 2024-06-21 03:29:43,207 | INFO     | current chi2=4.298441918740499 (change=15.609147452635591 %)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,207 | INFO     | right removable region: 227
[2024-06-21 05:30:05] 2024-06-21 03:29:43,207 | INFO     | model: linear, x: [1718926702.0, 1718926763.0, 1718926824.0, 1718926885.0, 1718926946.0, 1718927007.0, 1718927068.0, 1718927129.0, 1718927190.0, 1718927251.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,207 | INFO     | sum of square deviations: 3675146117.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,209 | INFO     | sum of deviations: 40334808265.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,209 | INFO     | mean x: 1718933625.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,209 | INFO     | mean y: 2326669.745614035
[2024-06-21 05:30:05] 2024-06-21 03:29:43,209 | INFO     | -- intersect: -18863007114.96927
[2024-06-21 05:30:05] 2024-06-21 03:29:43,209 | INFO     | intersect: -18863007114.96927
[2024-06-21 05:30:05] 2024-06-21 03:29:43,210 | INFO     | chi2: 2.494673297048227
[2024-06-21 05:30:05] 2024-06-21 03:29:43,210 | INFO     | current chi2=2.494673297048227 (change=51.022344760044646 %)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,210 | INFO     | model: linear, x: [1718927007.0, 1718927068.0, 1718927129.0, 1718927190.0, 1718927251.0, 1718927312.0, 1718927373.0, 1718927434.0, 1718927495.0, 1718927556.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,210 | INFO     | sum of square deviations: 3438620752.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | sum of deviations: -5214253404.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | mean x: 1718933778.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | mean y: 2356040.0448430493
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | -- intersect: 2608911676.6249948
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | intersect: 2608911676.6249948
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | chi2: 0.8920190547052262
[2024-06-21 05:30:05] 2024-06-21 03:29:43,212 | INFO     | current chi2=0.8920190547052262 (change=64.24305115380479 %)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,213 | INFO     | model: linear, x: [1718927312.0, 1718927373.0, 1718927434.0, 1718927495.0, 1718927556.0, 1718927617.0, 1718927678.0, 1718927739.0, 1718927800.0, 1718927861.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,213 | INFO     | sum of square deviations: 3212467674.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,214 | INFO     | sum of deviations: -11097320537.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,214 | INFO     | mean x: 1718933930.5
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | mean y: 2359961.1880733944
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | -- intersect: 5940337473.292451
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | intersect: 5940337473.292451
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | chi2: 0.8362919296807149
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | current chi2=0.8362919296807149 (change=6.247302087389466 %)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | left removable region: 30
[2024-06-21 05:30:05] 2024-06-21 03:29:43,215 | INFO     | model: linear, x: [1718928227.0, 1718928288.0, 1718928349.0, 1718928410.0, 1718928471.0, 1718928532.0, 1718928593.0, 1718928654.0, 1718928715.0, 1718928776.0, 1718
[2024-06-21 05:30:05] 2024-06-21 03:29:43,216 | INFO     | sum of square deviations: 2370641658.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,217 | INFO     | sum of deviations: 1328924467.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,217 | INFO     | mean x: 1718934205.0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,217 | INFO     | mean y: 2370808.5583756347
[2024-06-21 05:30:05] 2024-06-21 03:29:43,217 | INFO     | -- intersect: -961222197.7818909
[2024-06-21 05:30:05] 2024-06-21 03:29:43,217 | INFO     | intersect: -961222197.7818909
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | chi2: 0.0002971472076262642
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | -- intersect: -961222197.7818909
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | current memory leak: 0.56 B/s (using 197 data points, chi2=0.00)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | ..............................
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | . Timing measurements:
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | . get job = 0 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,218 | INFO     | . initial setup = 1 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | . payload setup = 6 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | . stage-in = 0 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | . payload execution = 14174 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | . stage-out = 0 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | . log creation = 0 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,219 | INFO     | ..............................
