Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:04 (657630): wrapper (7.7.26015): starting
17:30:04 (657630): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 17:30:04] Arguments: --nthreads 4
[2024-06-20 17:30:04] Threads: 4
[2024-06-20 17:30:04] Checking for CVMFS
[2024-06-20 17:30:04] No cvmfs_config command found, will try listing directly
[2024-06-20 17:30:04] CVMFS is ok
[2024-06-20 17:30:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 17:30:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 17:30:04] Further information can be found at the LHC@home message board.
[2024-06-20 17:30:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 17:30:04] Checking for apptainer binary...
[2024-06-20 17:30:04] which: no apptainer in ((null))
[2024-06-20 17:30:04] apptainer is not installed, using version from CVMFS
[2024-06-20 17:30:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 17:30:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-20 17:30:05] apptainer works
[2024-06-20 17:30:05] Set ATHENA_PROC_NUMBER=4
[2024-06-20 17:30:05] Set ATHENA_CORE_NUMBER=4
[2024-06-20 17:30:05] Starting ATLAS job with PandaID=6238875479
[2024-06-20 17:30:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 21:33:33]  *** The last 200 lines of the pilot log: ***
[2024-06-20 21:33:34] 2024-06-20 19:33:16,884 | WARNING  | GPU info not found in prmon json
[2024-06-20 21:33:34] 2024-06-20 19:33:16,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 21:33:34] 2024-06-20 19:33:16,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 21:33:34] 2024-06-20 19:33:16,889 | INFO     | fitting pss+swap vs Time
[2024-06-20 21:33:34] 2024-06-20 19:33:16,889 | INFO     | model: linear, x: [1718897440.0, 1718897501.0, 1718897562.0, 1718897623.0, 1718897684.0, 1718897745.0, 1718897806.0, 1718897867.0, 1718897928.0, 1718897989.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,890 | INFO     | sum of square deviations: 4233158440.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,891 | INFO     | sum of deviations: 102041425860.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,891 | INFO     | mean x: 1718904699.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,891 | INFO     | mean y: 2295748.6945606694
[2024-06-20 21:33:34] 2024-06-20 19:33:16,892 | INFO     | -- intersect: -41432365601.569984
[2024-06-20 21:33:34] 2024-06-20 19:33:16,892 | INFO     | intersect: -41432365601.569984
[2024-06-20 21:33:34] 2024-06-20 19:33:16,892 | INFO     | chi2: 5.119429235237432
[2024-06-20 21:33:34] 2024-06-20 19:33:16,892 | INFO     | model: linear, x: [1718897440.0, 1718897501.0, 1718897562.0, 1718897623.0, 1718897684.0, 1718897745.0, 1718897806.0, 1718897867.0, 1718897928.0, 1718897989.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,892 | INFO     | sum of square deviations: 3972995422.5
[2024-06-20 21:33:34] 2024-06-20 19:33:16,894 | INFO     | sum of deviations: 115319373726.50002
[2024-06-20 21:33:34] 2024-06-20 19:33:16,894 | INFO     | mean x: 1718904546.5
[2024-06-20 21:33:34] 2024-06-20 19:33:16,894 | INFO     | mean y: 2303373.277777778
[2024-06-20 21:33:34] 2024-06-20 19:33:16,894 | INFO     | -- intersect: -49890277593.574196
[2024-06-20 21:33:34] 2024-06-20 19:33:16,894 | INFO     | intersect: -49890277593.574196
[2024-06-20 21:33:34] 2024-06-20 19:33:16,895 | INFO     | chi2: 4.273149328911192
[2024-06-20 21:33:34] 2024-06-20 19:33:16,895 | INFO     | current chi2=4.273149328911192 (change=16.530747226687495 %)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,895 | INFO     | right removable region: 233
[2024-06-20 21:33:34] 2024-06-20 19:33:16,895 | INFO     | model: linear, x: [1718897745.0, 1718897806.0, 1718897867.0, 1718897928.0, 1718897989.0, 1718898050.0, 1718898111.0, 1718898172.0, 1718898233.0, 1718898294.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,895 | INFO     | sum of square deviations: 3972995422.5
[2024-06-20 21:33:34] 2024-06-20 19:33:16,896 | INFO     | sum of deviations: 44852137340.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | mean x: 1718904851.5
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | mean y: 2329198.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | -- intersect: -19402816863.14432
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | intersect: -19402816863.14432
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | chi2: 2.528419633261001
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | current chi2=2.528419633261001 (change=50.61129830923943 %)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | model: linear, x: [1718898050.0, 1718898111.0, 1718898172.0, 1718898233.0, 1718898294.0, 1718898355.0, 1718898416.0, 1718898477.0, 1718898538.0, 1718898599.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,897 | INFO     | sum of square deviations: 3723716330.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | sum of deviations: -1980165652.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | mean x: 1718905004.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | mean y: 2357850.6593886465
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | -- intersect: 916422281.5479045
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | intersect: 916422281.5479045
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | chi2: 0.9346949799234894
