Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:41 (887384): wrapper (7.7.26015): starting
08:40:41 (887384): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 08:40:41] Arguments: --nthreads 4
[2024-06-21 08:40:41] Threads: 4
[2024-06-21 08:40:41] Checking for CVMFS
[2024-06-21 08:40:41] No cvmfs_config command found, will try listing directly
[2024-06-21 08:40:41] CVMFS is ok
[2024-06-21 08:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 08:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 08:40:41] Further information can be found at the LHC@home message board.
[2024-06-21 08:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 08:40:41] Checking for apptainer binary...
[2024-06-21 08:40:41] which: no apptainer in ((null))
[2024-06-21 08:40:41] apptainer is not installed, using version from CVMFS
[2024-06-21 08:40:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 08:40:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-21 08:40:43] apptainer works
[2024-06-21 08:40:43] Set ATHENA_PROC_NUMBER=4
[2024-06-21 08:40:43] Set ATHENA_CORE_NUMBER=4
[2024-06-21 08:40:43] Starting ATLAS job with PandaID=6238875809
[2024-06-21 08:40:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 12:33:53]  *** The last 200 lines of the pilot log: ***
[2024-06-21 12:33:54] 2024-06-21 10:33:37,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 12:33:54] 2024-06-21 10:33:37,189 | INFO     | fitting pss+swap vs Time
[2024-06-21 12:33:54] 2024-06-21 10:33:37,190 | INFO     | model: linear, x: [1718952143.0, 1718952204.0, 1718952265.0, 1718952326.0, 1718952387.0, 1718952448.0, 1718952509.0, 1718952570.0, 1718952631.0, 1718952692.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,190 | INFO     | sum of square deviations: 3675146117.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | sum of deviations: 78278751297.99998
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | mean x: 1718959066.5
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | mean y: 2304834.2719298247
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | -- intersect: -36610652848.02959
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | intersect: -36610652848.02959
[2024-06-21 12:33:54] 2024-06-21 10:33:37,192 | INFO     | chi2: 4.58944275871898
[2024-06-21 12:33:54] 2024-06-21 10:33:37,193 | INFO     | model: linear, x: [1718952143.0, 1718952204.0, 1718952265.0, 1718952326.0, 1718952387.0, 1718952448.0, 1718952509.0, 1718952570.0, 1718952631.0, 1718952692.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,193 | INFO     | sum of square deviations: 3438620752.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,194 | INFO     | sum of deviations: 90401546647.99998
[2024-06-21 12:33:54] 2024-06-21 10:33:37,194 | INFO     | mean x: 1718958914.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | mean y: 2312487.8340807175
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | -- intersect: -45189220879.02044
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | intersect: -45189220879.02044
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | chi2: 3.850647047387261
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | current chi2=3.850647047387261 (change=16.09772144838634 %)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | right removable region: 222
[2024-06-21 12:33:54] 2024-06-21 10:33:37,195 | INFO     | model: linear, x: [1718952448.0, 1718952509.0, 1718952570.0, 1718952631.0, 1718952692.0, 1718952753.0, 1718952814.0, 1718952875.0, 1718952936.0, 1718952997.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,196 | INFO     | sum of square deviations: 3438620752.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,197 | INFO     | sum of deviations: 25955411062.000004
[2024-06-21 12:33:54] 2024-06-21 10:33:37,197 | INFO     | mean x: 1718959219.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,197 | INFO     | mean y: 2338459.340807175
[2024-06-21 12:33:54] 2024-06-21 10:33:37,197 | INFO     | -- intersect: -12972716466.972128
[2024-06-21 12:33:54] 2024-06-21 10:33:37,198 | INFO     | intersect: -12972716466.972128
