Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:21 (3572582): wrapper (7.7.26015): starting
02:53:21 (3572582): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 02:53:21] Arguments: --nthreads 4
[2024-06-21 02:53:21] Threads: 4
[2024-06-21 02:53:21] Checking for CVMFS
[2024-06-21 02:53:21] No cvmfs_config command found, will try listing directly
[2024-06-21 02:53:21] CVMFS is ok
[2024-06-21 02:53:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 02:53:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 02:53:21] Further information can be found at the LHC@home message board.
[2024-06-21 02:53:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 02:53:21] Checking for apptainer binary...
[2024-06-21 02:53:21] which: no apptainer in ((null))
[2024-06-21 02:53:21] apptainer is not installed, using version from CVMFS
[2024-06-21 02:53:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 02:53:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-21 02:53:22] apptainer works
[2024-06-21 02:53:22] Set ATHENA_PROC_NUMBER=4
[2024-06-21 02:53:22] Set ATHENA_CORE_NUMBER=4
[2024-06-21 02:53:22] Starting ATLAS job with PandaID=6238888792
[2024-06-21 02:53:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 13:31:05]  *** The last 200 lines of the pilot log: ***
[2024-06-21 13:31:05] 2024-06-21 11:30:49,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 13:31:05] 2024-06-21 11:30:49,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 13:31:05] 2024-06-21 11:30:49,542 | INFO     | fitting pss+swap vs Time
[2024-06-21 13:31:05] 2024-06-21 11:30:49,543 | INFO     | model: linear, x: [1718931300.0, 1718931361.0, 1718931422.0, 1718931483.0, 1718931544.0, 1718931605.0, 1718931666.0, 1718931727.0, 1718931788.0, 1718931849.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,543 | INFO     | sum of square deviations: 76067705312.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,553 | INFO     | sum of deviations: 370510721951.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,553 | INFO     | mean x: 1718950362.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,553 | INFO     | mean y: 2345523.7492012777
[2024-06-21 13:31:05] 2024-06-21 11:30:49,553 | INFO     | -- intersect: -8370321131.465509
[2024-06-21 13:31:05] 2024-06-21 11:30:49,553 | INFO     | intersect: -8370321131.465509
[2024-06-21 13:31:05] 2024-06-21 11:30:49,554 | INFO     | chi2: 4.974620308889312
[2024-06-21 13:31:05] 2024-06-21 11:30:49,554 | INFO     | model: linear, x: [1718931300.0, 1718931361.0, 1718931422.0, 1718931483.0, 1718931544.0, 1718931605.0, 1718931666.0, 1718931727.0, 1718931788.0, 1718931849.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,555 | INFO     | sum of square deviations: 74259513270.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,564 | INFO     | sum of deviations: 407905685999.00006
[2024-06-21 13:31:05] 2024-06-21 11:30:49,564 | INFO     | mean x: 1718950210.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,564 | INFO     | mean y: 2348655.230273752
[2024-06-21 13:31:05] 2024-06-21 11:30:49,564 | INFO     | -- intersect: -9439802710.06072
[2024-06-21 13:31:05] 2024-06-21 11:30:49,564 | INFO     | intersect: -9439802710.06072
[2024-06-21 13:31:05] 2024-06-21 11:30:49,565 | INFO     | chi2: 4.157227968781931
[2024-06-21 13:31:05] 2024-06-21 11:30:49,565 | INFO     | current chi2=4.157227968781931 (change=16.431250816203118 %)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,565 | INFO     | right removable region: 620
[2024-06-21 13:31:05] 2024-06-21 11:30:49,566 | INFO     | model: linear, x: [1718931605.0, 1718931666.0, 1718931727.0, 1718931788.0, 1718931849.0, 1718931910.0, 1718931971.0, 1718932032.0, 1718932093.0, 1718932154.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,566 | INFO     | sum of square deviations: 74259513270.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,575 | INFO     | sum of deviations: 215437074886.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,575 | INFO     | mean x: 1718950515.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,575 | INFO     | mean y: 2358589.7842190014
[2024-06-21 13:31:05] 2024-06-21 11:30:49,575 | INFO     | -- intersect: -4984553585.076354
