Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:02 (3396554): wrapper (7.7.26015): starting
07:52:02 (3396554): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 07:52:02] Arguments: --nthreads 4
[2024-06-22 07:52:02] Threads: 4
[2024-06-22 07:52:02] Checking for CVMFS
[2024-06-22 07:52:02] No cvmfs_config command found, will try listing directly
[2024-06-22 07:52:02] CVMFS is ok
[2024-06-22 07:52:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 07:52:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 07:52:02] Further information can be found at the LHC@home message board.
[2024-06-22 07:52:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 07:52:02] Checking for apptainer binary...
[2024-06-22 07:52:02] which: no apptainer in ((null))
[2024-06-22 07:52:02] apptainer is not installed, using version from CVMFS
[2024-06-22 07:52:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 07:52:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-22 07:52:04] apptainer works
[2024-06-22 07:52:04] Set ATHENA_PROC_NUMBER=4
[2024-06-22 07:52:04] Set ATHENA_CORE_NUMBER=4
[2024-06-22 07:52:04] Starting ATLAS job with PandaID=6238875948
[2024-06-22 07:52:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 11:57:37]  *** The last 200 lines of the pilot log: ***
[2024-06-22 11:57:37] 2024-06-22 09:57:15,439 | INFO     | model: linear, x: [1719035633.0, 1719035694.0, 1719035755.0, 1719035816.0, 1719035877.0, 1719035938.0, 1719035999.0, 1719036060.0, 1719036121.0, 1719036182.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,440 | INFO     | sum of square deviations: 4286517580.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,441 | INFO     | sum of deviations: 88325918893.50002
[2024-06-22 11:57:37] 2024-06-22 09:57:15,442 | INFO     | mean x: 1719042922.5
[2024-06-22 11:57:37] 2024-06-22 09:57:15,442 | INFO     | mean y: 2306690.1458333335
[2024-06-22 11:57:37] 2024-06-22 09:57:15,442 | INFO     | -- intersect: -35419464692.66982
[2024-06-22 11:57:37] 2024-06-22 09:57:15,442 | INFO     | intersect: -35419464692.66982
[2024-06-22 11:57:37] 2024-06-22 09:57:15,442 | INFO     | chi2: 3.9398330295308814
[2024-06-22 11:57:37] 2024-06-22 09:57:15,443 | INFO     | model: linear, x: [1719035633.0, 1719035694.0, 1719035755.0, 1719035816.0, 1719035877.0, 1719035938.0, 1719035999.0, 1719036060.0, 1719036121.0, 1719036182.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,443 | INFO     | sum of square deviations: 4024149870.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,444 | INFO     | sum of deviations: 100859582640.99995
[2024-06-22 11:57:37] 2024-06-22 09:57:15,444 | INFO     | mean x: 1719042770.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | mean y: 2313828.9276595744
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | -- intersect: -43083043805.684616
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | intersect: -43083043805.684616
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | chi2: 3.1953819527307568
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | current chi2=3.1953819527307568 (change=18.895498139644943 %)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,445 | INFO     | right removable region: 234
[2024-06-22 11:57:37] 2024-06-22 09:57:15,446 | INFO     | model: linear, x: [1719035938.0, 1719035999.0, 1719036060.0, 1719036121.0, 1719036182.0, 1719036243.0, 1719036304.0, 1719036365.0, 1719036426.0, 1719036487.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,446 | INFO     | sum of square deviations: 4024149870.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,447 | INFO     | sum of deviations: 36518382549.000015
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | mean x: 1719043075.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | mean y: 2336705.7361702127
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | -- intersect: -15597647057.06025
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | intersect: -15597647057.06025
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | chi2: 1.8051763027142527
