Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:33:15 (1316343): wrapper (7.7.26015): starting
09:33:15 (1316343): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 09:33:15] Arguments: --nthreads 4
[2024-06-21 09:33:15] Threads: 4
[2024-06-21 09:33:15] Checking for CVMFS
[2024-06-21 09:33:15] No cvmfs_config command found, will try listing directly
[2024-06-21 09:33:15] CVMFS is ok
[2024-06-21 09:33:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 09:33:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 09:33:15] Further information can be found at the LHC@home message board.
[2024-06-21 09:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 09:33:15] Checking for apptainer binary...
[2024-06-21 09:33:15] which: no apptainer in ((null))
[2024-06-21 09:33:15] apptainer is not installed, using version from CVMFS
[2024-06-21 09:33:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 09:33:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-21 09:33:16] apptainer works
[2024-06-21 09:33:16] Set ATHENA_PROC_NUMBER=4
[2024-06-21 09:33:16] Set ATHENA_CORE_NUMBER=4
[2024-06-21 09:33:16] Starting ATLAS job with PandaID=6238875659
[2024-06-21 09:33:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 13:33:53]  *** The last 200 lines of the pilot log: ***
[2024-06-21 13:33:53] 2024-06-21 11:33:39,656 | INFO     | intersect: -50167482711.1987
[2024-06-21 13:33:53] 2024-06-21 11:33:39,657 | INFO     | chi2: 4.272872220329011
[2024-06-21 13:33:53] 2024-06-21 11:33:39,657 | INFO     | current chi2=4.272872220329011 (change=-0.008298418398396247 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,657 | INFO     | right removable region: 230
[2024-06-21 13:33:53] 2024-06-21 11:33:39,657 | INFO     | model: linear, x: [1718955545.0, 1718955606.0, 1718955667.0, 1718955728.0, 1718955789.0, 1718955850.0, 1718955911.0, 1718955972.0, 1718956033.0, 1718956094.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,657 | INFO     | sum of square deviations: 3822136780.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | sum of deviations: 57836084208.00001
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | mean x: 1718962560.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | mean y: 2338235.510822511
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | -- intersect: -26008783054.229958
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | intersect: -26008783054.229958
[2024-06-21 13:33:53] 2024-06-21 11:33:39,659 | INFO     | chi2: 1.674917046220363
[2024-06-21 13:33:53] 2024-06-21 11:33:39,660 | INFO     | current chi2=1.674917046220363 (change=60.797890705102674 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,660 | INFO     | model: linear, x: [1718955850.0, 1718955911.0, 1718955972.0, 1718956033.0, 1718956094.0, 1718956155.0, 1718956216.0, 1718956277.0, 1718956338.0, 1718956399.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,660 | INFO     | sum of square deviations: 3579276412.5
[2024-06-21 13:33:53] 2024-06-21 11:33:39,661 | INFO     | sum of deviations: 11717927461.499998
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | mean x: 1718962712.5
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | mean y: 2367197.163716814
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | -- intersect: -5625217278.78049
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | intersect: -5625217278.78049
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | chi2: 0.08751337767023978
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | current chi2=0.08751337767023978 (change=94.77506197290646 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,662 | INFO     | model: linear, x: [1718956155.0, 1718956216.0, 1718956277.0, 1718956338.0, 1718956399.0, 1718956460.0, 1718956521.0, 1718956582.0, 1718956643.0, 1718956704.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,663 | INFO     | sum of square deviations: 3346927870.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,664 | INFO     | sum of deviations: 3632960042.0000005
[2024-06-21 13:33:53] 2024-06-21 11:33:39,664 | INFO     | mean x: 1718962865.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,664 | INFO     | mean y: 2372452.0678733033
[2024-06-21 13:33:53] 2024-06-21 11:33:39,664 | INFO     | -- intersect: -1863494888.009235
[2024-06-21 13:33:53] 2024-06-21 11:33:39,664 | INFO     | intersect: -1863494888.009235
[2024-06-21 13:33:53] 2024-06-21 11:33:39,665 | INFO     | chi2: 0.001999278946647372
[2024-06-21 13:33:53] 2024-06-21 11:33:39,665 | INFO     | current chi2=0.001999278946647372 (change=97.71545905337938 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,665 | INFO     | model: linear, x: [1718956460.0, 1718956521.0, 1718956582.0, 1718956643.0, 1718956704.0, 1718956765.0, 1718956826.0, 1718956887.0, 1718956948.0, 1718957009.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,665 | INFO     | sum of square deviations: 3124858590.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | sum of deviations: 2567310690.4999995
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | mean x: 1718963017.5
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | mean y: 2373180.597222222
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | -- intersect: -1409886607.901523
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | intersect: -1409886607.901523
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | chi2: 0.0012976776672154091