[2024-06-21 12:33:54] 2024-06-21 10:33:37,198 | INFO     | chi2: 2.139376098317952
[2024-06-21 12:33:54] 2024-06-21 10:33:37,198 | INFO     | current chi2=2.139376098317952 (change=53.3848397116712 %)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,198 | INFO     | model: linear, x: [1718952753.0, 1718952814.0, 1718952875.0, 1718952936.0, 1718952997.0, 1718953058.0, 1718953119.0, 1718953180.0, 1718953241.0, 1718953302.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,198 | INFO     | sum of square deviations: 3212467674.5
[2024-06-21 12:33:54] 2024-06-21 10:33:37,200 | INFO     | sum of deviations: -10268306442.500002
[2024-06-21 12:33:54] 2024-06-21 10:33:37,200 | INFO     | mean x: 1718959371.5
[2024-06-21 12:33:54] 2024-06-21 10:33:37,200 | INFO     | mean y: 2362887.5458715595
[2024-06-21 12:33:54] 2024-06-21 10:33:37,200 | INFO     | -- intersect: 5496831121.071814
[2024-06-21 12:33:54] 2024-06-21 10:33:37,200 | INFO     | intersect: 5496831121.071814
[2024-06-21 12:33:54] 2024-06-21 10:33:37,201 | INFO     | chi2: 1.0718922508018303
[2024-06-21 12:33:54] 2024-06-21 10:33:37,201 | INFO     | current chi2=1.0718922508018303 (change=49.89696988553872 %)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,201 | INFO     | model: linear, x: [1718953058.0, 1718953119.0, 1718953180.0, 1718953241.0, 1718953302.0, 1718953363.0, 1718953424.0, 1718953485.0, 1718953546.0, 1718953607.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,201 | INFO     | sum of square deviations: 2996454322.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | sum of deviations: -19263285892.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | mean x: 1718959524.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | mean y: 2369111.117370892
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | -- intersect: 11053032725.26748
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | intersect: 11053032725.26748
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | chi2: 0.8272594126564073
[2024-06-21 12:33:54] 2024-06-21 10:33:37,203 | INFO     | current chi2=0.8272594126564073 (change=22.822521383322346 %)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,204 | INFO     | left removable region: 30
[2024-06-21 12:33:54] 2024-06-21 10:33:37,204 | INFO     | model: linear, x: [1718953973.0, 1718954034.0, 1718954095.0, 1718954156.0, 1718954217.0, 1718954278.0, 1718954339.0, 1718954400.0, 1718954461.0, 1718954522.0, 1718
[2024-06-21 12:33:54] 2024-06-21 10:33:37,204 | INFO     | sum of square deviations: 2194675568.0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,205 | INFO     | sum of deviations: 5420858543.5
[2024-06-21 12:33:54] 2024-06-21 10:33:37,205 | INFO     | mean x: 1718959798.5
[2024-06-21 12:33:54] 2024-06-21 10:33:37,205 | INFO     | mean y: 2369727.703125
[2024-06-21 12:33:54] 2024-06-21 10:33:37,205 | INFO     | -- intersect: -4243468721.2679186
[2024-06-21 12:33:54] 2024-06-21 10:33:37,206 | INFO     | intersect: -4243468721.2679186
[2024-06-21 12:33:54] 2024-06-21 10:33:37,206 | INFO     | chi2: 0.0053400022219632255
[2024-06-21 12:33:54] 2024-06-21 10:33:37,206 | INFO     | -- intersect: -4243468721.2679186
[2024-06-21 12:33:54] 2024-06-21 10:33:37,206 | INFO     | current memory leak: 2.47 B/s (using 192 data points, chi2=0.01)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | ..............................
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . Timing measurements:
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . get job = 0 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . initial setup = 1 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . payload setup = 20 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . stage-in = 0 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . payload execution = 13866 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . stage-out = 1 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | . log creation = 0 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,207 | INFO     | ..............................
