Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:12:04 (4077280): wrapper (7.7.26015): starting
05:12:04 (4077280): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:12:04] Arguments: --nthreads 4
[2024-06-21 05:12:04] Threads: 4
[2024-06-21 05:12:04] Checking for CVMFS
[2024-06-21 05:12:04] No cvmfs_config command found, will try listing directly
[2024-06-21 05:12:04] CVMFS is ok
[2024-06-21 05:12:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:12:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:12:04] Further information can be found at the LHC@home message board.
[2024-06-21 05:12:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:12:04] Checking for apptainer binary...
[2024-06-21 05:12:04] which: no apptainer in ((null))
[2024-06-21 05:12:04] apptainer is not installed, using version from CVMFS
[2024-06-21 05:12:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:12:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-21 05:12:05] apptainer works
[2024-06-21 05:12:05] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:12:05] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:12:05] Starting ATLAS job with PandaID=6238878046
[2024-06-21 05:12:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 15:56:15]  *** The last 200 lines of the pilot log: ***
[2024-06-21 15:56:15] 2024-06-21 13:55:52,315 | INFO     | sum of square deviations: 76799121817.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,324 | INFO     | sum of deviations: 433815890022.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,324 | INFO     | mean x: 1718958692.5
[2024-06-21 15:56:15] 2024-06-21 13:55:52,324 | INFO     | mean y: 2342640.8757961784
[2024-06-21 15:56:15] 2024-06-21 13:55:52,325 | INFO     | -- intersect: -9707554783.144913
[2024-06-21 15:56:15] 2024-06-21 13:55:52,325 | INFO     | intersect: -9707554783.144913
[2024-06-21 15:56:15] 2024-06-21 13:55:52,325 | INFO     | chi2: 4.656501348880065
[2024-06-21 15:56:15] 2024-06-21 13:55:52,325 | INFO     | current chi2=4.656501348880065 (change=14.440188695927091 %)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,326 | INFO     | right removable region: 627
[2024-06-21 15:56:15] 2024-06-21 13:55:52,326 | INFO     | model: linear, x: [1718939874.0, 1718939935.0, 1718939996.0, 1718940057.0, 1718940118.0, 1718940179.0, 1718940240.0, 1718940301.0, 1718940362.0, 1718940423.0, 1718
[2024-06-21 15:56:15] 2024-06-21 13:55:52,326 | INFO     | sum of square deviations: 76799121817.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,335 | INFO     | sum of deviations: 239659183666.50003
[2024-06-21 15:56:15] 2024-06-21 13:55:52,336 | INFO     | mean x: 1718958997.5
[2024-06-21 15:56:15] 2024-06-21 13:55:52,336 | INFO     | mean y: 2352569.189490446
[2024-06-21 15:56:15] 2024-06-21 13:55:52,336 | INFO     | -- intersect: -5361827389.517332
[2024-06-21 15:56:15] 2024-06-21 13:55:52,336 | INFO     | intersect: -5361827389.517332
[2024-06-21 15:56:15] 2024-06-21 13:55:52,337 | INFO     | chi2: 2.8476336769871864
[2024-06-21 15:56:15] 2024-06-21 13:55:52,337 | INFO     | current chi2=2.8476336769871864 (change=47.67681101934061 %)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,337 | INFO     | model: linear, x: [1718940179.0, 1718940240.0, 1718940301.0, 1718940362.0, 1718940423.0, 1718940484.0, 1718940545.0, 1718940606.0, 1718940667.0, 1718940728.0, 1718
[2024-06-21 15:56:15] 2024-06-21 13:55:52,338 | INFO     | sum of square deviations: 74979310952.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,346 | INFO     | sum of deviations: 109605999870.00003
[2024-06-21 15:56:15] 2024-06-21 13:55:52,346 | INFO     | mean x: 1718959150.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,347 | INFO     | mean y: 2363467.7560192617