[2024-06-21 13:33:53] 2024-06-21 11:33:39,667 | INFO     | current chi2=0.0012976776672154091 (change=35.09271583179982 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,668 | INFO     | model: linear, x: [1718956765.0, 1718956826.0, 1718956887.0, 1718956948.0, 1718957009.0, 1718957070.0, 1718957131.0, 1718957192.0, 1718957253.0, 1718957314.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,668 | INFO     | sum of square deviations: 2912836010.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,669 | INFO     | sum of deviations: 2157777095.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,669 | INFO     | mean x: 1718963170.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,669 | INFO     | mean y: 2373473.5402843603
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | -- intersect: -1271003861.3459976
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | intersect: -1271003861.3459976
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | chi2: 0.0012166353268465526
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | current chi2=0.0012166353268465526 (change=6.245182637901081 %)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | left removable region: 50
[2024-06-21 13:33:53] 2024-06-21 11:33:39,670 | INFO     | model: linear, x: [1718958290.0, 1718958351.0, 1718958412.0, 1718958473.0, 1718958534.0, 1718958595.0, 1718958656.0, 1718958717.0, 1718958778.0, 1718958839.0, 1718
[2024-06-21 13:33:53] 2024-06-21 11:33:39,671 | INFO     | sum of square deviations: 1808350185.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | sum of deviations: 2185951836.0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | mean x: 1718963749.5
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | mean y: 2372988.677777778
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | -- intersect: -2075527627.8098242
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | intersect: -2075527627.8098242
[2024-06-21 13:33:53] 2024-06-21 11:33:39,672 | INFO     | chi2: 0.00020124637368654138
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | -- intersect: -2075527627.8098242
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | current memory leak: 1.21 B/s (using 180 data points, chi2=0.00)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | ..............................
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | . Timing measurements:
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | . get job = 0 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | . initial setup = 1 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,673 | INFO     | . payload setup = 7 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,674 | INFO     | . stage-in = 0 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,674 | INFO     | . payload execution = 14371 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,674 | INFO     | . stage-out = 0 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,674 | INFO     | . log creation = 0 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,674 | INFO     | ..............................
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | 
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | job summary report
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | --------------------------------------------------
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | PanDA job id: 6238875659
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | task id: 40024049
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | errors: (none)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | pilot state: finished 
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | transexitcode: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | exeerrorcode: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,941 | INFO     | exeerrordiag: 
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | exitcode: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | exitmsg: OK
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | cpuconsumptiontime: 54106 s
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | nevents: 400
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | neventsw: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | pid: 1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | pgrp: 1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | corecount: 4
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | event service: False
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | sizes: {0: 2386862, 6: 2387068, 11: 2387096, 14382: 2417640, 14383: 2417639, 14384: 2426863, 14392: 2426977}
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | --------------------------------------------------
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | 
[2024-06-21 13:33:53] 2024-06-21 11:33:39,942 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-06-21 13:33:53] 2024-06-21 11:33:39,970 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,970 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | job 6238875659 has completed (purged errors)
[2024-06-21 13:33:53] 2024-06-21 11:33:39,972 | INFO     | overall cleanup function is called
[2024-06-21 13:33:53] 2024-06-21 11:33:40,979 | INFO     | --- collectZombieJob: --- 10, [1330276]
[2024-06-21 13:33:53] 2024-06-21 11:33:40,980 | INFO     | zombie collector waiting for pid 1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:40,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 13:33:53] 2024-06-21 11:33:41,984 | INFO     | collected zombie processes