[2024-06-21 12:33:54] 2024-06-21 10:33:37,565 | INFO     | 
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | job summary report
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | --------------------------------------------------
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | PanDA job id: 6238875809
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | task id: 40024049
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | errors: (none)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | pilot state: finished 
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | transexitcode: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | exeerrorcode: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | exeerrordiag: 
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | exitcode: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | exitmsg: OK
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | cpuconsumptiontime: 51915 s
[2024-06-21 12:33:54] 2024-06-21 10:33:37,566 | INFO     | nevents: 400
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | neventsw: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | pid: 905102
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | pgrp: 905102
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | corecount: 4
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | event service: False
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | sizes: {0: 2386699, 1: 2386898, 11: 2386898, 14: 2387132, 22: 2387160, 13890: 2417462, 13892: 2426502, 13905: 2426616}
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | --------------------------------------------------
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | 
[2024-06-21 12:33:54] 2024-06-21 10:33:37,567 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 12:33:54] 2024-06-21 10:33:37,596 | INFO     | job 6238875809 has completed (purged errors)
[2024-06-21 12:33:54] 2024-06-21 10:33:37,597 | INFO     | overall cleanup function is called
[2024-06-21 12:33:54] 2024-06-21 10:33:38,603 | INFO     | --- collectZombieJob: --- 10, [905102]
[2024-06-21 12:33:54] 2024-06-21 10:33:38,604 | INFO     | zombie collector waiting for pid 905102
[2024-06-21 12:33:54] 2024-06-21 10:33:38,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 12:33:54] 2024-06-21 10:33:39,608 | INFO     | collected zombie processes
[2024-06-21 12:33:54] 2024-06-21 10:33:39,608 | INFO     | will now attempt to kill all subprocesses of pid=905102
[2024-06-21 12:33:54] 2024-06-21 10:33:39,903 | INFO     | process IDs to be killed: [905102] (in reverse order)
[2024-06-21 12:33:54] 2024-06-21 10:33:40,221 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 12:33:54] 2024-06-21 10:33:40,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 12:33:54] 2024-06-21 10:33:40,241 | INFO     | did not find any defunct processes belonging to 905102
[2024-06-21 12:33:54] 2024-06-21 10:33:40,255 | INFO     | did not find any defunct processes belonging to 905102
[2024-06-21 12:33:54] 2024-06-21 10:33:40,255 | INFO     | ready for new job
[2024-06-21 12:33:54] 2024-06-21 10:33:40,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 12:33:54] 2024-06-21 10:33:40,258 | INFO     | *************************************
[2024-06-21 12:33:54] 2024-06-21 10:33:40,258 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 12:33:54] 2024-06-21 10:33:40,258 | INFO     | *************************************
[2024-06-21 12:33:54] 2024-06-21 10:33:40,258 | INFO     | 
[2024-06-21 12:33:54] 2024-06-21 10:33:40,265 | INFO     | architecture information:
[2024-06-21 12:33:54] 2024-06-21 10:33:40,265 | INFO     | executing command: cat /etc/os-release
[2024-06-21 12:33:54] 2024-06-21 10:33:40,284 | INFO     | cat /etc/os-release:
[2024-06-21 12:33:54] NAME="CentOS Linux"
[2024-06-21 12:33:54] VERSION="7 (Core)"
[2024-06-21 12:33:54] ID="centos"
[2024-06-21 12:33:54] ID_LIKE="rhel fedora"
[2024-06-21 12:33:54] VERSION_ID="7"
[2024-06-21 12:33:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 12:33:54] ANSI_COLOR="0;31"
[2024-06-21 12:33:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 12:33:54] HOME_URL="https://www.centos.org/"
[2024-06-21 12:33:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 12:33:54] 
[2024-06-21 12:33:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 12:33:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 12:33:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 12:33:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 12:33:54] 