[2024-06-21 05:30:05] 2024-06-21 03:29:43,584 | INFO     | 
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | job summary report
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | --------------------------------------------------
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | PanDA job id: 6238888798
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | task id: 40024058
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | errors: (none)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | pilot state: finished 
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | transexitcode: 0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | exeerrorcode: 0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | exeerrordiag: 
[2024-06-21 05:30:05] 2024-06-21 03:29:43,585 | INFO     | exitcode: 0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | exitmsg: OK
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | cpuconsumptiontime: 53446 s
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | nevents: 400
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | neventsw: 0
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | pid: 3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | pgrp: 3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | corecount: 4
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | event service: False
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | sizes: {0: 2386930, 5: 2387136, 11: 2387192, 14184: 2417712, 14185: 2426696, 14188: 2426752, 14197: 2427050}
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | --------------------------------------------------
[2024-06-21 05:30:05] 2024-06-21 03:29:43,586 | INFO     | 
[2024-06-21 05:30:05] 2024-06-21 03:29:43,587 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/1
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | job 6238888798 has completed (purged errors)
[2024-06-21 05:30:05] 2024-06-21 03:29:43,608 | INFO     | overall cleanup function is called
[2024-06-21 05:30:05] 2024-06-21 03:29:44,503 | INFO     | 14216s have passed since pilot start
[2024-06-21 05:30:05] 2024-06-21 03:29:44,616 | INFO     | --- collectZombieJob: --- 10, [3134354]
[2024-06-21 05:30:05] 2024-06-21 03:29:44,617 | INFO     | zombie collector waiting for pid 3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:44,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 05:30:05] 2024-06-21 03:29:45,621 | INFO     | collected zombie processes
[2024-06-21 05:30:05] 2024-06-21 03:29:45,622 | INFO     | will now attempt to kill all subprocesses of pid=3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:45,870 | INFO     | process IDs to be killed: [3134354] (in reverse order)
[2024-06-21 05:30:05] 2024-06-21 03:29:46,070 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 05:30:05] 2024-06-21 03:29:46,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 05:30:05] 2024-06-21 03:29:46,090 | INFO     | did not find any defunct processes belonging to 3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:46,104 | INFO     | did not find any defunct processes belonging to 3134354
[2024-06-21 05:30:05] 2024-06-21 03:29:46,104 | INFO     | ready for new job
[2024-06-21 05:30:05] 2024-06-21 03:29:46,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 05:30:05] 2024-06-21 03:29:46,106 | INFO     | *************************************
[2024-06-21 05:30:05] 2024-06-21 03:29:46,106 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 05:30:05] 2024-06-21 03:29:46,107 | INFO     | *************************************
[2024-06-21 05:30:05] 2024-06-21 03:29:46,107 | INFO     | 
[2024-06-21 05:30:05] 2024-06-21 03:29:46,113 | INFO     | architecture information:
[2024-06-21 05:30:05] 2024-06-21 03:29:46,114 | INFO     | executing command: cat /etc/os-release
[2024-06-21 05:30:05] 2024-06-21 03:29:46,129 | INFO     | cat /etc/os-release:
[2024-06-21 05:30:05] NAME="CentOS Linux"
[2024-06-21 05:30:05] VERSION="7 (Core)"
[2024-06-21 05:30:05] ID="centos"
[2024-06-21 05:30:05] ID_LIKE="rhel fedora"
[2024-06-21 05:30:05] VERSION_ID="7"
[2024-06-21 05:30:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 05:30:05] ANSI_COLOR="0;31"
[2024-06-21 05:30:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 05:30:05] HOME_URL="https://www.centos.org/"
[2024-06-21 05:30:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 05:30:05] 