[2024-06-21 13:33:53] 2024-06-21 11:33:41,985 | INFO     | will now attempt to kill all subprocesses of pid=1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:42,261 | INFO     | process IDs to be killed: [1330276] (in reverse order)
[2024-06-21 13:33:53] 2024-06-21 11:33:42,463 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 13:33:53] 2024-06-21 11:33:42,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 13:33:53] 2024-06-21 11:33:42,481 | INFO     | did not find any defunct processes belonging to 1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:42,490 | INFO     | did not find any defunct processes belonging to 1330276
[2024-06-21 13:33:53] 2024-06-21 11:33:42,490 | INFO     | ready for new job
[2024-06-21 13:33:53] 2024-06-21 11:33:42,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 13:33:53] 2024-06-21 11:33:42,492 | INFO     | *************************************
[2024-06-21 13:33:53] 2024-06-21 11:33:42,492 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 13:33:53] 2024-06-21 11:33:42,492 | INFO     | *************************************
[2024-06-21 13:33:53] 2024-06-21 11:33:42,492 | INFO     | 
[2024-06-21 13:33:53] 2024-06-21 11:33:42,497 | INFO     | architecture information:
[2024-06-21 13:33:53] 2024-06-21 11:33:42,497 | INFO     | executing command: cat /etc/os-release
[2024-06-21 13:33:53] 2024-06-21 11:33:42,514 | INFO     | cat /etc/os-release:
[2024-06-21 13:33:53] NAME="CentOS Linux"
[2024-06-21 13:33:53] VERSION="7 (Core)"
[2024-06-21 13:33:53] ID="centos"
[2024-06-21 13:33:53] ID_LIKE="rhel fedora"
[2024-06-21 13:33:53] VERSION_ID="7"
[2024-06-21 13:33:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 13:33:53] ANSI_COLOR="0;31"
[2024-06-21 13:33:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 13:33:53] HOME_URL="https://www.centos.org/"
[2024-06-21 13:33:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 13:33:53] 
[2024-06-21 13:33:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 13:33:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 13:33:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 13:33:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 13:33:53] 
[2024-06-21 13:33:53] 2024-06-21 11:33:42,514 | INFO     | *************************************
[2024-06-21 13:33:53] 2024-06-21 11:33:43,017 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-06-21 13:33:53] 2024-06-21 11:33:43,042 | INFO     | sufficient remaining disk space (3273100623872 B)
[2024-06-21 13:33:53] 2024-06-21 11:33:43,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 13:33:53] 2024-06-21 11:33:43,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 13:33:53] 2024-06-21 11:33:43,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 13:33:53] 2024-06-21 11:33:43,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 13:33:53] 2024-06-21 11:33:43,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 13:33:53] 2024-06-21 11:33:43,044 | INFO     | aborting loop
[2024-06-21 13:33:53] 2024-06-21 11:33:43,143 | INFO     | all data control threads have been joined
[2024-06-21 13:33:53] 2024-06-21 11:33:43,227 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 13:33:53] 2024-06-21 11:33:43,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 13:33:53] 2024-06-21 11:33:43,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 13:33:53] 2024-06-21 11:33:44,048 | INFO     | [job] retrieve thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,049 | INFO     | [job] job monitor thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,052 | INFO     | all payload control threads have been joined
[2024-06-21 13:33:53] 2024-06-21 11:33:44,056 | INFO     | [job] validate thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,148 | INFO     | [data] control thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,270 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,280 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,317 | INFO     | all job control threads have been joined
[2024-06-21 13:33:53] 2024-06-21 11:33:44,364 | INFO     | [payload] validate_post thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,377 | INFO     | [payload] failed_post thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,406 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:44,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 13:33:53] 2024-06-21 11:33:45,049 | INFO     | [data] copytool_out thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:45,057 | INFO     | [payload] control thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:45,077 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:45,320 | INFO     | [job] control thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:45,521 | INFO     | [data] copytool_in thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:45,788 | INFO     | [job] queue monitor thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:47,049 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 13:33:53] 2024-06-21 11:33:47,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47555820155968)>', '<ExcThread(monitor, started 47556004632320)>']
[2024-06-21 13:33:53] 2024-06-21 11:33:47,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 13:33:53] 2024-06-21 11:33:47,247 | INFO     | [monitor] control thread has ended