[2024-06-21 12:33:54] 2024-06-21 10:33:40,285 | INFO     | *************************************
[2024-06-21 12:33:54] 2024-06-21 10:33:40,787 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-21 12:33:54] 2024-06-21 10:33:40,810 | INFO     | sufficient remaining disk space (3175669039104 B)
[2024-06-21 12:33:54] 2024-06-21 10:33:40,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 12:33:54] 2024-06-21 10:33:40,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 12:33:54] 2024-06-21 10:33:41,035 | INFO     | all data control threads have been joined
[2024-06-21 12:33:54] 2024-06-21 10:33:41,109 | INFO     | all payload control threads have been joined
[2024-06-21 12:33:54] 2024-06-21 10:33:41,124 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 12:33:54] 2024-06-21 10:33:41,125 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 12:33:54] 2024-06-21 10:33:41,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 12:33:54] 2024-06-21 10:33:41,125 | INFO     | will abort loop
[2024-06-21 12:33:54] 2024-06-21 10:33:41,315 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 12:33:54] 2024-06-21 10:33:41,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 12:33:54] 2024-06-21 10:33:41,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 12:33:54] 2024-06-21 10:33:41,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 12:33:54] 2024-06-21 10:33:41,815 | INFO     | [job] retrieve thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:41,831 | INFO     | all job control threads have been joined
[2024-06-21 12:33:54] 2024-06-21 10:33:42,040 | INFO     | [data] control thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,065 | INFO     | [data] copytool_in thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,114 | INFO     | [payload] control thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,129 | INFO     | [job] job monitor thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,171 | INFO     | [payload] failed_post thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,304 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 12:33:54] 2024-06-21 10:33:42,427 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,627 | INFO     | [payload] validate_post thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,836 | INFO     | [job] control thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:42,931 | INFO     | [job] validate thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:43,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 12:33:54] 2024-06-21 10:33:43,234 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:43,246 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:43,326 | INFO     | [job] queue monitor thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:43,597 | INFO     | [data] copytool_out thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:47,183 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 12:33:54] 2024-06-21 10:33:47,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47163967263808)>', '<ExcThread(monitor, started 47164158043904)>']
[2024-06-21 12:33:54] 2024-06-21 10:33:48,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 12:33:54] 2024-06-21 10:33:48,352 | INFO     | [monitor] control thread has ended
[2024-06-21 12:33:54] 2024-06-21 10:33:52,826 | INFO     | all workflow threads have been joined
[2024-06-21 12:33:54] 2024-06-21 10:33:52,827 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 12:33:54] 2024-06-21 10:33:52,827 | INFO     | traces error code: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:52,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 12:33:54] 2024-06-21 10:33:52,982 [wrapper] ==== pilot stdout END ====
[2024-06-21 12:33:54] 2024-06-21 10:33:52,984 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 12:33:54] 2024-06-21 10:33:52,987 [wrapper] pilotpid: 892339
[2024-06-21 12:33:54] 2024-06-21 10:33:52,990 [wrapper] Pilot exit status: 0
[2024-06-21 12:33:54] 2024-06-21 10:33:53,042 [wrapper] pandaids: 6238875809
[2024-06-21 12:33:54] 2024-06-21 10:33:53,164 [wrapper] cleanup supervisor_pilot 1996661 892340
[2024-06-21 12:33:54] 2024-06-21 10:33:53,167 [wrapper] Test setup, not cleaning
[2024-06-21 12:33:54] 2024-06-21 10:33:53,169 [wrapper] ==== wrapper stdout END ====
[2024-06-21 12:33:54] 2024-06-21 10:33:53,172 [wrapper] ==== wrapper stderr END ====