[2024-06-20 21:33:34] 2024-06-20 19:33:16,898 | INFO     | current chi2=0.9346949799234894 (change=63.03244257291354 %)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,899 | INFO     | model: linear, x: [1718898355.0, 1718898416.0, 1718898477.0, 1718898538.0, 1718898599.0, 1718898660.0, 1718898721.0, 1718898782.0, 1718898843.0, 1718898904.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,899 | INFO     | sum of square deviations: 3485088600.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,899 | INFO     | sum of deviations: -7538833474.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | mean x: 1718905156.5
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | mean y: 2361362.7321428573
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | -- intersect: 3720642651.8946075
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | intersect: 3720642651.8946075
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | chi2: 0.8902731826086099
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | current chi2=0.8902731826086099 (change=4.752544762625739 %)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | left removable region: 30
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | model: linear, x: [1718899270.0, 1718899331.0, 1718899392.0, 1718899453.0, 1718899514.0, 1718899575.0, 1718899636.0, 1718899697.0, 1718899758.0, 1718899819.0, 1718
[2024-06-20 21:33:34] 2024-06-20 19:33:16,900 | INFO     | sum of square deviations: 2593916542.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | sum of deviations: 4952005803.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | mean x: 1718905431.0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | mean y: 2372501.231527094
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | -- intersect: -3279163173.2189484
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | intersect: -3279163173.2189484
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | chi2: 0.00034342322700974
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | -- intersect: -3279163173.2189484
[2024-06-20 21:33:34] 2024-06-20 19:33:16,901 | INFO     | current memory leak: 1.91 B/s (using 203 data points, chi2=0.00)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | ..............................
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . Timing measurements:
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . get job = 0 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . initial setup = 1 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . payload setup = 5 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . stage-in = 0 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . payload execution = 14550 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . stage-out = 1 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | . log creation = 0 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,902 | INFO     | ..............................
[2024-06-20 21:33:34] 2024-06-20 19:33:16,963 | INFO     | 
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | job summary report
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | --------------------------------------------------
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | PanDA job id: 6238875479
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | task id: 40024049
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | errors: (none)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | pilot state: finished 
[2024-06-20 21:33:34] 2024-06-20 19:33:16,964 | INFO     | transexitcode: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | exeerrorcode: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | exeerrordiag: 
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | exitcode: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | exitmsg: OK
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | cpuconsumptiontime: 54980 s
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | nevents: 400
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | neventsw: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | pid: 769364
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | pgrp: 769364
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | corecount: 4
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | event service: False
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | sizes: {0: 2385345, 1: 2386893, 5: 2387099, 12: 2387155, 14559: 2417809, 14561: 2426793, 14562: 2426977, 14567: 2427147}
[2024-06-20 21:33:34] 2024-06-20 19:33:16,965 | INFO     | --------------------------------------------------
[2024-06-20 21:33:34] 2024-06-20 19:33:16,966 | INFO     | 
[2024-06-20 21:33:34] 2024-06-20 19:33:16,966 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,990 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 21:33:34] 2024-06-20 19:33:16,991 | INFO     | job 6238875479 has completed (purged errors)
[2024-06-20 21:33:34] 2024-06-20 19:33:16,991 | INFO     | overall cleanup function is called
[2024-06-20 21:33:34] 2024-06-20 19:33:17,998 | INFO     | --- collectZombieJob: --- 10, [769364]
[2024-06-20 21:33:34] 2024-06-20 19:33:17,999 | INFO     | zombie collector waiting for pid 769364
[2024-06-20 21:33:34] 2024-06-20 19:33:17,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 21:33:34] 2024-06-20 19:33:19,004 | INFO     | collected zombie processes