[2024-06-21 13:31:05] 2024-06-21 11:30:49,575 | INFO     | intersect: -4984553585.076354
[2024-06-21 13:31:05] 2024-06-21 11:30:49,576 | INFO     | chi2: 2.402262104285101
[2024-06-21 13:31:05] 2024-06-21 11:30:49,576 | INFO     | current chi2=2.402262104285101 (change=51.70963902526551 %)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,577 | INFO     | model: linear, x: [1718931910.0, 1718931971.0, 1718932032.0, 1718932093.0, 1718932154.0, 1718932215.0, 1718932276.0, 1718932337.0, 1718932398.0, 1718932459.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,577 | INFO     | sum of square deviations: 72480205490.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,586 | INFO     | sum of deviations: 93048790701.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,586 | INFO     | mean x: 1718950667.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,586 | INFO     | mean y: 2369079.2678571427
[2024-06-21 13:31:05] 2024-06-21 11:30:49,586 | INFO     | -- intersect: -2204389025.3084164
[2024-06-21 13:31:05] 2024-06-21 11:30:49,586 | INFO     | intersect: -2204389025.3084164
[2024-06-21 13:31:05] 2024-06-21 11:30:49,587 | INFO     | chi2: 0.9253928296193824
[2024-06-21 13:31:05] 2024-06-21 11:30:49,587 | INFO     | current chi2=0.9253928296193824 (change=61.47827383328873 %)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,588 | INFO     | model: linear, x: [1718932215.0, 1718932276.0, 1718932337.0, 1718932398.0, 1718932459.0, 1718932520.0, 1718932581.0, 1718932642.0, 1718932703.0, 1718932764.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,588 | INFO     | sum of square deviations: 70729549410.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,597 | INFO     | sum of deviations: 67303432010.99999
[2024-06-21 13:31:05] 2024-06-21 11:30:49,597 | INFO     | mean x: 1718950820.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,597 | INFO     | mean y: 2371316.8265139116
[2024-06-21 13:31:05] 2024-06-21 11:30:49,597 | INFO     | -- intersect: -1633314059.5003119
[2024-06-21 13:31:05] 2024-06-21 11:30:49,597 | INFO     | intersect: -1633314059.5003119
[2024-06-21 13:31:05] 2024-06-21 11:30:49,598 | INFO     | chi2: 0.8439751105856658
[2024-06-21 13:31:05] 2024-06-21 11:30:49,598 | INFO     | current chi2=0.8439751105856658 (change=8.798179154597952 %)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,598 | INFO     | left removable region: 30
[2024-06-21 13:31:05] 2024-06-21 11:30:49,598 | INFO     | model: linear, x: [1718933130.0, 1718933191.0, 1718933252.0, 1718933313.0, 1718933374.0, 1718933435.0, 1718933496.0, 1718933557.0, 1718933618.0, 1718933679.0, 1718
[2024-06-21 13:31:05] 2024-06-21 11:30:49,599 | INFO     | sum of square deviations: 63684421967.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,607 | INFO     | sum of deviations: 88235471723.0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,607 | INFO     | mean x: 1718951094.5
[2024-06-21 13:31:05] 2024-06-21 11:30:49,607 | INFO     | mean y: 2376332.620338983
[2024-06-21 13:31:05] 2024-06-21 11:30:49,607 | INFO     | -- intersect: -2379249440.310088
[2024-06-21 13:31:05] 2024-06-21 11:30:49,608 | INFO     | intersect: -2379249440.310088
[2024-06-21 13:31:05] 2024-06-21 11:30:49,608 | INFO     | chi2: 0.004775337886861081
[2024-06-21 13:31:05] 2024-06-21 11:30:49,608 | INFO     | -- intersect: -2379249440.310088
[2024-06-21 13:31:05] 2024-06-21 11:30:49,608 | INFO     | current memory leak: 1.39 B/s (using 590 data points, chi2=0.00)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | ..............................
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . Timing measurements:
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . get job = 0 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . initial setup = 1 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . payload setup = 19 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . stage-in = 0 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . payload execution = 38140 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . stage-out = 1 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | . log creation = 0 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,610 | INFO     | ..............................