[2024-06-21 15:56:15] 2024-06-21 13:55:52,347 | INFO     | -- intersect: -2510439517.2173944
[2024-06-21 15:56:15] 2024-06-21 13:55:52,347 | INFO     | intersect: -2510439517.2173944
[2024-06-21 15:56:15] 2024-06-21 13:55:52,347 | INFO     | chi2: 1.1954115924960835
[2024-06-21 15:56:15] 2024-06-21 13:55:52,348 | INFO     | current chi2=1.1954115924960835 (change=58.020878803454934 %)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,348 | INFO     | model: linear, x: [1718940484.0, 1718940545.0, 1718940606.0, 1718940667.0, 1718940728.0, 1718940789.0, 1718940850.0, 1718940911.0, 1718940972.0, 1718941033.0, 1718
[2024-06-21 15:56:15] 2024-06-21 13:55:52,348 | INFO     | sum of square deviations: 73188477374.5
[2024-06-21 15:56:15] 2024-06-21 13:55:52,357 | INFO     | sum of deviations: 62760340836.499985
[2024-06-21 15:56:15] 2024-06-21 13:55:52,357 | INFO     | mean x: 1718959302.5
[2024-06-21 15:56:15] 2024-06-21 13:55:52,357 | INFO     | mean y: 2367443.784789644
[2024-06-21 15:56:15] 2024-06-21 13:55:52,357 | INFO     | -- intersect: -1471668846.8862908
[2024-06-21 15:56:15] 2024-06-21 13:55:52,357 | INFO     | intersect: -1471668846.8862908
[2024-06-21 15:56:15] 2024-06-21 13:55:52,358 | INFO     | chi2: 0.8174901787398369
[2024-06-21 15:56:15] 2024-06-21 13:55:52,358 | INFO     | current chi2=0.8174901787398369 (change=31.61433401922483 %)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,359 | INFO     | model: linear, x: [1718940789.0, 1718940850.0, 1718940911.0, 1718940972.0, 1718941033.0, 1718941094.0, 1718941155.0, 1718941216.0, 1718941277.0, 1718941338.0, 1718
[2024-06-21 15:56:15] 2024-06-21 13:55:52,359 | INFO     | sum of square deviations: 71426388522.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,368 | INFO     | sum of deviations: 53035511026.99997
[2024-06-21 15:56:15] 2024-06-21 13:55:52,368 | INFO     | mean x: 1718959455.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,368 | INFO     | mean y: 2368283.756933116
[2024-06-21 15:56:15] 2024-06-21 13:55:52,368 | INFO     | -- intersect: -1273993226.5627215
[2024-06-21 15:56:15] 2024-06-21 13:55:52,368 | INFO     | intersect: -1273993226.5627215
[2024-06-21 15:56:15] 2024-06-21 13:55:52,369 | INFO     | chi2: 0.8084155655940259
[2024-06-21 15:56:15] 2024-06-21 13:55:52,369 | INFO     | current chi2=0.8084155655940259 (change=1.1100577574888382 %)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,369 | INFO     | left removable region: 40
[2024-06-21 15:56:15] 2024-06-21 13:55:52,369 | INFO     | model: linear, x: [1718942009.0, 1718942070.0, 1718942131.0, 1718942192.0, 1718942253.0, 1718942314.0, 1718942375.0, 1718942436.0, 1718942497.0, 1718942558.0, 1718
[2024-06-21 15:56:15] 2024-06-21 13:55:52,370 | INFO     | sum of square deviations: 62717894078.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,378 | INFO     | sum of deviations: 74966247497.00002
[2024-06-21 15:56:15] 2024-06-21 13:55:52,378 | INFO     | mean x: 1718959882.0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,378 | INFO     | mean y: 2373116.2879045997
[2024-06-21 15:56:15] 2024-06-21 13:55:52,378 | INFO     | -- intersect: -2052287261.676356
[2024-06-21 15:56:15] 2024-06-21 13:55:52,378 | INFO     | intersect: -2052287261.676356
[2024-06-21 15:56:15] 2024-06-21 13:55:52,379 | INFO     | chi2: 0.0026839639940496917
[2024-06-21 15:56:15] 2024-06-21 13:55:52,379 | INFO     | -- intersect: -2052287261.676356
[2024-06-21 15:56:15] 2024-06-21 13:55:52,379 | INFO     | current memory leak: 1.20 B/s (using 587 data points, chi2=0.00)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | ..............................
