Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:36 (206220): wrapper (7.7.26015): starting
05:39:36 (206220): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:39:36] Arguments: --nthreads 4
[2024-06-21 05:39:36] Threads: 4
[2024-06-21 05:39:36] Checking for CVMFS
[2024-06-21 05:39:36] No cvmfs_config command found, will try listing directly
[2024-06-21 05:39:36] CVMFS is ok
[2024-06-21 05:39:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:39:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:39:36] Further information can be found at the LHC@home message board.
[2024-06-21 05:39:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:39:36] Checking for apptainer binary...
[2024-06-21 05:39:36] which: no apptainer in ((null))
[2024-06-21 05:39:36] apptainer is not installed, using version from CVMFS
[2024-06-21 05:39:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:39:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-21 05:39:37] apptainer works
[2024-06-21 05:39:37] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:39:37] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:39:37] Starting ATLAS job with PandaID=6238875853
[2024-06-21 05:39:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 09:41:07]  *** The last 200 lines of the pilot log: ***
[2024-06-21 09:41:07] 2024-06-21 07:40:46,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 09:41:07] 2024-06-21 07:40:46,382 | INFO     | fitting pss+swap vs Time
[2024-06-21 09:41:07] 2024-06-21 07:40:46,382 | INFO     | model: linear, x: [1718941229.0, 1718941290.0, 1718941351.0, 1718941412.0, 1718941473.0, 1718941534.0, 1718941595.0, 1718941656.0, 1718941717.0, 1718941778.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,382 | INFO     | sum of square deviations: 4127772278.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,384 | INFO     | sum of deviations: 101783473391.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,384 | INFO     | mean x: 1718948427.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,384 | INFO     | mean y: 2292274.4388185656
[2024-06-21 09:41:07] 2024-06-21 07:40:46,384 | INFO     | -- intersect: -42383898071.51413
[2024-06-21 09:41:07] 2024-06-21 07:40:46,384 | INFO     | intersect: -42383898071.51413
[2024-06-21 09:41:07] 2024-06-21 07:40:46,385 | INFO     | chi2: 4.9774776889694445
[2024-06-21 09:41:07] 2024-06-21 07:40:46,385 | INFO     | model: linear, x: [1718941229.0, 1718941290.0, 1718941351.0, 1718941412.0, 1718941473.0, 1718941534.0, 1718941595.0, 1718941656.0, 1718941717.0, 1718941778.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,385 | INFO     | sum of square deviations: 3871990738.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | sum of deviations: 114557764997.50002
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | mean x: 1718948274.5
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | mean y: 2299734.8663793104
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | -- intersect: -50854968734.41299
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | intersect: -50854968734.41299
[2024-06-21 09:41:07] 2024-06-21 07:40:46,387 | INFO     | chi2: 4.178749653555532
[2024-06-21 09:41:07] 2024-06-21 07:40:46,388 | INFO     | current chi2=4.178749653555532 (change=16.046843106579228 %)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,388 | INFO     | right removable region: 231
[2024-06-21 09:41:07] 2024-06-21 07:40:46,388 | INFO     | model: linear, x: [1718941534.0, 1718941595.0, 1718941656.0, 1718941717.0, 1718941778.0, 1718941839.0, 1718941900.0, 1718941961.0, 1718942022.0, 1718942083.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,388 | INFO     | sum of square deviations: 3871990738.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | sum of deviations: 46243636644.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | mean x: 1718948579.5
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | mean y: 2325316.146551724
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | -- intersect: -20527277903.19822
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | intersect: -20527277903.19822
