Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:05:33 (1972824): wrapper (7.7.26015): starting
21:05:33 (1972824): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 21:05:33] Arguments: --nthreads 4
[2024-06-20 21:05:33] Threads: 4
[2024-06-20 21:05:33] Checking for CVMFS
[2024-06-20 21:05:33] No cvmfs_config command found, will try listing directly
[2024-06-20 21:05:33] CVMFS is ok
[2024-06-20 21:05:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 21:05:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 21:05:33] Further information can be found at the LHC@home message board.
[2024-06-20 21:05:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 21:05:33] Checking for apptainer binary...
[2024-06-20 21:05:33] which: no apptainer in ((null))
[2024-06-20 21:05:33] apptainer is not installed, using version from CVMFS
[2024-06-20 21:05:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 21:05:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-20 21:05:34] apptainer works
[2024-06-20 21:05:34] Set ATHENA_PROC_NUMBER=4
[2024-06-20 21:05:34] Set ATHENA_CORE_NUMBER=4
[2024-06-20 21:05:34] Starting ATLAS job with PandaID=6238875933
[2024-06-20 21:05:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 00:52:40]  *** The last 200 lines of the pilot log: ***
[2024-06-21 00:52:40] 2024-06-20 22:52:26,580 | INFO     | current chi2=0.09905687615129698 (change=96.1081774971224 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,580 | INFO     | model: linear, x: [1718911002.0, 1718911063.0, 1718911124.0, 1718911185.0, 1718911246.0, 1718911307.0, 1718911368.0, 1718911429.0, 1718911490.0, 1718911551.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,580 | INFO     | monitor loop #1019: job 0:6238875933 is in state 'finished'
[2024-06-21 00:52:40] 2024-06-20 22:52:26,581 | INFO     | sum of square deviations: 2954447953.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,582 | INFO     | sum of deviations: 8177773703.999999
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | mean x: 1718917437.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | mean y: 2367664.783018868
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | -- intersect: -4755515379.1409445
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | intersect: -4755515379.1409445
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | chi2: 0.0019375303528187432
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | current chi2=0.0019375303528187432 (change=98.04402235554107 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,583 | INFO     | model: linear, x: [1718911307.0, 1718911368.0, 1718911429.0, 1718911490.0, 1718911551.0, 1718911612.0, 1718911673.0, 1718911734.0, 1718911795.0, 1718911856.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,584 | INFO     | sum of square deviations: 2750295288.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,585 | INFO     | sum of deviations: 6537348772.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,585 | INFO     | mean x: 1718917590.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,585 | INFO     | mean y: 2368887.3913043477
[2024-06-21 00:52:40] 2024-06-20 22:52:26,585 | INFO     | -- intersect: -4083433769.939831
[2024-06-21 00:52:40] 2024-06-20 22:52:26,585 | INFO     | intersect: -4083433769.939831
[2024-06-21 00:52:40] 2024-06-20 22:52:26,586 | INFO     | chi2: 0.0007592514195279776
[2024-06-21 00:52:40] 2024-06-20 22:52:26,586 | INFO     | current chi2=0.0007592514195279776 (change=60.813443855297066 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,586 | INFO     | model: linear, x: [1718911612.0, 1718911673.0, 1718911734.0, 1718911795.0, 1718911856.0, 1718911917.0, 1718911978.0, 1718912039.0, 1718912100.0, 1718912161.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,586 | INFO     | sum of square deviations: 2555770710.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,587 | INFO     | sum of deviations: 5441835833.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,587 | INFO     | mean x: 1718917742.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,587 | INFO     | mean y: 2369744.717821782
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | -- intersect: -3657609660.9251194
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | intersect: -3657609660.9251194
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | chi2: 0.0003337622760551036
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | current chi2=0.0003337622760551036 (change=56.04061217789994 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | model: linear, x: [1718911917.0, 1718911978.0, 1718912039.0, 1718912100.0, 1718912161.0, 1718912222.0, 1718912283.0, 1718912344.0, 1718912405.0, 1718912466.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,588 | INFO     | sum of square deviations: 2370641658.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | sum of deviations: 4665635873.999999
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | mean x: 1718917895.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | mean y: 2370383.010152284
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | -- intersect: -3380614543.58501
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | intersect: -3380614543.58501
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | chi2: 0.0001686928799707631