[2024-06-21 05:30:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 05:30:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 05:30:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 05:30:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 05:30:05] 
[2024-06-21 05:30:05] 2024-06-21 03:29:46,129 | INFO     | *************************************
[2024-06-21 05:30:05] 2024-06-21 03:29:46,631 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/1
[2024-06-21 05:30:05] 2024-06-21 03:29:46,646 | INFO     | sufficient remaining disk space (3168776749056 B)
[2024-06-21 05:30:05] 2024-06-21 03:29:46,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 05:30:05] 2024-06-21 03:29:46,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 05:30:05] 2024-06-21 03:29:46,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 05:30:05] 2024-06-21 03:29:46,763 | INFO     | all payload control threads have been joined
[2024-06-21 05:30:05] 2024-06-21 03:29:47,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 05:30:05] 2024-06-21 03:29:47,275 | INFO     | aborting loop
[2024-06-21 05:30:05] 2024-06-21 03:29:47,382 | INFO     | all data control threads have been joined
[2024-06-21 05:30:05] 2024-06-21 03:29:47,512 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 05:30:05] 2024-06-21 03:29:47,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 05:30:05] 2024-06-21 03:29:47,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 05:30:05] 2024-06-21 03:29:47,651 | INFO     | [job] retrieve thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:47,768 | INFO     | [payload] control thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,245 | INFO     | all job control threads have been joined
[2024-06-21 05:30:05] 2024-06-21 03:29:48,279 | INFO     | [job] job monitor thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 05:30:05] 2024-06-21 03:29:48,387 | INFO     | [data] control thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,505 | INFO     | [payload] validate_post thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,545 | INFO     | [data] copytool_in thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,629 | INFO     | [job] validate thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,652 | INFO     | [data] copytool_out thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,764 | INFO     | [payload] failed_post thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:48,820 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:49,071 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:49,079 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:49,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 05:30:05] 2024-06-21 03:29:49,250 | INFO     | [job] control thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:49,328 | INFO     | [job] queue monitor thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:53,148 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:57,401 | INFO     | job.realtimelogging is not enabled
[2024-06-21 05:30:05] 2024-06-21 03:29:58,406 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 05:30:05] 2024-06-21 03:29:59,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47320287958080)>', '<ExcThread(monitor, started 47320468231936)>']
[2024-06-21 05:30:05] 2024-06-21 03:29:59,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 05:30:05] 2024-06-21 03:29:59,575 | INFO     | [monitor] control thread has ended
[2024-06-21 05:30:05] 2024-06-21 03:30:04,274 | INFO     | all workflow threads have been joined
[2024-06-21 05:30:05] 2024-06-21 03:30:04,274 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 05:30:05] 2024-06-21 03:30:04,275 | INFO     | traces error code: 0
[2024-06-21 05:30:05] 2024-06-21 03:30:04,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 05:30:05] 2024-06-21 03:30:04,423 [wrapper] ==== pilot stdout END ====
[2024-06-21 05:30:05] 2024-06-21 03:30:04,426 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 05:30:05] 2024-06-21 03:30:04,428 [wrapper] pilotpid: 3113708
[2024-06-21 05:30:05] 2024-06-21 03:30:04,430 [wrapper] Pilot exit status: 0
[2024-06-21 05:30:05] 2024-06-21 03:30:04,441 [wrapper] pandaids: 6238888798
[2024-06-21 05:30:05] 2024-06-21 03:30:04,604 [wrapper] cleanup supervisor_pilot 4097116 3113709
[2024-06-21 05:30:05] 2024-06-21 03:30:04,606 [wrapper] Test setup, not cleaning
[2024-06-21 05:30:05] 2024-06-21 03:30:04,609 [wrapper] ==== wrapper stdout END ====
[2024-06-21 05:30:05] 2024-06-21 03:30:04,611 [wrapper] ==== wrapper stderr END ====