[2024-06-21 13:33:53] 2024-06-21 11:33:52,267 | INFO     | all workflow threads have been joined
[2024-06-21 13:33:53] 2024-06-21 11:33:52,267 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 13:33:53] 2024-06-21 11:33:52,267 | INFO     | traces error code: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:52,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 13:33:53] 2024-06-21 11:33:52,378 [wrapper] ==== pilot stdout END ====
[2024-06-21 13:33:53] 2024-06-21 11:33:52,380 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 13:33:53] 2024-06-21 11:33:52,382 [wrapper] pilotpid: 1321018
[2024-06-21 13:33:53] 2024-06-21 11:33:52,384 [wrapper] Pilot exit status: 0
[2024-06-21 13:33:53] 2024-06-21 11:33:52,412 [wrapper] pandaids: 6238875659
[2024-06-21 13:33:53] 2024-06-21 11:33:52,539 [wrapper] cleanup supervisor_pilot 2364299 1321019
[2024-06-21 13:33:53] 2024-06-21 11:33:52,542 [wrapper] Test setup, not cleaning
[2024-06-21 13:33:53] 2024-06-21 11:33:52,544 [wrapper] ==== wrapper stdout END ====
[2024-06-21 13:33:53] 2024-06-21 11:33:52,546 [wrapper] ==== wrapper stderr END ====
[2024-06-21 13:33:53] 2024-06-21 11:33:52,550 [wrapper] apfmon messages muted
[2024-06-21 13:33:53]  *** Error codes and diagnostics ***
[2024-06-21 13:33:53]     "exeErrorCode": 0,
[2024-06-21 13:33:53]     "exeErrorDiag": "",
[2024-06-21 13:33:53]     "pilotErrorCode": 0,
[2024-06-21 13:33:53]     "pilotErrorDiag": "",
[2024-06-21 13:33:53]  *** Listing of results directory ***
[2024-06-21 13:33:53] total 873768
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 13:33:53] -rwx------ 1 boinc boinc     32308 Jun 20 17:04 runpilot2-wrapper.sh
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:04 queuedata.json
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc       100 Jun 21 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 13:33:53] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 09:33 run_atlas
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc       105 Jun 21 09:33 job.xml
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc      6644 Jun 21 09:33 init_data.xml
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc 612670773 Jun 21 09:33 EVNT.40024047._000038.pool.root.1
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:33 start_atlas.sh
[2024-06-21 13:33:53] drwxrwx--x 2 boinc boinc      4096 Jun 21 09:33 shared
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc    482489 Jun 21 09:33 input.tar.gz
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc         0 Jun 21 09:33 boinc_lockfile
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc      2495 Jun 21 09:33 pandaJob.out
[2024-06-21 13:33:53] -rw------- 1 boinc boinc       424 Jun 21 09:33 setup.sh.local
[2024-06-21 13:33:53] -rw------- 1 boinc boinc   1023442 Jun 21 09:33 agis_schedconf.cvmfs.json
[2024-06-21 13:33:53] -rw------- 1 boinc boinc   1321251 Jun 21 09:33 cric_ddmendpoints.json
[2024-06-21 13:33:53] drwx------ 4 boinc boinc      4096 Jun 21 09:33 pilot3
[2024-06-21 13:33:53] -rw------- 1 boinc boinc 274973063 Jun 21 13:32 HITS.40024049._000668.pool.root.1
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc      8192 Jun 21 13:33 boinc_mmap_file
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc        28 Jun 21 13:33 wrapper_checkpoint.txt
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc       532 Jun 21 13:33 boinc_task_state.xml
[2024-06-21 13:33:53] -rw------- 1 boinc boinc        95 Jun 21 13:33 pilot_heartbeat.json
[2024-06-21 13:33:53] -rw------- 1 boinc boinc      1036 Jun 21 13:33 memory_monitor_summary.json
[2024-06-21 13:33:53] -rw------- 1 boinc boinc         0 Jun 21 13:33 agis_ddmendpoints.agis.ALL.json
[2024-06-21 13:33:53] -rw------- 1 boinc boinc    345036 Jun 21 13:33 log.40024049._000668.job.log.tgz.1
[2024-06-21 13:33:53] -rw------- 1 boinc boinc      7716 Jun 21 13:33 heartbeat.json
[2024-06-21 13:33:53] -rw------- 1 boinc boinc      4223 Jun 21 13:33 pilotlog.txt
[2024-06-21 13:33:53] -rw------- 1 boinc boinc   1433509 Jun 21 13:33 log.40024049._000668.job.log.1
[2024-06-21 13:33:53] -rw------- 1 boinc boinc       357 Jun 21 13:33 output.list
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc       620 Jun 21 13:33 runtime_log
[2024-06-21 13:33:53] -rw------- 1 boinc boinc   1802240 Jun 21 13:33 result.tar.gz
[2024-06-21 13:33:53] -rw------- 1 boinc boinc       657 Jun 21 13:33 wuVMDmtVYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmoJlKDmLysBUo.diag
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc     11429 Jun 21 13:33 runtime_log.err
[2024-06-21 13:33:53] -rw-r--r-- 1 boinc boinc     21331 Jun 21 13:33 stderr.txt
[2024-06-21 13:33:53] HITS file was successfully produced:
[2024-06-21 13:33:53] -rw------- 1 boinc boinc 274973063 Jun 21 13:32 shared/HITS.pool.root.1
[2024-06-21 13:33:53]  *** Contents of shared directory: ***
[2024-06-21 13:33:53] total 869104
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc 612670773 Jun 21 09:33 ATLAS.root_0
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:33 start_atlas.sh
[2024-06-21 13:33:53] -rw-r--r-- 2 boinc boinc    482489 Jun 21 09:33 input.tar.gz
[2024-06-21 13:33:53] -rw------- 1 boinc boinc 274973063 Jun 21 13:32 HITS.pool.root.1
[2024-06-21 13:33:53] -rw------- 1 boinc boinc   1802240 Jun 21 13:33 result.tar.gz
13:33:54 (1316343): run_atlas exited; CPU time 53787.712915
13:33:54 (1316343): called boinc_finish(0)

</stderr_txt>
]]>

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