[2024-06-20 21:33:34] 2024-06-20 19:33:19,004 | INFO     | will now attempt to kill all subprocesses of pid=769364
[2024-06-20 21:33:34] 2024-06-20 19:33:19,223 | INFO     | process IDs to be killed: [769364] (in reverse order)
[2024-06-20 21:33:34] 2024-06-20 19:33:19,378 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 21:33:34] 2024-06-20 19:33:19,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 21:33:34] 2024-06-20 19:33:19,399 | INFO     | did not find any defunct processes belonging to 769364
[2024-06-20 21:33:34] 2024-06-20 19:33:19,414 | INFO     | did not find any defunct processes belonging to 769364
[2024-06-20 21:33:34] 2024-06-20 19:33:19,414 | INFO     | ready for new job
[2024-06-20 21:33:34] 2024-06-20 19:33:19,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 21:33:34] 2024-06-20 19:33:19,417 | INFO     | *************************************
[2024-06-20 21:33:34] 2024-06-20 19:33:19,417 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 21:33:34] 2024-06-20 19:33:19,417 | INFO     | *************************************
[2024-06-20 21:33:34] 2024-06-20 19:33:19,417 | INFO     | 
[2024-06-20 21:33:34] 2024-06-20 19:33:19,426 | INFO     | architecture information:
[2024-06-20 21:33:34] 2024-06-20 19:33:19,426 | INFO     | executing command: cat /etc/os-release
[2024-06-20 21:33:34] 2024-06-20 19:33:19,441 | INFO     | cat /etc/os-release:
[2024-06-20 21:33:34] NAME="CentOS Linux"
[2024-06-20 21:33:34] VERSION="7 (Core)"
[2024-06-20 21:33:34] ID="centos"
[2024-06-20 21:33:34] ID_LIKE="rhel fedora"
[2024-06-20 21:33:34] VERSION_ID="7"
[2024-06-20 21:33:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 21:33:34] ANSI_COLOR="0;31"
[2024-06-20 21:33:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 21:33:34] HOME_URL="https://www.centos.org/"
[2024-06-20 21:33:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 21:33:34] 
[2024-06-20 21:33:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 21:33:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 21:33:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 21:33:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 21:33:34] 
[2024-06-20 21:33:34] 2024-06-20 19:33:19,441 | INFO     | *************************************
[2024-06-20 21:33:34] 2024-06-20 19:33:19,943 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-20 21:33:34] 2024-06-20 19:33:19,963 | INFO     | sufficient remaining disk space (3166352441344 B)
[2024-06-20 21:33:34] 2024-06-20 19:33:19,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 21:33:34] 2024-06-20 19:33:19,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 21:33:34] 2024-06-20 19:33:20,046 | INFO     | all data control threads have been joined
[2024-06-20 21:33:34] 2024-06-20 19:33:20,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 21:33:34] 2024-06-20 19:33:20,370 | INFO     | aborting loop
[2024-06-20 21:33:34] 2024-06-20 19:33:20,450 | INFO     | all job control threads have been joined
[2024-06-20 21:33:34] 2024-06-20 19:33:20,478 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 21:33:34] 2024-06-20 19:33:20,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 21:33:34] 2024-06-20 19:33:20,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 21:33:34] 2024-06-20 19:33:20,483 | INFO     | all payload control threads have been joined
[2024-06-20 21:33:34] 2024-06-20 19:33:20,970 | INFO     | [job] retrieve thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,052 | INFO     | [data] control thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 21:33:34] 2024-06-20 19:33:21,276 | INFO     | [payload] validate_post thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,374 | INFO     | [job] job monitor thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,455 | INFO     | [job] validate thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,455 | INFO     | [job] control thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,488 | INFO     | [payload] control thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,555 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,705 | INFO     | [data] copytool_in thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:21,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 21:33:34] 2024-06-20 19:33:22,002 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:22,023 | INFO     | [payload] failed_post thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:22,227 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:22,425 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:22,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 21:33:34] 2024-06-20 19:33:22,978 | INFO     | [job] queue monitor thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:23,116 | INFO     | [data] copytool_out thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:26,521 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 21:33:34] 2024-06-20 19:33:28,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46950446396480)>', '<ExcThread(monitor, started 46950632974080)>']
[2024-06-20 21:33:34] 2024-06-20 19:33:28,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 21:33:34] 2024-06-20 19:33:28,511 | INFO     | [monitor] control thread has ended
[2024-06-20 21:33:34] 2024-06-20 19:33:33,047 | INFO     | all workflow threads have been joined