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | chi2: 2.483252413478012
[2024-06-21 09:41:07] 2024-06-21 07:40:46,390 | INFO     | current chi2=2.483252413478012 (change=50.110225125044124 %)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,391 | INFO     | model: linear, x: [1718941839.0, 1718941900.0, 1718941961.0, 1718942022.0, 1718942083.0, 1718942144.0, 1718942205.0, 1718942266.0, 1718942327.0, 1718942388.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,391 | INFO     | sum of square deviations: 3627000098.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,392 | INFO     | sum of deviations: 461073319.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,392 | INFO     | mean x: 1718948732.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | mean y: 2353816.7753303964
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | -- intersect: -216163242.9543111
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | intersect: -216163242.9543111
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | chi2: 0.9292019520785259
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | current chi2=0.9292019520785259 (change=62.58125243188238 %)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,393 | INFO     | model: linear, x: [1718942144.0, 1718942205.0, 1718942266.0, 1718942327.0, 1718942388.0, 1718942449.0, 1718942510.0, 1718942571.0, 1718942632.0, 1718942693.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,394 | INFO     | sum of square deviations: 3392567795.5
[2024-06-21 09:41:07] 2024-06-21 07:40:46,395 | INFO     | sum of deviations: -8608660136.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,395 | INFO     | mean x: 1718948884.5
[2024-06-21 09:41:07] 2024-06-21 07:40:46,395 | INFO     | mean y: 2359667.738738739
[2024-06-21 09:41:07] 2024-06-21 07:40:46,395 | INFO     | -- intersect: 4364202268.922748
[2024-06-21 09:41:07] 2024-06-21 07:40:46,395 | INFO     | intersect: 4364202268.922748
[2024-06-21 09:41:07] 2024-06-21 07:40:46,396 | INFO     | chi2: 0.8363483552362558
[2024-06-21 09:41:07] 2024-06-21 07:40:46,396 | INFO     | current chi2=0.8363483552362558 (change=9.9928327350762 %)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,396 | INFO     | left removable region: 30
[2024-06-21 09:41:07] 2024-06-21 07:40:46,396 | INFO     | model: linear, x: [1718943059.0, 1718943120.0, 1718943181.0, 1718943242.0, 1718943303.0, 1718943364.0, 1718943425.0, 1718943486.0, 1718943547.0, 1718943608.0, 1718
[2024-06-21 09:41:07] 2024-06-21 07:40:46,396 | INFO     | sum of square deviations: 2518000700.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | sum of deviations: 4397023472.000001
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | mean x: 1718949159.0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | mean y: 2370018.4378109453
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | -- intersect: -2999320886.2937336
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | intersect: -2999320886.2937336
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | chi2: 0.0006246100427480447
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | -- intersect: -2999320886.2937336
[2024-06-21 09:41:07] 2024-06-21 07:40:46,398 | INFO     | current memory leak: 1.75 B/s (using 201 data points, chi2=0.00)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | ..............................
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . Timing measurements:
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . get job = 0 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . initial setup = 1 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . payload setup = 8 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . stage-in = 0 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . payload execution = 14413 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . stage-out = 0 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,399 | INFO     | . log creation = 0 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,400 | INFO     | ..............................