[2024-06-22 11:57:37] 2024-06-22 09:57:15,448 | INFO     | current chi2=1.8051763027142527 (change=54.181400856746556 %)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,449 | INFO     | model: linear, x: [1719036243.0, 1719036304.0, 1719036365.0, 1719036426.0, 1719036487.0, 1719036548.0, 1719036609.0, 1719036670.0, 1719036731.0, 1719036792.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,449 | INFO     | sum of square deviations: 3772712597.5
[2024-06-22 11:57:37] 2024-06-22 09:57:15,450 | INFO     | sum of deviations: -1336416974.999998
[2024-06-22 11:57:37] 2024-06-22 09:57:15,450 | INFO     | mean x: 1719043227.5
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | mean y: 2359665.9304347825
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | -- intersect: 611300445.4406831
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | intersect: 611300445.4406831
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | chi2: 0.7962867410066452
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | current chi2=0.7962867410066452 (change=55.888699635079796 %)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,451 | INFO     | model: linear, x: [1719036548.0, 1719036609.0, 1719036670.0, 1719036731.0, 1719036792.0, 1719036853.0, 1719036914.0, 1719036975.0, 1719037036.0, 1719037097.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,452 | INFO     | sum of square deviations: 3531973200.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,453 | INFO     | sum of deviations: -4620928242.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,453 | INFO     | mean x: 1719043380.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,453 | INFO     | mean y: 2361724.2933333335
[2024-06-22 11:57:37] 2024-06-22 09:57:15,453 | INFO     | -- intersect: 2251409396.530806
[2024-06-22 11:57:37] 2024-06-22 09:57:15,454 | INFO     | intersect: 2251409396.530806
[2024-06-22 11:57:37] 2024-06-22 09:57:15,454 | INFO     | chi2: 0.7697144069067171
[2024-06-22 11:57:37] 2024-06-22 09:57:15,454 | INFO     | current chi2=0.7697144069067171 (change=3.337030837200182 %)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,454 | INFO     | left removable region: 30
[2024-06-22 11:57:37] 2024-06-22 09:57:15,454 | INFO     | model: linear, x: [1719037463.0, 1719037524.0, 1719037585.0, 1719037646.0, 1719037707.0, 1719037768.0, 1719037829.0, 1719037890.0, 1719037951.0, 1719038012.0, 1719
[2024-06-22 11:57:37] 2024-06-22 09:57:15,455 | INFO     | sum of square deviations: 2632440055.0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,456 | INFO     | sum of deviations: 5548021034.5
[2024-06-22 11:57:37] 2024-06-22 09:57:15,456 | INFO     | mean x: 1719043654.5
[2024-06-22 11:57:37] 2024-06-22 09:57:15,456 | INFO     | mean y: 2372972.132352941
[2024-06-22 11:57:37] 2024-06-22 09:57:15,456 | INFO     | -- intersect: -3620611846.1828175
[2024-06-22 11:57:37] 2024-06-22 09:57:15,456 | INFO     | intersect: -3620611846.1828175
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | chi2: 0.00013208776146613532
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | -- intersect: -3620611846.1828175
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | current memory leak: 2.11 B/s (using 204 data points, chi2=0.00)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | ..............................
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | . Timing measurements:
[2024-06-22 11:57:37] 2024-06-22 09:57:15,457 | INFO     | . get job = 0 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . initial setup = 1 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . payload setup = 18 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . stage-in = 0 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . payload execution = 14594 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . stage-out = 1 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | . log creation = 0 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,458 | INFO     | ..............................