[2024-06-21 12:33:54] 2024-06-21 10:33:53,176 [wrapper] apfmon messages muted
[2024-06-21 12:33:54]  *** Error codes and diagnostics ***
[2024-06-21 12:33:54]     "exeErrorCode": 0,
[2024-06-21 12:33:54]     "exeErrorDiag": "",
[2024-06-21 12:33:54]     "pilotErrorCode": 0,
[2024-06-21 12:33:54]     "pilotErrorDiag": "",
[2024-06-21 12:33:54]  *** Listing of results directory ***
[2024-06-21 12:33:54] total 871316
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 12:33:54] -rwx------ 1 boinc boinc     32308 Jun 20 17:04 runpilot2-wrapper.sh
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:04 queuedata.json
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc       100 Jun 21 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 12:33:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 08:40 run_atlas
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc       105 Jun 21 08:40 job.xml
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 08:40 start_atlas.sh
[2024-06-21 12:33:54] drwxrwx--x 2 boinc boinc      4096 Jun 21 08:40 shared
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc    482482 Jun 21 08:40 input.tar.gz
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc      6644 Jun 21 08:40 init_data.xml
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc 614662130 Jun 21 08:40 EVNT.40024047._000041.pool.root.1
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc         0 Jun 21 08:40 boinc_lockfile
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc      2503 Jun 21 08:40 pandaJob.out
[2024-06-21 12:33:54] -rw------- 1 boinc boinc       424 Jun 21 08:40 setup.sh.local
[2024-06-21 12:33:54] -rw------- 1 boinc boinc   1023400 Jun 21 08:41 agis_schedconf.cvmfs.json
[2024-06-21 12:33:54] -rw------- 1 boinc boinc   1321251 Jun 21 08:41 cric_ddmendpoints.json
[2024-06-21 12:33:54] drwx------ 4 boinc boinc      4096 Jun 21 08:41 pilot3
[2024-06-21 12:33:54] -rw------- 1 boinc boinc 270490204 Jun 21 12:32 HITS.40024049._000740.pool.root.1
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc       532 Jun 21 12:32 boinc_task_state.xml
[2024-06-21 12:33:54] -rw------- 1 boinc boinc        95 Jun 21 12:33 pilot_heartbeat.json
[2024-06-21 12:33:54] -rw------- 1 boinc boinc      1039 Jun 21 12:33 memory_monitor_summary.json
[2024-06-21 12:33:54] -rw------- 1 boinc boinc         0 Jun 21 12:33 agis_ddmendpoints.agis.ALL.json
[2024-06-21 12:33:54] -rw------- 1 boinc boinc    342010 Jun 21 12:33 log.40024049._000740.job.log.tgz.1
[2024-06-21 12:33:54] -rw------- 1 boinc boinc      7713 Jun 21 12:33 heartbeat.json
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc      8192 Jun 21 12:33 boinc_mmap_file
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc        28 Jun 21 12:33 wrapper_checkpoint.txt
[2024-06-21 12:33:54] -rw------- 1 boinc boinc      4409 Jun 21 12:33 pilotlog.txt
[2024-06-21 12:33:54] -rw------- 1 boinc boinc   1426958 Jun 21 12:33 log.40024049._000740.job.log.1
[2024-06-21 12:33:54] -rw------- 1 boinc boinc       357 Jun 21 12:33 output.list
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc       620 Jun 21 12:33 runtime_log
[2024-06-21 12:33:54] -rw------- 1 boinc boinc   1792000 Jun 21 12:33 result.tar.gz
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc     11429 Jun 21 12:33 runtime_log.err
[2024-06-21 12:33:54] -rw------- 1 boinc boinc       659 Jun 21 12:33 kubNDmtVYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmEKlKDm7vFmln.diag
[2024-06-21 12:33:54] -rw-r--r-- 1 boinc boinc     21303 Jun 21 12:33 stderr.txt
[2024-06-21 12:33:54] HITS file was successfully produced:
[2024-06-21 12:33:54] -rw------- 1 boinc boinc 270490204 Jun 21 12:32 shared/HITS.pool.root.1
[2024-06-21 12:33:54]  *** Contents of shared directory: ***
[2024-06-21 12:33:54] total 866660
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc     17537 Jun 21 08:40 start_atlas.sh
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc    482482 Jun 21 08:40 input.tar.gz
[2024-06-21 12:33:54] -rw-r--r-- 2 boinc boinc 614662130 Jun 21 08:40 ATLAS.root_0
[2024-06-21 12:33:54] -rw------- 1 boinc boinc 270490204 Jun 21 12:32 HITS.pool.root.1
[2024-06-21 12:33:54] -rw------- 1 boinc boinc   1792000 Jun 21 12:33 result.tar.gz
12:33:55 (887384): run_atlas exited; CPU time 51629.852856
12:33:55 (887384): called boinc_finish(0)

</stderr_txt>
]]>

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