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . Timing measurements:
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . get job = 0 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . initial setup = 1 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . payload setup = 8 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . stage-in = 0 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . payload execution = 38574 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . stage-out = 1 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | . log creation = 0 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,381 | INFO     | ..............................
[2024-06-21 15:56:15] 2024-06-21 13:55:52,481 | INFO     | 
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | job summary report
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | --------------------------------------------------
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | PanDA job id: 6238878046
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | task id: 38921013
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | errors: (none)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | pilot state: finished 
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | transexitcode: 0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | exeerrorcode: 0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | exeerrordiag: 
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | exitcode: 0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,482 | INFO     | exitmsg: OK
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | cpuconsumptiontime: 150107 s
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | nevents: 400
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | neventsw: 0
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | pid: 4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | pgrp: 4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | corecount: 4
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | event service: False
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | sizes: {0: 2386879, 1: 2387078, 8: 2387284, 11: 2387312, 38585: 2428704, 38586: 2428703, 38588: 2437925, 38598: 2438039}
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | --------------------------------------------------
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | 
[2024-06-21 15:56:15] 2024-06-21 13:55:52,483 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-21 15:56:15] 2024-06-21 13:55:52,667 | WARNING  | process 4089469 is no longer using CPU - aborting
[2024-06-21 15:56:15] 2024-06-21 13:55:52,668 | INFO     | aborting job monitoring since job object (job id=6238878046) has expired
[2024-06-21 15:56:15] 2024-06-21 13:55:52,685 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,685 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | job 6238878046 has completed (purged errors)
[2024-06-21 15:56:15] 2024-06-21 13:55:52,687 | INFO     | overall cleanup function is called
[2024-06-21 15:56:15] 2024-06-21 13:55:53,694 | INFO     | --- collectZombieJob: --- 10, [4089469]
[2024-06-21 15:56:15] 2024-06-21 13:55:53,694 | INFO     | zombie collector waiting for pid 4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:53,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 15:56:15] 2024-06-21 13:55:54,698 | INFO     | collected zombie processes
[2024-06-21 15:56:15] 2024-06-21 13:55:54,699 | INFO     | will now attempt to kill all subprocesses of pid=4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:54,992 | INFO     | process IDs to be killed: [4089469] (in reverse order)
[2024-06-21 15:56:15] 2024-06-21 13:55:55,207 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 15:56:15] 2024-06-21 13:55:55,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 15:56:15] 2024-06-21 13:55:55,219 | INFO     | did not find any defunct processes belonging to 4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:55,229 | INFO     | did not find any defunct processes belonging to 4089469
[2024-06-21 15:56:15] 2024-06-21 13:55:55,229 | INFO     | ready for new job
[2024-06-21 15:56:15] 2024-06-21 13:55:55,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 15:56:15] 2024-06-21 13:55:55,231 | INFO     | *************************************
[2024-06-21 15:56:15] 2024-06-21 13:55:55,232 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 15:56:15] 2024-06-21 13:55:55,232 | INFO     | *************************************
[2024-06-21 15:56:15] 2024-06-21 13:55:55,232 | INFO     | 
[2024-06-21 15:56:15] 2024-06-21 13:55:55,237 | INFO     | architecture information:
[2024-06-21 15:56:15] 2024-06-21 13:55:55,237 | INFO     | executing command: cat /etc/os-release