[2024-06-21 09:41:07] 2024-06-21 07:40:46,496 | INFO     | 
[2024-06-21 09:41:07] 2024-06-21 07:40:46,496 | INFO     | job summary report
[2024-06-21 09:41:07] 2024-06-21 07:40:46,496 | INFO     | --------------------------------------------------
[2024-06-21 09:41:07] 2024-06-21 07:40:46,496 | INFO     | PanDA job id: 6238875853
[2024-06-21 09:41:07] 2024-06-21 07:40:46,496 | INFO     | task id: 40024049
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | errors: (none)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | pilot state: finished 
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | transexitcode: 0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | exeerrorcode: 0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | exeerrordiag: 
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | exitcode: 0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | exitmsg: OK
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | cpuconsumptiontime: 54417 s
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | nevents: 400
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | neventsw: 0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | pid: 219529
[2024-06-21 09:41:07] 2024-06-21 07:40:46,497 | INFO     | pgrp: 219529
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | corecount: 4
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | event service: False
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | sizes: {0: 2386691, 1: 2386890, 7: 2387096, 11: 2387124, 14425: 2417578, 14427: 2426746, 14434: 2426860}
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | --------------------------------------------------
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | 
[2024-06-21 09:41:07] 2024-06-21 07:40:46,498 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-06-21 09:41:07] 2024-06-21 07:40:46,524 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | job 6238875853 has completed (purged errors)
[2024-06-21 09:41:07] 2024-06-21 07:40:46,526 | INFO     | overall cleanup function is called
[2024-06-21 09:41:07] 2024-06-21 07:40:47,223 | INFO     | 14455s have passed since pilot start
[2024-06-21 09:41:07] 2024-06-21 07:40:47,533 | INFO     | --- collectZombieJob: --- 10, [219529]
[2024-06-21 09:41:07] 2024-06-21 07:40:47,534 | INFO     | zombie collector waiting for pid 219529
[2024-06-21 09:41:07] 2024-06-21 07:40:47,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 09:41:07] 2024-06-21 07:40:48,538 | INFO     | collected zombie processes
[2024-06-21 09:41:07] 2024-06-21 07:40:48,539 | INFO     | will now attempt to kill all subprocesses of pid=219529
[2024-06-21 09:41:07] 2024-06-21 07:40:48,747 | INFO     | process IDs to be killed: [219529] (in reverse order)
[2024-06-21 09:41:07] 2024-06-21 07:40:48,954 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 09:41:07] 2024-06-21 07:40:48,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 09:41:07] 2024-06-21 07:40:48,971 | INFO     | did not find any defunct processes belonging to 219529
[2024-06-21 09:41:07] 2024-06-21 07:40:48,979 | INFO     | did not find any defunct processes belonging to 219529
[2024-06-21 09:41:07] 2024-06-21 07:40:48,979 | INFO     | ready for new job
[2024-06-21 09:41:07] 2024-06-21 07:40:48,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 09:41:07] 2024-06-21 07:40:48,981 | INFO     | *************************************
[2024-06-21 09:41:07] 2024-06-21 07:40:48,981 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 09:41:07] 2024-06-21 07:40:48,981 | INFO     | *************************************
[2024-06-21 09:41:07] 2024-06-21 07:40:48,981 | INFO     | 
[2024-06-21 09:41:07] 2024-06-21 07:40:48,986 | INFO     | architecture information:
[2024-06-21 09:41:07] 2024-06-21 07:40:48,986 | INFO     | executing command: cat /etc/os-release
[2024-06-21 09:41:07] 2024-06-21 07:40:49,000 | INFO     | cat /etc/os-release:
[2024-06-21 09:41:07] NAME="CentOS Linux"
[2024-06-21 09:41:07] VERSION="7 (Core)"
[2024-06-21 09:41:07] ID="centos"
[2024-06-21 09:41:07] ID_LIKE="rhel fedora"
[2024-06-21 09:41:07] VERSION_ID="7"
[2024-06-21 09:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 09:41:07] ANSI_COLOR="0;31"
[2024-06-21 09:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 09:41:07] HOME_URL="https://www.centos.org/"
[2024-06-21 09:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 09:41:07] 