[2024-06-22 11:57:37] 2024-06-22 09:57:15,558 | INFO     | 
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | job summary report
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | --------------------------------------------------
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | PanDA job id: 6238875948
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | task id: 40024049
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | errors: (none)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | pilot state: finished 
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | transexitcode: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | exeerrorcode: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | exeerrordiag: 
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | exitcode: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,559 | INFO     | exitmsg: OK
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | cpuconsumptiontime: 55005 s
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | nevents: 400
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | neventsw: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | pid: 3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | pgrp: 3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | corecount: 4
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | event service: False
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | sizes: {0: 2386667, 1: 2386866, 12: 2386866, 16: 2387100, 23: 2387128, 14616: 2417878, 14618: 2426860, 14619: 2426916, 14633: 2427086}
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | --------------------------------------------------
[2024-06-22 11:57:37] 2024-06-22 09:57:15,560 | INFO     | 
[2024-06-22 11:57:37] 2024-06-22 09:57:15,561 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | job 6238875948 has completed (purged errors)
[2024-06-22 11:57:37] 2024-06-22 09:57:15,590 | INFO     | overall cleanup function is called
[2024-06-22 11:57:37] 2024-06-22 09:57:16,597 | INFO     | --- collectZombieJob: --- 10, [3411929]
[2024-06-22 11:57:37] 2024-06-22 09:57:16,598 | INFO     | zombie collector waiting for pid 3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:16,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 11:57:37] 2024-06-22 09:57:17,602 | INFO     | collected zombie processes
[2024-06-22 11:57:37] 2024-06-22 09:57:17,602 | INFO     | will now attempt to kill all subprocesses of pid=3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:17,899 | INFO     | process IDs to be killed: [3411929] (in reverse order)
[2024-06-22 11:57:37] 2024-06-22 09:57:18,125 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 11:57:37] 2024-06-22 09:57:18,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 11:57:37] 2024-06-22 09:57:18,144 | INFO     | did not find any defunct processes belonging to 3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:18,161 | INFO     | did not find any defunct processes belonging to 3411929
[2024-06-22 11:57:37] 2024-06-22 09:57:18,162 | INFO     | ready for new job
[2024-06-22 11:57:37] 2024-06-22 09:57:18,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 11:57:37] 2024-06-22 09:57:18,164 | INFO     | *************************************
[2024-06-22 11:57:37] 2024-06-22 09:57:18,164 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 11:57:37] 2024-06-22 09:57:18,164 | INFO     | *************************************
[2024-06-22 11:57:37] 2024-06-22 09:57:18,164 | INFO     | 
[2024-06-22 11:57:37] 2024-06-22 09:57:18,170 | INFO     | architecture information:
[2024-06-22 11:57:37] 2024-06-22 09:57:18,171 | INFO     | executing command: cat /etc/os-release
[2024-06-22 11:57:37] 2024-06-22 09:57:18,195 | INFO     | cat /etc/os-release:
[2024-06-22 11:57:37] NAME="CentOS Linux"
[2024-06-22 11:57:37] VERSION="7 (Core)"
[2024-06-22 11:57:37] ID="centos"
[2024-06-22 11:57:37] ID_LIKE="rhel fedora"
[2024-06-22 11:57:37] VERSION_ID="7"
[2024-06-22 11:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 11:57:37] ANSI_COLOR="0;31"
[2024-06-22 11:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 11:57:37] HOME_URL="https://www.centos.org/"
[2024-06-22 11:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 11:57:37] 
[2024-06-22 11:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 11:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 11:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 11:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 11:57:37] 