[2024-06-21 15:56:15] 2024-06-21 13:55:55,260 | INFO     | cat /etc/os-release:
[2024-06-21 15:56:15] NAME="CentOS Linux"
[2024-06-21 15:56:15] VERSION="7 (Core)"
[2024-06-21 15:56:15] ID="centos"
[2024-06-21 15:56:15] ID_LIKE="rhel fedora"
[2024-06-21 15:56:15] VERSION_ID="7"
[2024-06-21 15:56:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 15:56:15] ANSI_COLOR="0;31"
[2024-06-21 15:56:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 15:56:15] HOME_URL="https://www.centos.org/"
[2024-06-21 15:56:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 15:56:15] 
[2024-06-21 15:56:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 15:56:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 15:56:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 15:56:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 15:56:15] 
[2024-06-21 15:56:15] 2024-06-21 13:55:55,260 | INFO     | *************************************
[2024-06-21 15:56:15] 2024-06-21 13:55:55,763 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-21 15:56:15] 2024-06-21 13:55:55,788 | INFO     | sufficient remaining disk space (3264444628992 B)
[2024-06-21 15:56:15] 2024-06-21 13:55:55,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 15:56:15] 2024-06-21 13:55:55,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 15:56:15] 2024-06-21 13:55:55,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 15:56:15] 2024-06-21 13:55:55,789 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 15:56:15] 2024-06-21 13:55:55,790 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 15:56:15] 2024-06-21 13:55:55,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 15:56:15] 2024-06-21 13:55:55,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 15:56:15] 2024-06-21 13:55:55,853 | INFO     | all data control threads have been joined
[2024-06-21 15:56:15] 2024-06-21 13:55:56,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 15:56:15] 2024-06-21 13:55:56,176 | INFO     | aborting loop
[2024-06-21 15:56:15] 2024-06-21 13:55:56,794 | INFO     | [job] retrieve thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:56,798 | INFO     | all job control threads have been joined
[2024-06-21 15:56:15] 2024-06-21 13:55:56,858 | INFO     | [data] control thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:56,959 | INFO     | [job] validate thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,012 | INFO     | all payload control threads have been joined
[2024-06-21 15:56:15] 2024-06-21 13:55:57,062 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,181 | INFO     | [job] job monitor thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,419 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 15:56:15] 2024-06-21 13:55:57,600 | INFO     | [payload] validate_post thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 15:56:15] 2024-06-21 13:55:57,795 | INFO     | [data] copytool_out thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,804 | INFO     | [job] control thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,981 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:57,983 | INFO     | [payload] failed_post thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:58,017 | INFO     | [payload] control thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:58,141 | INFO     | [data] copytool_in thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:55:58,498 | INFO     | [job] queue monitor thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:56:01,609 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:56:06,226 | INFO     | job.realtimelogging is not enabled
[2024-06-21 15:56:15] 2024-06-21 13:56:07,232 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 15:56:15] 2024-06-21 13:56:09,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47119713305664)>', '<ExcThread(monitor, started 47119968794368)>']
[2024-06-21 15:56:15] 2024-06-21 13:56:09,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 15:56:15] 2024-06-21 13:56:09,854 | INFO     | [monitor] control thread has ended
[2024-06-21 15:56:15] 2024-06-21 13:56:14,284 | INFO     | all workflow threads have been joined
[2024-06-21 15:56:15] 2024-06-21 13:56:14,284 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 15:56:15] 2024-06-21 13:56:14,284 | INFO     | traces error code: 0
[2024-06-21 15:56:15] 2024-06-21 13:56:14,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 15:56:15] 2024-06-21 13:56:14,431 [wrapper] ==== pilot stdout END ====
[2024-06-21 15:56:15] 2024-06-21 13:56:14,437 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 15:56:15] 2024-06-21 13:56:14,439 [wrapper] pilotpid: 4081922
[2024-06-21 15:56:15] 2024-06-21 13:56:14,459 [wrapper] Pilot exit status: 0