[2024-06-21 09:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 09:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 09:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 09:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 09:41:07] 
[2024-06-21 09:41:07] 2024-06-21 07:40:49,000 | INFO     | *************************************
[2024-06-21 09:41:07] 2024-06-21 07:40:49,503 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-06-21 09:41:07] 2024-06-21 07:40:49,520 | INFO     | sufficient remaining disk space (3274793025536 B)
[2024-06-21 09:41:07] 2024-06-21 07:40:49,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 09:41:07] 2024-06-21 07:40:49,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 09:41:07] 2024-06-21 07:40:49,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 09:41:07] 2024-06-21 07:40:49,521 | INFO     | aborting loop
[2024-06-21 09:41:07] 2024-06-21 07:40:50,159 | INFO     | all payload control threads have been joined
[2024-06-21 09:41:07] 2024-06-21 07:40:50,227 | INFO     | all job control threads have been joined
[2024-06-21 09:41:07] 2024-06-21 07:40:50,233 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 09:41:07] 2024-06-21 07:40:50,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 09:41:07] 2024-06-21 07:40:50,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 09:41:07] 2024-06-21 07:40:50,398 | INFO     | all data control threads have been joined
[2024-06-21 09:41:07] 2024-06-21 07:40:50,526 | INFO     | [job] retrieve thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:50,527 | INFO     | [job] job monitor thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:50,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 09:41:07] 2024-06-21 07:40:50,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 09:41:07] 2024-06-21 07:40:50,761 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,076 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,152 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,165 | INFO     | [payload] control thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,199 | INFO     | [data] copytool_in thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,233 | INFO     | [job] control thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,403 | INFO     | [data] control thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 09:41:07] 2024-06-21 07:40:51,721 | INFO     | [job] validate thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:51,844 | INFO     | [payload] failed_post thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:52,069 | INFO     | [payload] validate_post thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:52,511 | INFO     | [job] queue monitor thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:52,643 | INFO     | [data] copytool_out thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:40:54,715 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:41:00,550 | INFO     | job.realtimelogging is not enabled
[2024-06-21 09:41:07] 2024-06-21 07:41:01,555 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 09:41:07] 2024-06-21 07:41:01,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47131236209728)>', '<ExcThread(monitor, started 47131424888576)>']
[2024-06-21 09:41:07] 2024-06-21 07:41:02,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 09:41:07] 2024-06-21 07:41:02,294 | INFO     | [monitor] control thread has ended
[2024-06-21 09:41:07] 2024-06-21 07:41:07,000 | INFO     | all workflow threads have been joined
[2024-06-21 09:41:07] 2024-06-21 07:41:07,000 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 09:41:07] 2024-06-21 07:41:07,000 | INFO     | traces error code: 0
[2024-06-21 09:41:07] 2024-06-21 07:41:07,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 09:41:07] 2024-06-21 07:41:07,112 [wrapper] ==== pilot stdout END ====
[2024-06-21 09:41:07] 2024-06-21 07:41:07,114 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 09:41:07] 2024-06-21 07:41:07,116 [wrapper] pilotpid: 210930
[2024-06-21 09:41:07] 2024-06-21 07:41:07,119 [wrapper] Pilot exit status: 0
[2024-06-21 09:41:07] 2024-06-21 07:41:07,127 [wrapper] pandaids: 6238875853
[2024-06-21 09:41:07] 2024-06-21 07:41:07,226 [wrapper] cleanup supervisor_pilot 1353435 210931
[2024-06-21 09:41:07] 2024-06-21 07:41:07,229 [wrapper] Test setup, not cleaning