[2024-06-22 11:57:37] 2024-06-22 09:57:18,195 | INFO     | *************************************
[2024-06-22 11:57:37] 2024-06-22 09:57:18,697 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-22 11:57:37] 2024-06-22 09:57:18,722 | INFO     | sufficient remaining disk space (3156470661120 B)
[2024-06-22 11:57:37] 2024-06-22 09:57:18,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 11:57:37] 2024-06-22 09:57:18,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 11:57:37] 2024-06-22 09:57:18,723 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 11:57:37] 2024-06-22 09:57:18,724 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 11:57:37] 2024-06-22 09:57:18,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 11:57:37] 2024-06-22 09:57:18,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 11:57:37] 2024-06-22 09:57:19,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 11:57:37] 2024-06-22 09:57:19,040 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 11:57:37] 2024-06-22 09:57:19,041 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 11:57:37] 2024-06-22 09:57:19,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 11:57:37] 2024-06-22 09:57:19,041 | INFO     | will abort loop
[2024-06-22 11:57:37] 2024-06-22 09:57:19,439 | INFO     | all job control threads have been joined
[2024-06-22 11:57:37] 2024-06-22 09:57:19,642 | INFO     | all payload control threads have been joined
[2024-06-22 11:57:37] 2024-06-22 09:57:19,723 | INFO     | all data control threads have been joined
[2024-06-22 11:57:37] 2024-06-22 09:57:19,727 | INFO     | [job] retrieve thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,045 | INFO     | [job] job monitor thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,285 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,300 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,414 | INFO     | [payload] failed_post thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,444 | INFO     | [job] control thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 11:57:37] 2024-06-22 09:57:20,650 | INFO     | [payload] control thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,728 | INFO     | [data] control thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,871 | INFO     | [payload] validate_post thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,965 | INFO     | [job] validate thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:20,979 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:21,037 | INFO     | [data] copytool_out thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:21,082 | INFO     | [data] copytool_in thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:21,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 11:57:37] 2024-06-22 09:57:21,575 | INFO     | [job] queue monitor thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:25,150 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:29,417 | INFO     | job.realtimelogging is not enabled
[2024-06-22 11:57:37] 2024-06-22 09:57:30,422 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 11:57:37] 2024-06-22 09:57:31,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47842721608768)>', '<ExcThread(monitor, started 47842906085120)>']
[2024-06-22 11:57:37] 2024-06-22 09:57:31,789 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 11:57:37] 2024-06-22 09:57:31,790 | INFO     | [monitor] control thread has ended
[2024-06-22 11:57:37] 2024-06-22 09:57:36,726 | INFO     | all workflow threads have been joined
[2024-06-22 11:57:37] 2024-06-22 09:57:36,726 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 11:57:37] 2024-06-22 09:57:36,727 | INFO     | traces error code: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:36,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 11:57:37] 2024-06-22 09:57:36,904 [wrapper] ==== pilot stdout END ====
[2024-06-22 11:57:37] 2024-06-22 09:57:36,907 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 11:57:37] 2024-06-22 09:57:36,912 [wrapper] pilotpid: 3403871
[2024-06-22 11:57:37] 2024-06-22 09:57:36,914 [wrapper] Pilot exit status: 0
[2024-06-22 11:57:37] 2024-06-22 09:57:37,011 [wrapper] pandaids: 6238875948
[2024-06-22 11:57:37] 2024-06-22 09:57:37,131 [wrapper] cleanup supervisor_pilot  260977 3403872
[2024-06-22 11:57:37] 2024-06-22 09:57:37,134 [wrapper] Test setup, not cleaning
[2024-06-22 11:57:37] 2024-06-22 09:57:37,135 [wrapper] ==== wrapper stdout END ====