[2024-06-21 00:52:40] 2024-06-20 22:52:26,590 | INFO     | current chi2=0.0001686928799707631 (change=49.45717593832798 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,591 | INFO     | model: linear, x: [1718912222.0, 1718912283.0, 1718912344.0, 1718912405.0, 1718912466.0, 1718912527.0, 1718912588.0, 1718912649.0, 1718912710.0, 1718912771.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,591 | INFO     | sum of square deviations: 2194675568.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | sum of deviations: 4144854382.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | mean x: 1718918047.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | mean y: 2370833.765625
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | -- intersect: -3243970040.5857487
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | intersect: -3243970040.5857487
[2024-06-21 00:52:40] 2024-06-20 22:52:26,592 | INFO     | chi2: 0.00013209823189423744
[2024-06-21 00:52:40] 2024-06-20 22:52:26,593 | INFO     | current chi2=0.00013209823189423744 (change=21.693060242298337 %)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,593 | INFO     | left removable region: 60
[2024-06-21 00:52:40] 2024-06-20 22:52:26,593 | INFO     | model: linear, x: [1718914052.0, 1718914113.0, 1718914174.0, 1718914235.0, 1718914296.0, 1718914357.0, 1718914418.0, 1718914479.0, 1718914540.0, 1718914601.0, 1718
[2024-06-21 00:52:40] 2024-06-20 22:52:26,593 | INFO     | sum of square deviations: 1177156955.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,594 | INFO     | sum of deviations: 1868288480.0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,594 | INFO     | mean x: 1718918779.5
[2024-06-21 00:52:40] 2024-06-20 22:52:26,594 | INFO     | mean y: 2372766.9743589745
[2024-06-21 00:52:40] 2024-06-20 22:52:26,594 | INFO     | -- intersect: -2725756341.1746135
[2024-06-21 00:52:40] 2024-06-20 22:52:26,594 | INFO     | intersect: -2725756341.1746135
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | chi2: 6.102298750645798e-05
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | -- intersect: -2725756341.1746135
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | current memory leak: 1.59 B/s (using 156 data points, chi2=0.00)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | ..............................
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | . Timing measurements:
[2024-06-21 00:52:40] 2024-06-20 22:52:26,595 | INFO     | . get job = 0 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . initial setup = 1 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . payload setup = 10 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . stage-in = 0 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . payload execution = 13545 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . stage-out = 1 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | . log creation = 0 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,596 | INFO     | ..............................
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | 
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | job summary report
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | --------------------------------------------------
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | PanDA job id: 6238875933
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | task id: 40024049
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | errors: (none)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,691 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | pilot state: finished 
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | transexitcode: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | exeerrorcode: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | exeerrordiag: 
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | exitcode: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | exitmsg: OK
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | cpuconsumptiontime: 51927 s
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | nevents: 400
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | neventsw: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | pid: 1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | pgrp: 1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | corecount: 4
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | event service: False
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | sizes: {0: 2386648, 1: 2386847, 11: 2387053, 12: 2387081, 13559: 2417001, 13560: 2417000, 13562: 2426168, 13564: 2426224, 13572: 2426394}
[2024-06-21 00:52:40] 2024-06-20 22:52:26,692 | INFO     | --------------------------------------------------
[2024-06-21 00:52:40] 2024-06-20 22:52:26,693 | INFO     | 
[2024-06-21 00:52:40] 2024-06-20 22:52:26,693 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2024-06-21 00:52:40] 2024-06-20 22:52:26,715 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,718 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 00:52:40] 2024-06-20 22:52:26,718 | INFO     | job 6238875933 has completed (purged errors)
[2024-06-21 00:52:40] 2024-06-20 22:52:26,718 | INFO     | overall cleanup function is called
[2024-06-21 00:52:40] 2024-06-20 22:52:27,725 | INFO     | --- collectZombieJob: --- 10, [1985113]
[2024-06-21 00:52:40] 2024-06-20 22:52:27,725 | INFO     | zombie collector waiting for pid 1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:27,725 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 00:52:40] 2024-06-20 22:52:28,730 | INFO     | collected zombie processes