[2024-06-21 05:30:05] 2024-06-21 03:30:04,615 [wrapper] apfmon messages muted
[2024-06-21 05:30:05]  *** Error codes and diagnostics ***
[2024-06-21 05:30:05]     "exeErrorCode": 0,
[2024-06-21 05:30:05]     "exeErrorDiag": "",
[2024-06-21 05:30:05]     "pilotErrorCode": 0,
[2024-06-21 05:30:05]     "pilotErrorDiag": "",
[2024-06-21 05:30:05]  *** Listing of results directory ***
[2024-06-21 05:30:05] total 872220
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 05:30:05] -rwx------ 1 boinc boinc     32308 Jun 20 17:09 runpilot2-wrapper.sh
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:09 queuedata.json
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc       100 Jun 21 01:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 05:30:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 01:32 run_atlas
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc       105 Jun 21 01:32 job.xml
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc    482497 Jun 21 01:32 input.tar.gz
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc      6644 Jun 21 01:32 init_data.xml
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc 611886955 Jun 21 01:32 EVNT.40024055._000006.pool.root.1
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:32 start_atlas.sh
[2024-06-21 05:30:05] drwxrwx--x 2 boinc boinc      4096 Jun 21 01:32 shared
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc         0 Jun 21 01:32 boinc_lockfile
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc      2552 Jun 21 01:32 pandaJob.out
[2024-06-21 05:30:05] -rw------- 1 boinc boinc       424 Jun 21 01:32 setup.sh.local
[2024-06-21 05:30:05] -rw------- 1 boinc boinc   1024126 Jun 21 01:32 agis_schedconf.cvmfs.json
[2024-06-21 05:30:05] -rw------- 1 boinc boinc   1321251 Jun 21 01:32 cric_ddmendpoints.json
[2024-06-21 05:30:05] drwx------ 4 boinc boinc      4096 Jun 21 01:32 pilot3
[2024-06-21 05:30:05] -rw------- 1 boinc boinc 274200041 Jun 21 05:28 HITS.40024058._000141.pool.root.1
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc       532 Jun 21 05:29 boinc_task_state.xml
[2024-06-21 05:30:05] -rw------- 1 boinc boinc      1035 Jun 21 05:29 memory_monitor_summary.json
[2024-06-21 05:30:05] -rw------- 1 boinc boinc         0 Jun 21 05:29 agis_ddmendpoints.agis.ALL.json
[2024-06-21 05:30:05] -rw------- 1 boinc boinc    343771 Jun 21 05:29 log.40024058._000141.job.log.tgz.1
[2024-06-21 05:30:05] -rw------- 1 boinc boinc        95 Jun 21 05:29 pilot_heartbeat.json
[2024-06-21 05:30:05] -rw------- 1 boinc boinc      7704 Jun 21 05:29 heartbeat.json
[2024-06-21 05:30:05] -rw------- 1 boinc boinc      4295 Jun 21 05:30 pilotlog.txt
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc      8192 Jun 21 05:30 boinc_mmap_file
[2024-06-21 05:30:05] -rw------- 1 boinc boinc   1422349 Jun 21 05:30 log.40024058._000141.job.log.1
[2024-06-21 05:30:05] -rw------- 1 boinc boinc       357 Jun 21 05:30 output.list
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc       620 Jun 21 05:30 runtime_log
[2024-06-21 05:30:05] -rw------- 1 boinc boinc   1781760 Jun 21 05:30 result.tar.gz
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc     11429 Jun 21 05:30 runtime_log.err
[2024-06-21 05:30:05] -rw------- 1 boinc boinc       657 Jun 21 05:30 GynMDmoaYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmVLlKDmpFNLum.diag
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc        28 Jun 21 05:30 wrapper_checkpoint.txt
[2024-06-21 05:30:05] -rw-r--r-- 1 boinc boinc     21248 Jun 21 05:30 stderr.txt
[2024-06-21 05:30:05] HITS file was successfully produced:
[2024-06-21 05:30:05] -rw------- 1 boinc boinc 274200041 Jun 21 05:28 shared/HITS.pool.root.1
[2024-06-21 05:30:05]  *** Contents of shared directory: ***
[2024-06-21 05:30:05] total 867564
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc    482497 Jun 21 01:32 input.tar.gz
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc 611886955 Jun 21 01:32 ATLAS.root_0
[2024-06-21 05:30:05] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:32 start_atlas.sh
[2024-06-21 05:30:05] -rw------- 1 boinc boinc 274200041 Jun 21 05:28 HITS.pool.root.1
[2024-06-21 05:30:05] -rw------- 1 boinc boinc   1781760 Jun 21 05:30 result.tar.gz
05:30:07 (3104178): run_atlas exited; CPU time 53137.670419
05:30:07 (3104178): called boinc_finish(0)

</stderr_txt>
]]>

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