[2024-06-21 09:41:07] 2024-06-21 07:41:07,230 [wrapper] ==== wrapper stdout END ====
[2024-06-21 09:41:07] 2024-06-21 07:41:07,232 [wrapper] ==== wrapper stderr END ====
[2024-06-21 09:41:07] 2024-06-21 07:41:07,236 [wrapper] apfmon messages muted
[2024-06-21 09:41:07]  *** Error codes and diagnostics ***
[2024-06-21 09:41:07]     "exeErrorCode": 0,
[2024-06-21 09:41:07]     "exeErrorDiag": "",
[2024-06-21 09:41:07]     "pilotErrorCode": 0,
[2024-06-21 09:41:07]     "pilotErrorDiag": "",
[2024-06-21 09:41:07]  *** Listing of results directory ***
[2024-06-21 09:41:07] total 880244
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 09:41:07] -rwx------ 1 boinc boinc     32308 Jun 20 17:01 runpilot2-wrapper.sh
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:02 queuedata.json
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 09:41:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:39 run_atlas
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:39 job.xml
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc      6644 Jun 21 05:39 init_data.xml
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc 614508168 Jun 21 05:39 EVNT.40024047._000043.pool.root.1
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:39 start_atlas.sh
[2024-06-21 09:41:07] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:39 shared
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc    482477 Jun 21 05:39 input.tar.gz
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:39 boinc_lockfile
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc      2495 Jun 21 05:39 pandaJob.out
[2024-06-21 09:41:07] -rw------- 1 boinc boinc       424 Jun 21 05:39 setup.sh.local
[2024-06-21 09:41:07] -rw------- 1 boinc boinc   1024126 Jun 21 05:39 agis_schedconf.cvmfs.json
[2024-06-21 09:41:07] -rw------- 1 boinc boinc   1321251 Jun 21 05:39 cric_ddmendpoints.json
[2024-06-21 09:41:07] drwx------ 4 boinc boinc      4096 Jun 21 05:39 pilot3
[2024-06-21 09:41:07] -rw------- 1 boinc boinc 279805879 Jun 21 09:40 HITS.40024049._000781.pool.root.1
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc       532 Jun 21 09:40 boinc_task_state.xml
[2024-06-21 09:41:07] -rw------- 1 boinc boinc      1037 Jun 21 09:40 memory_monitor_summary.json
[2024-06-21 09:41:07] -rw------- 1 boinc boinc         0 Jun 21 09:40 agis_ddmendpoints.agis.ALL.json
[2024-06-21 09:41:07] -rw------- 1 boinc boinc    331481 Jun 21 09:40 log.40024049._000781.job.log.tgz.1
[2024-06-21 09:41:07] -rw------- 1 boinc boinc        95 Jun 21 09:40 pilot_heartbeat.json
[2024-06-21 09:41:07] -rw------- 1 boinc boinc      7721 Jun 21 09:40 heartbeat.json
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc        28 Jun 21 09:40 wrapper_checkpoint.txt
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc      8192 Jun 21 09:40 boinc_mmap_file
[2024-06-21 09:41:07] -rw------- 1 boinc boinc      4295 Jun 21 09:41 pilotlog.txt
[2024-06-21 09:41:07] -rw------- 1 boinc boinc   1428145 Jun 21 09:41 log.40024049._000781.job.log.1
[2024-06-21 09:41:07] -rw------- 1 boinc boinc       357 Jun 21 09:41 output.list
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc       620 Jun 21 09:41 runtime_log
[2024-06-21 09:41:07] -rw------- 1 boinc boinc   1781760 Jun 21 09:41 result.tar.gz
[2024-06-21 09:41:07] -rw------- 1 boinc boinc       657 Jun 21 09:41 t8oKDmxSYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmmoqKDmhdr3Mo.diag
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc     11429 Jun 21 09:41 runtime_log.err
[2024-06-21 09:41:07] -rw-r--r-- 1 boinc boinc     21243 Jun 21 09:41 stderr.txt
[2024-06-21 09:41:07] HITS file was successfully produced:
[2024-06-21 09:41:07] -rw------- 1 boinc boinc 279805879 Jun 21 09:40 shared/HITS.pool.root.1
[2024-06-21 09:41:07]  *** Contents of shared directory: ***
[2024-06-21 09:41:07] total 875596
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc 614508168 Jun 21 05:39 ATLAS.root_0
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:39 start_atlas.sh
[2024-06-21 09:41:07] -rw-r--r-- 2 boinc boinc    482477 Jun 21 05:39 input.tar.gz
[2024-06-21 09:41:07] -rw------- 1 boinc boinc 279805879 Jun 21 09:40 HITS.pool.root.1
[2024-06-21 09:41:07] -rw------- 1 boinc boinc   1781760 Jun 21 09:41 result.tar.gz
09:41:09 (206220): run_atlas exited; CPU time 54086.841218
09:41:09 (206220): called boinc_finish(0)

</stderr_txt>
]]>

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