[2024-06-21 00:52:40] 2024-06-20 22:52:28,730 | INFO     | will now attempt to kill all subprocesses of pid=1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:29,008 | INFO     | process IDs to be killed: [1985113] (in reverse order)
[2024-06-21 00:52:40] 2024-06-20 22:52:29,212 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 00:52:40] 2024-06-20 22:52:29,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 00:52:40] 2024-06-20 22:52:29,231 | INFO     | did not find any defunct processes belonging to 1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:29,244 | INFO     | did not find any defunct processes belonging to 1985113
[2024-06-21 00:52:40] 2024-06-20 22:52:29,244 | INFO     | ready for new job
[2024-06-21 00:52:40] 2024-06-20 22:52:29,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 00:52:40] 2024-06-20 22:52:29,246 | INFO     | *************************************
[2024-06-21 00:52:40] 2024-06-20 22:52:29,246 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 00:52:40] 2024-06-20 22:52:29,246 | INFO     | *************************************
[2024-06-21 00:52:40] 2024-06-20 22:52:29,247 | INFO     | 
[2024-06-21 00:52:40] 2024-06-20 22:52:29,253 | INFO     | architecture information:
[2024-06-21 00:52:40] 2024-06-20 22:52:29,254 | INFO     | executing command: cat /etc/os-release
[2024-06-21 00:52:40] 2024-06-20 22:52:29,278 | INFO     | cat /etc/os-release:
[2024-06-21 00:52:40] NAME="CentOS Linux"
[2024-06-21 00:52:40] VERSION="7 (Core)"
[2024-06-21 00:52:40] ID="centos"
[2024-06-21 00:52:40] ID_LIKE="rhel fedora"
[2024-06-21 00:52:40] VERSION_ID="7"
[2024-06-21 00:52:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 00:52:40] ANSI_COLOR="0;31"
[2024-06-21 00:52:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 00:52:40] HOME_URL="https://www.centos.org/"
[2024-06-21 00:52:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 00:52:40] 
[2024-06-21 00:52:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 00:52:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 00:52:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 00:52:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 00:52:40] 
[2024-06-21 00:52:40] 2024-06-20 22:52:29,279 | INFO     | *************************************
[2024-06-21 00:52:40] 2024-06-20 22:52:29,781 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2024-06-21 00:52:40] 2024-06-20 22:52:29,801 | INFO     | sufficient remaining disk space (3165326934016 B)
[2024-06-21 00:52:40] 2024-06-20 22:52:29,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 00:52:40] 2024-06-20 22:52:29,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 00:52:40] 2024-06-20 22:52:29,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 00:52:40] 2024-06-20 22:52:29,803 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 00:52:40] 2024-06-20 22:52:29,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 00:52:40] 2024-06-20 22:52:29,804 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 00:52:40] 2024-06-20 22:52:29,804 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 00:52:40] 2024-06-20 22:52:29,804 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 00:52:40] 2024-06-20 22:52:29,815 | INFO     | all data control threads have been joined
[2024-06-21 00:52:40] 2024-06-20 22:52:30,091 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 00:52:40] 2024-06-20 22:52:30,091 | INFO     | aborting loop
[2024-06-21 00:52:40] 2024-06-20 22:52:30,807 | INFO     | [job] retrieve thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:30,820 | INFO     | [data] control thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:30,935 | INFO     | [payload] validate_post thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:30,937 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,018 | INFO     | [data] copytool_in thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,097 | INFO     | [job] job monitor thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,130 | INFO     | all payload control threads have been joined
[2024-06-21 00:52:40] 2024-06-20 22:52:31,145 | INFO     | all job control threads have been joined
[2024-06-21 00:52:40] 2024-06-20 22:52:31,287 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,447 | INFO     | [job] validate thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,574 | INFO     | [payload] failed_post thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 00:52:40] 2024-06-20 22:52:31,808 | INFO     | [data] copytool_out thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:31,903 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:32,065 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:32,135 | INFO     | [payload] control thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:32,150 | INFO     | [job] control thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:32,705 | INFO     | [job] queue monitor thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:33,809 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 00:52:40] 2024-06-20 22:52:34,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47690024469568)>', '<ExcThread(monitor, started 47690213148416)>']
[2024-06-21 00:52:40] 2024-06-20 22:52:34,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 00:52:40] 2024-06-20 22:52:34,829 | INFO     | [monitor] control thread has ended