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | 
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | job summary report
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | --------------------------------------------------
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | PanDA job id: 6238888792
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | task id: 38921013
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | errors: (none)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,716 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | pilot state: finished 
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | transexitcode: 0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | exeerrorcode: 0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | exeerrordiag: 
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | exitcode: 0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | exitmsg: OK
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | cpuconsumptiontime: 148034 s
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | nevents: 400
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | neventsw: 0
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | pid: 3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | pgrp: 3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | corecount: 4
[2024-06-21 13:31:05] 2024-06-21 11:30:49,717 | INFO     | event service: False
[2024-06-21 13:31:05] 2024-06-21 11:30:49,718 | INFO     | sizes: {0: 2386902, 1: 2387101, 12: 2387101, 14: 2387335, 22: 2387363, 38164: 2428914, 38167: 2437896, 38170: 2437952, 38181: 2438122}
[2024-06-21 13:31:05] 2024-06-21 11:30:49,718 | INFO     | --------------------------------------------------
[2024-06-21 13:31:05] 2024-06-21 11:30:49,718 | INFO     | 
[2024-06-21 13:31:05] 2024-06-21 11:30:49,718 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-21 13:31:05] 2024-06-21 11:30:49,744 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,744 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,744 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,744 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | job 6238888792 has completed (purged errors)
[2024-06-21 13:31:05] 2024-06-21 11:30:49,745 | INFO     | overall cleanup function is called
[2024-06-21 13:31:05] 2024-06-21 11:30:50,749 | INFO     | --- collectZombieJob: --- 10, [3589206]
[2024-06-21 13:31:05] 2024-06-21 11:30:50,749 | INFO     | zombie collector waiting for pid 3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:50,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 13:31:05] 2024-06-21 11:30:51,754 | INFO     | collected zombie processes
[2024-06-21 13:31:05] 2024-06-21 11:30:51,755 | INFO     | will now attempt to kill all subprocesses of pid=3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:52,042 | INFO     | process IDs to be killed: [3589206] (in reverse order)
[2024-06-21 13:31:05] 2024-06-21 11:30:52,255 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 13:31:05] 2024-06-21 11:30:52,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 13:31:05] 2024-06-21 11:30:52,275 | INFO     | did not find any defunct processes belonging to 3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:52,287 | INFO     | did not find any defunct processes belonging to 3589206
[2024-06-21 13:31:05] 2024-06-21 11:30:52,287 | INFO     | ready for new job
[2024-06-21 13:31:05] 2024-06-21 11:30:52,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 13:31:05] 2024-06-21 11:30:52,290 | INFO     | *************************************
[2024-06-21 13:31:05] 2024-06-21 11:30:52,291 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 13:31:05] 2024-06-21 11:30:52,291 | INFO     | *************************************
[2024-06-21 13:31:05] 2024-06-21 11:30:52,291 | INFO     | 
[2024-06-21 13:31:05] 2024-06-21 11:30:52,298 | INFO     | architecture information:
[2024-06-21 13:31:05] 2024-06-21 11:30:52,298 | INFO     | executing command: cat /etc/os-release
[2024-06-21 13:31:05] 2024-06-21 11:30:52,320 | INFO     | cat /etc/os-release:
[2024-06-21 13:31:05] NAME="CentOS Linux"
[2024-06-21 13:31:05] VERSION="7 (Core)"
[2024-06-21 13:31:05] ID="centos"
[2024-06-21 13:31:05] ID_LIKE="rhel fedora"
[2024-06-21 13:31:05] VERSION_ID="7"
[2024-06-21 13:31:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 13:31:05] ANSI_COLOR="0;31"
[2024-06-21 13:31:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 13:31:05] HOME_URL="https://www.centos.org/"