[2024-06-20 21:33:34] 2024-06-20 19:33:33,047 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 21:33:34] 2024-06-20 19:33:33,048 | INFO     | traces error code: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:33,048 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 21:33:34] 2024-06-20 19:33:33,159 [wrapper] ==== pilot stdout END ====
[2024-06-20 21:33:34] 2024-06-20 19:33:33,161 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 21:33:34] 2024-06-20 19:33:33,162 [wrapper] pilotpid: 677598
[2024-06-20 21:33:34] 2024-06-20 19:33:33,164 [wrapper] Pilot exit status: 0
[2024-06-20 21:33:34] 2024-06-20 19:33:33,180 [wrapper] pandaids: 6238875479
[2024-06-20 21:33:34] 2024-06-20 19:33:33,259 [wrapper] cleanup supervisor_pilot 1932362 677599
[2024-06-20 21:33:34] 2024-06-20 19:33:33,261 [wrapper] Test setup, not cleaning
[2024-06-20 21:33:34] 2024-06-20 19:33:33,263 [wrapper] ==== wrapper stdout END ====
[2024-06-20 21:33:34] 2024-06-20 19:33:33,264 [wrapper] ==== wrapper stderr END ====
[2024-06-20 21:33:34] 2024-06-20 19:33:33,268 [wrapper] apfmon messages muted
[2024-06-20 21:33:34]  *** Error codes and diagnostics ***
[2024-06-20 21:33:34]     "exeErrorCode": 0,
[2024-06-20 21:33:34]     "exeErrorDiag": "",
[2024-06-20 21:33:34]     "pilotErrorCode": 0,
[2024-06-20 21:33:34]     "pilotErrorDiag": "",
[2024-06-20 21:33:34]  *** Listing of results directory ***
[2024-06-20 21:33:34] total 885928
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-20 21:33:34] -rwx------ 1 boinc boinc     32308 Jun 20 17:01 runpilot2-wrapper.sh
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:02 queuedata.json
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 21:33:34] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:28 run_atlas
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:28 job.xml
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc      6644 Jun 20 17:30 init_data.xml
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc 615358465 Jun 20 17:30 EVNT.40024047._000031.pool.root.1
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:30 start_atlas.sh
[2024-06-20 21:33:34] drwxrwx--x 2 boinc boinc      4096 Jun 20 17:30 shared
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc    482478 Jun 20 17:30 input.tar.gz
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc         0 Jun 20 17:30 boinc_lockfile
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc      2495 Jun 20 17:30 pandaJob.out
[2024-06-20 21:33:34] -rw------- 1 boinc boinc       424 Jun 20 17:30 setup.sh.local
[2024-06-20 21:33:34] -rw------- 1 boinc boinc   1015545 Jun 20 17:30 agis_schedconf.cvmfs.json
[2024-06-20 21:33:34] -rw------- 1 boinc boinc   1321254 Jun 20 17:30 cric_ddmendpoints.json
[2024-06-20 21:33:34] drwx------ 4 boinc boinc      4096 Jun 20 17:30 pilot3
[2024-06-20 21:33:34] -rw------- 1 boinc boinc 284635744 Jun 20 21:32 HITS.40024049._000491.pool.root.1
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc       532 Jun 20 21:32 boinc_task_state.xml
[2024-06-20 21:33:34] -rw------- 1 boinc boinc      1036 Jun 20 21:33 memory_monitor_summary.json
[2024-06-20 21:33:34] -rw------- 1 boinc boinc        95 Jun 20 21:33 pilot_heartbeat.json
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc      8192 Jun 20 21:33 boinc_mmap_file
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc        28 Jun 20 21:33 wrapper_checkpoint.txt
[2024-06-20 21:33:34] -rw------- 1 boinc boinc         0 Jun 20 21:33 agis_ddmendpoints.agis.ALL.json
[2024-06-20 21:33:34] -rw------- 1 boinc boinc    350514 Jun 20 21:33 log.40024049._000491.job.log.tgz.1
[2024-06-20 21:33:34] -rw------- 1 boinc boinc      7708 Jun 20 21:33 heartbeat.json
[2024-06-20 21:33:34] -rw------- 1 boinc boinc      4223 Jun 20 21:33 pilotlog.txt
[2024-06-20 21:33:34] -rw------- 1 boinc boinc   1479901 Jun 20 21:33 log.40024049._000491.job.log.1
[2024-06-20 21:33:34] -rw------- 1 boinc boinc       357 Jun 20 21:33 output.list
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc       620 Jun 20 21:33 runtime_log
[2024-06-20 21:33:34] -rw------- 1 boinc boinc   1853440 Jun 20 21:33 result.tar.gz
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc     11429 Jun 20 21:33 runtime_log.err
[2024-06-20 21:33:34] -rw------- 1 boinc boinc       657 Jun 20 21:33 fTDLDmpSYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmZoqKDmDRHhOo.diag
[2024-06-20 21:33:34] -rw-r--r-- 1 boinc boinc     21252 Jun 20 21:33 stderr.txt
[2024-06-20 21:33:34] HITS file was successfully produced:
[2024-06-20 21:33:34] -rw------- 1 boinc boinc 284635744 Jun 20 21:32 shared/HITS.pool.root.1
[2024-06-20 21:33:34]  *** Contents of shared directory: ***
[2024-06-20 21:33:34] total 881220
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc 615358465 Jun 20 17:30 ATLAS.root_0
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:30 start_atlas.sh
[2024-06-20 21:33:34] -rw-r--r-- 2 boinc boinc    482478 Jun 20 17:30 input.tar.gz
[2024-06-20 21:33:34] -rw------- 1 boinc boinc 284635744 Jun 20 21:32 HITS.pool.root.1
[2024-06-20 21:33:34] -rw------- 1 boinc boinc   1853440 Jun 20 21:33 result.tar.gz
21:33:35 (657630): run_atlas exited; CPU time 54670.736150
21:33:35 (657630): called boinc_finish(0)

</stderr_txt>
]]>

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