[2024-06-21 15:56:15] 2024-06-21 13:56:14,515 [wrapper] pandaids: 6238878046
[2024-06-21 15:56:15] 2024-06-21 13:56:14,673 [wrapper] cleanup supervisor_pilot 2973458 4081923
[2024-06-21 15:56:15] 2024-06-21 13:56:14,675 [wrapper] Test setup, not cleaning
[2024-06-21 15:56:15] 2024-06-21 13:56:14,677 [wrapper] ==== wrapper stdout END ====
[2024-06-21 15:56:15] 2024-06-21 13:56:14,679 [wrapper] ==== wrapper stderr END ====
[2024-06-21 15:56:15] 2024-06-21 13:56:14,712 [wrapper] apfmon messages muted
[2024-06-21 15:56:15]  *** Error codes and diagnostics ***
[2024-06-21 15:56:15]     "exeErrorCode": 0,
[2024-06-21 15:56:15]     "exeErrorDiag": "",
[2024-06-21 15:56:15]     "pilotErrorCode": 0,
[2024-06-21 15:56:15]     "pilotErrorDiag": "",
[2024-06-21 15:56:15]  *** Listing of results directory ***
[2024-06-21 15:56:15] total 872504
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 15:56:15] -rwx------ 1 boinc boinc     32308 Jun 20 17:04 runpilot2-wrapper.sh
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:04 queuedata.json
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 15:56:15] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:11 run_atlas
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:11 job.xml
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:12 start_atlas.sh
[2024-06-21 15:56:15] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:12 shared
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc    482530 Jun 21 05:12 input.tar.gz
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc      6642 Jun 21 05:12 init_data.xml
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc 539265596 Jun 21 05:12 EVNT.38776210._000690.pool.root.1
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:12 boinc_lockfile
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc      2645 Jun 21 05:12 pandaJob.out
[2024-06-21 15:56:15] -rw------- 1 boinc boinc       424 Jun 21 05:12 setup.sh.local
[2024-06-21 15:56:15] -rw------- 1 boinc boinc   1024126 Jun 21 05:12 agis_schedconf.cvmfs.json
[2024-06-21 15:56:15] -rw------- 1 boinc boinc   1321251 Jun 21 05:12 cric_ddmendpoints.json
[2024-06-21 15:56:15] drwx------ 4 boinc boinc      4096 Jun 21 05:12 pilot3
[2024-06-21 15:56:15] -rw------- 1 boinc boinc 339862154 Jun 21 15:54 HITS.38921013._050225.pool.root.1
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc       533 Jun 21 15:55 boinc_task_state.xml
[2024-06-21 15:56:15] -rw------- 1 boinc boinc      1041 Jun 21 15:55 memory_monitor_summary.json
[2024-06-21 15:56:15] -rw------- 1 boinc boinc        95 Jun 21 15:55 pilot_heartbeat.json
[2024-06-21 15:56:15] -rw------- 1 boinc boinc         0 Jun 21 15:55 agis_ddmendpoints.agis.ALL.json
[2024-06-21 15:56:15] -rw------- 1 boinc boinc    605108 Jun 21 15:55 log.38921013._050225.job.log.tgz.1
[2024-06-21 15:56:15] -rw------- 1 boinc boinc      7720 Jun 21 15:55 heartbeat.json
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc      8192 Jun 21 15:56 boinc_mmap_file
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc        29 Jun 21 15:56 wrapper_checkpoint.txt
[2024-06-21 15:56:15] -rw------- 1 boinc boinc      4417 Jun 21 15:56 pilotlog.txt
[2024-06-21 15:56:15] -rw------- 1 boinc boinc   4785916 Jun 21 15:56 log.38921013._050225.job.log.1
[2024-06-21 15:56:15] -rw------- 1 boinc boinc       357 Jun 21 15:56 output.list
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc       620 Jun 21 15:56 runtime_log
[2024-06-21 15:56:15] -rw------- 1 boinc boinc   5406720 Jun 21 15:56 result.tar.gz
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc     11410 Jun 21 15:56 runtime_log.err
[2024-06-21 15:56:15] -rw------- 1 boinc boinc       661 Jun 21 15:56 nkpLDmtVYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmWJlKDm7IyH7n.diag
[2024-06-21 15:56:15] -rw-r--r-- 1 boinc boinc     21301 Jun 21 15:56 stderr.txt
[2024-06-21 15:56:15] HITS file was successfully produced:
[2024-06-21 15:56:15] -rw------- 1 boinc boinc 339862154 Jun 21 15:54 shared/HITS.pool.root.1
[2024-06-21 15:56:15]  *** Contents of shared directory: ***
[2024-06-21 15:56:15] total 864308
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:12 start_atlas.sh
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc    482530 Jun 21 05:12 input.tar.gz
[2024-06-21 15:56:15] -rw-r--r-- 2 boinc boinc 539265596 Jun 21 05:12 ATLAS.root_0
[2024-06-21 15:56:15] -rw------- 1 boinc boinc 339862154 Jun 21 15:54 HITS.pool.root.1
[2024-06-21 15:56:15] -rw------- 1 boinc boinc   5406720 Jun 21 15:56 result.tar.gz
15:56:17 (4077280): run_atlas exited; CPU time 149366.074442
15:56:17 (4077280): called boinc_finish(0)

</stderr_txt>
]]>

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