[2024-06-21 13:31:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 13:31:05] 
[2024-06-21 13:31:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 13:31:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 13:31:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 13:31:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 13:31:05] 
[2024-06-21 13:31:05] 2024-06-21 11:30:52,320 | INFO     | *************************************
[2024-06-21 13:31:05] 2024-06-21 11:30:52,823 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-21 13:31:05] 2024-06-21 11:30:52,851 | INFO     | sufficient remaining disk space (3174787186688 B)
[2024-06-21 13:31:05] 2024-06-21 11:30:52,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 13:31:05] 2024-06-21 11:30:52,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 13:31:05] 2024-06-21 11:30:52,852 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 13:31:05] 2024-06-21 11:30:52,853 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 13:31:05] 2024-06-21 11:30:52,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 13:31:05] 2024-06-21 11:30:52,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 13:31:05] 2024-06-21 11:30:52,873 | INFO     | all payload control threads have been joined
[2024-06-21 13:31:05] 2024-06-21 11:30:52,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 13:31:05] 2024-06-21 11:30:52,966 | INFO     | aborting loop
[2024-06-21 13:31:05] 2024-06-21 11:30:53,493 | INFO     | all data control threads have been joined
[2024-06-21 13:31:05] 2024-06-21 11:30:53,857 | INFO     | [job] retrieve thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:53,878 | INFO     | [payload] control thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:53,970 | INFO     | [job] job monitor thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:54,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 13:31:05] 2024-06-21 11:30:54,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 13:31:05] 2024-06-21 11:30:54,196 | INFO     | all job control threads have been joined
[2024-06-21 13:31:05] 2024-06-21 11:30:54,498 | INFO     | [data] control thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:54,615 | INFO     | [data] copytool_in thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:54,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 13:31:05] 2024-06-21 11:30:54,896 | INFO     | [job] validate thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:54,969 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,059 | INFO     | [payload] failed_post thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,201 | INFO     | [job] control thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,213 | INFO     | [payload] validate_post thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,226 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,246 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,342 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:55,730 | INFO     | [job] queue monitor thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:56,164 | INFO     | [data] copytool_out thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:58,188 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 13:31:05] 2024-06-21 11:30:59,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47570467546176)>', '<ExcThread(monitor, started 47570649921280)>']
[2024-06-21 13:31:05] 2024-06-21 11:30:59,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 13:31:05] 2024-06-21 11:30:59,888 | INFO     | [monitor] control thread has ended
[2024-06-21 13:31:05] 2024-06-21 11:31:04,431 | INFO     | all workflow threads have been joined
[2024-06-21 13:31:05] 2024-06-21 11:31:04,432 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 13:31:05] 2024-06-21 11:31:04,432 | INFO     | traces error code: 0
[2024-06-21 13:31:05] 2024-06-21 11:31:04,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 13:31:05] 2024-06-21 11:31:04,660 [wrapper] ==== pilot stdout END ====
[2024-06-21 13:31:05] 2024-06-21 11:31:04,663 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 13:31:05] 2024-06-21 11:31:04,665 [wrapper] pilotpid: 3579031
[2024-06-21 13:31:05] 2024-06-21 11:31:04,667 [wrapper] Pilot exit status: 0
[2024-06-21 13:31:05] 2024-06-21 11:31:04,731 [wrapper] pandaids: 6238888792
[2024-06-21 13:31:05] 2024-06-21 11:31:04,863 [wrapper] cleanup supervisor_pilot 2243118 3579032
[2024-06-21 13:31:05] 2024-06-21 11:31:04,866 [wrapper] Test setup, not cleaning
[2024-06-21 13:31:05] 2024-06-21 11:31:04,869 [wrapper] ==== wrapper stdout END ====
[2024-06-21 13:31:05] 2024-06-21 11:31:04,871 [wrapper] ==== wrapper stderr END ====
[2024-06-21 13:31:05] 2024-06-21 11:31:04,875 [wrapper] apfmon messages muted
[2024-06-21 13:31:05]  *** Error codes and diagnostics ***
[2024-06-21 13:31:05]     "exeErrorCode": 0,
[2024-06-21 13:31:05]     "exeErrorDiag": "",
[2024-06-21 13:31:05]     "pilotErrorCode": 0,
[2024-06-21 13:31:05]     "pilotErrorDiag": "",
[2024-06-21 13:31:05]  *** Listing of results directory ***
[2024-06-21 13:31:05] total 874280
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 13:31:05] -rwx------ 1 boinc boinc     32308 Jun 20 17:09 runpilot2-wrapper.sh
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:09 queuedata.json
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc       100 Jun 21 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 13:31:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 02:53 run_atlas
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc       105 Jun 21 02:53 job.xml
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc 538581061 Jun 21 02:53 EVNT.38776210._000516.pool.root.1
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:53 start_atlas.sh
[2024-06-21 13:31:05] drwxrwx--x 2 boinc boinc      4096 Jun 21 02:53 shared
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc    482531 Jun 21 02:53 input.tar.gz
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc      6642 Jun 21 02:53 init_data.xml
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc         0 Jun 21 02:53 boinc_lockfile
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc      2646 Jun 21 02:53 pandaJob.out
[2024-06-21 13:31:05] -rw------- 1 boinc boinc       424 Jun 21 02:53 setup.sh.local
[2024-06-21 13:31:05] -rw------- 1 boinc boinc   1024134 Jun 21 02:53 agis_schedconf.cvmfs.json
[2024-06-21 13:31:05] -rw------- 1 boinc boinc   1321251 Jun 21 02:53 cric_ddmendpoints.json
[2024-06-21 13:31:05] drwx------ 4 boinc boinc      4096 Jun 21 02:53 pilot3
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc       533 Jun 21 13:29 boinc_task_state.xml
[2024-06-21 13:31:05] -rw------- 1 boinc boinc 343169169 Jun 21 13:29 HITS.38921013._050246.pool.root.1
[2024-06-21 13:31:05] -rw------- 1 boinc boinc        95 Jun 21 13:30 pilot_heartbeat.json
[2024-06-21 13:31:05] -rw------- 1 boinc boinc      1038 Jun 21 13:30 memory_monitor_summary.json
[2024-06-21 13:31:05] -rw------- 1 boinc boinc         0 Jun 21 13:30 agis_ddmendpoints.agis.ALL.json
[2024-06-21 13:31:05] -rw------- 1 boinc boinc    590214 Jun 21 13:30 log.38921013._050246.job.log.tgz.1
[2024-06-21 13:31:05] -rw------- 1 boinc boinc      7715 Jun 21 13:30 heartbeat.json
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc      8192 Jun 21 13:31 boinc_mmap_file
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc        29 Jun 21 13:31 wrapper_checkpoint.txt
[2024-06-21 13:31:05] -rw------- 1 boinc boinc      4345 Jun 21 13:31 pilotlog.txt
[2024-06-21 13:31:05] -rw------- 1 boinc boinc   4393268 Jun 21 13:31 log.38921013._050246.job.log.1
[2024-06-21 13:31:05] -rw------- 1 boinc boinc       357 Jun 21 13:31 output.list
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc       620 Jun 21 13:31 runtime_log
[2024-06-21 13:31:05] -rw------- 1 boinc boinc   5007360 Jun 21 13:31 result.tar.gz
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc     11410 Jun 21 13:31 runtime_log.err
[2024-06-21 13:31:05] -rw------- 1 boinc boinc       660 Jun 21 13:31 6OmMDmoaYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmULlKDmJu1cIo.diag
[2024-06-21 13:31:05] -rw-r--r-- 1 boinc boinc     21348 Jun 21 13:31 stderr.txt
[2024-06-21 13:31:05] HITS file was successfully produced:
[2024-06-21 13:31:05] -rw------- 1 boinc boinc 343169169 Jun 21 13:29 shared/HITS.pool.root.1
[2024-06-21 13:31:05]  *** Contents of shared directory: ***
[2024-06-21 13:31:05] total 866480
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc 538581061 Jun 21 02:53 ATLAS.root_0
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:53 start_atlas.sh
[2024-06-21 13:31:05] -rw-r--r-- 2 boinc boinc    482531 Jun 21 02:53 input.tar.gz
[2024-06-21 13:31:05] -rw------- 1 boinc boinc 343169169 Jun 21 13:29 HITS.pool.root.1
[2024-06-21 13:31:05] -rw------- 1 boinc boinc   5007360 Jun 21 13:31 result.tar.gz
13:31:07 (3572582): run_atlas exited; CPU time 147322.455054
13:31:07 (3572582): called boinc_finish(0)

</stderr_txt>
]]>

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