[2024-06-21 00:52:40] 2024-06-20 22:52:39,677 | INFO     | all workflow threads have been joined
[2024-06-21 00:52:40] 2024-06-20 22:52:39,677 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 00:52:40] 2024-06-20 22:52:39,677 | INFO     | traces error code: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:39,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 00:52:40] 2024-06-20 22:52:39,776 [wrapper] ==== pilot stdout END ====
[2024-06-21 00:52:40] 2024-06-20 22:52:39,780 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 00:52:40] 2024-06-20 22:52:39,783 [wrapper] pilotpid: 1977538
[2024-06-21 00:52:40] 2024-06-20 22:52:39,786 [wrapper] Pilot exit status: 0
[2024-06-21 00:52:40] 2024-06-20 22:52:39,794 [wrapper] pandaids: 6238875933
[2024-06-21 00:52:40] 2024-06-20 22:52:39,884 [wrapper] cleanup supervisor_pilot 3451365 1977539
[2024-06-21 00:52:40] 2024-06-20 22:52:39,887 [wrapper] Test setup, not cleaning
[2024-06-21 00:52:40] 2024-06-20 22:52:39,889 [wrapper] ==== wrapper stdout END ====
[2024-06-21 00:52:40] 2024-06-20 22:52:39,891 [wrapper] ==== wrapper stderr END ====
[2024-06-21 00:52:40] 2024-06-20 22:52:39,895 [wrapper] apfmon messages muted
[2024-06-21 00:52:40]  *** Error codes and diagnostics ***
[2024-06-21 00:52:40]     "exeErrorCode": 0,
[2024-06-21 00:52:40]     "exeErrorDiag": "",
[2024-06-21 00:52:40]     "pilotErrorCode": 0,
[2024-06-21 00:52:40]     "pilotErrorDiag": "",
[2024-06-21 00:52:40]  *** Listing of results directory ***
[2024-06-21 00:52:40] total 873784
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 00:52:40] -rwx------ 1 boinc boinc     32308 Jun 20 17:07 runpilot2-wrapper.sh
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:07 queuedata.json
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc       100 Jun 20 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 00:52:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 21:05 run_atlas
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc       105 Jun 20 21:05 job.xml
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc      6644 Jun 20 21:05 init_data.xml
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc 613507791 Jun 20 21:05 EVNT.40024047._000046.pool.root.1
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:05 start_atlas.sh
[2024-06-21 00:52:40] drwxrwx--x 2 boinc boinc      4096 Jun 20 21:05 shared
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc    482477 Jun 20 21:05 input.tar.gz
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc         0 Jun 20 21:05 boinc_lockfile
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc      2502 Jun 20 21:05 pandaJob.out
[2024-06-21 00:52:40] -rw------- 1 boinc boinc       424 Jun 20 21:05 setup.sh.local
[2024-06-21 00:52:40] -rw------- 1 boinc boinc   1020848 Jun 20 21:05 agis_schedconf.cvmfs.json
[2024-06-21 00:52:40] -rw------- 1 boinc boinc   1321251 Jun 20 21:05 cric_ddmendpoints.json
[2024-06-21 00:52:40] drwx------ 4 boinc boinc      4096 Jun 20 21:05 pilot3
[2024-06-21 00:52:40] -rw------- 1 boinc boinc 274244627 Jun 21 00:51 HITS.40024049._000859.pool.root.1
[2024-06-21 00:52:40] -rw------- 1 boinc boinc        95 Jun 21 00:51 pilot_heartbeat.json
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc       532 Jun 21 00:51 boinc_task_state.xml
[2024-06-21 00:52:40] -rw------- 1 boinc boinc      1035 Jun 21 00:52 memory_monitor_summary.json
[2024-06-21 00:52:40] -rw------- 1 boinc boinc         0 Jun 21 00:52 agis_ddmendpoints.agis.ALL.json
[2024-06-21 00:52:40] -rw------- 1 boinc boinc    331128 Jun 21 00:52 log.40024049._000859.job.log.tgz.1
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc      8192 Jun 21 00:52 boinc_mmap_file
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc        28 Jun 21 00:52 wrapper_checkpoint.txt
[2024-06-21 00:52:40] -rw------- 1 boinc boinc      7707 Jun 21 00:52 heartbeat.json
[2024-06-21 00:52:40] -rw------- 1 boinc boinc      4346 Jun 21 00:52 pilotlog.txt
[2024-06-21 00:52:40] -rw------- 1 boinc boinc   1404087 Jun 21 00:52 log.40024049._000859.job.log.1
[2024-06-21 00:52:40] -rw------- 1 boinc boinc       357 Jun 21 00:52 output.list
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc       620 Jun 21 00:52 runtime_log
[2024-06-21 00:52:40] -rw------- 1 boinc boinc   1751040 Jun 21 00:52 result.tar.gz
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc     11429 Jun 21 00:52 runtime_log.err
[2024-06-21 00:52:40] -rw------- 1 boinc boinc       658 Jun 21 00:52 l1TMDmgYYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm1KlKDmkIb9qn.diag
[2024-06-21 00:52:40] -rw-r--r-- 1 boinc boinc     21505 Jun 21 00:52 stderr.txt
[2024-06-21 00:52:40] HITS file was successfully produced:
[2024-06-21 00:52:40] -rw------- 1 boinc boinc 274244627 Jun 21 00:51 shared/HITS.pool.root.1
[2024-06-21 00:52:40]  *** Contents of shared directory: ***
[2024-06-21 00:52:40] total 869164
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc 613507791 Jun 20 21:05 ATLAS.root_0
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:05 start_atlas.sh
[2024-06-21 00:52:40] -rw-r--r-- 2 boinc boinc    482477 Jun 20 21:05 input.tar.gz
[2024-06-21 00:52:40] -rw------- 1 boinc boinc 274244627 Jun 21 00:51 HITS.pool.root.1
[2024-06-21 00:52:40] -rw------- 1 boinc boinc   1751040 Jun 21 00:52 result.tar.gz
00:52:41 (1972824): run_atlas exited; CPU time 51657.083479
00:52:41 (1972824): called boinc_finish(0)

</stderr_txt>
]]>

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