[2024-06-22 11:57:37] 2024-06-22 09:57:37,137 [wrapper] ==== wrapper stderr END ====
[2024-06-22 11:57:37] 2024-06-22 09:57:37,141 [wrapper] apfmon messages muted
[2024-06-22 11:57:37]  *** Error codes and diagnostics ***
[2024-06-22 11:57:37]     "exeErrorCode": 0,
[2024-06-22 11:57:37]     "exeErrorDiag": "",
[2024-06-22 11:57:37]     "pilotErrorCode": 0,
[2024-06-22 11:57:37]     "pilotErrorDiag": "",
[2024-06-22 11:57:37]  *** Listing of results directory ***
[2024-06-22 11:57:37] total 876328
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-22 11:57:37] -rwx------ 1 boinc boinc     32308 Jun 20 17:04 runpilot2-wrapper.sh
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:04 queuedata.json
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc       100 Jun 22 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 11:57:37] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 07:51 run_atlas
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc       105 Jun 22 07:51 job.xml
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc      6642 Jun 22 07:52 init_data.xml
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc 613507791 Jun 22 07:52 EVNT.40024047._000046.pool.root.1
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:52 start_atlas.sh
[2024-06-22 11:57:37] drwxrwx--x 2 boinc boinc      4096 Jun 22 07:52 shared
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc    482479 Jun 22 07:52 input.tar.gz
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc         0 Jun 22 07:52 boinc_lockfile
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc      2502 Jun 22 07:52 pandaJob.out
[2024-06-22 11:57:37] -rw------- 1 boinc boinc       424 Jun 22 07:52 setup.sh.local
[2024-06-22 11:57:37] -rw------- 1 boinc boinc   1025961 Jun 22 07:52 agis_schedconf.cvmfs.json
[2024-06-22 11:57:37] -rw------- 1 boinc boinc   1321363 Jun 22 07:52 cric_ddmendpoints.json
[2024-06-22 11:57:37] drwx------ 4 boinc boinc      4096 Jun 22 07:52 pilot3
[2024-06-22 11:57:37] -rw------- 1 boinc boinc 276505165 Jun 22 11:56 HITS.40024049._000872.pool.root.1
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc       532 Jun 22 11:56 boinc_task_state.xml
[2024-06-22 11:57:37] -rw------- 1 boinc boinc        95 Jun 22 11:56 pilot_heartbeat.json
[2024-06-22 11:57:37] -rw------- 1 boinc boinc      1039 Jun 22 11:56 memory_monitor_summary.json
[2024-06-22 11:57:37] -rw------- 1 boinc boinc         0 Jun 22 11:57 agis_ddmendpoints.agis.ALL.json
[2024-06-22 11:57:37] -rw------- 1 boinc boinc    359347 Jun 22 11:57 log.40024049._000872.job.log.tgz.1
[2024-06-22 11:57:37] -rw------- 1 boinc boinc      7707 Jun 22 11:57 heartbeat.json
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc      8192 Jun 22 11:57 boinc_mmap_file
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc        28 Jun 22 11:57 wrapper_checkpoint.txt
[2024-06-22 11:57:37] -rw------- 1 boinc boinc      4603 Jun 22 11:57 pilotlog.txt
[2024-06-22 11:57:37] -rw------- 1 boinc boinc   1543837 Jun 22 11:57 log.40024049._000872.job.log.1
[2024-06-22 11:57:37] -rw------- 1 boinc boinc       357 Jun 22 11:57 output.list
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc       620 Jun 22 11:57 runtime_log
[2024-06-22 11:57:37] -rw------- 1 boinc boinc   1925120 Jun 22 11:57 result.tar.gz
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc     11410 Jun 22 11:57 runtime_log.err
[2024-06-22 11:57:37] -rw------- 1 boinc boinc       659 Jun 22 11:57 5SjLDmzVYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmXKlKDmYyEt9n.diag
[2024-06-22 11:57:37] -rw-r--r-- 1 boinc boinc     21395 Jun 22 11:57 stderr.txt
[2024-06-22 11:57:37] HITS file was successfully produced:
[2024-06-22 11:57:37] -rw------- 1 boinc boinc 276505165 Jun 22 11:56 shared/HITS.pool.root.1
[2024-06-22 11:57:37]  *** Contents of shared directory: ***
[2024-06-22 11:57:37] total 871540
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc 613507791 Jun 22 07:52 ATLAS.root_0
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc     17537 Jun 22 07:52 start_atlas.sh
[2024-06-22 11:57:37] -rw-r--r-- 2 boinc boinc    482479 Jun 22 07:52 input.tar.gz
[2024-06-22 11:57:37] -rw------- 1 boinc boinc 276505165 Jun 22 11:56 HITS.pool.root.1
[2024-06-22 11:57:37] -rw------- 1 boinc boinc   1925120 Jun 22 11:57 result.tar.gz
11:57:39 (3396554): run_atlas exited; CPU time 54684.920740
11:57:39 (3396554): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN