Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:03 (498166): wrapper (7.7.26015): starting
06:51:03 (498166): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 06:51:03] Arguments: --nthreads 4
[2024-06-21 06:51:03] Threads: 4
[2024-06-21 06:51:03] Checking for CVMFS
[2024-06-21 06:51:03] No cvmfs_config command found, will try listing directly
[2024-06-21 06:51:03] CVMFS is ok
[2024-06-21 06:51:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 06:51:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 06:51:03] Further information can be found at the LHC@home message board.
[2024-06-21 06:51:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 06:51:03] Checking for apptainer binary...
[2024-06-21 06:51:03] which: no apptainer in ((null))
[2024-06-21 06:51:03] apptainer is not installed, using version from CVMFS
[2024-06-21 06:51:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 06:51:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-21 06:51:04] apptainer works
[2024-06-21 06:51:04] Set ATHENA_PROC_NUMBER=4
[2024-06-21 06:51:04] Set ATHENA_CORE_NUMBER=4
[2024-06-21 06:51:04] Starting ATLAS job with PandaID=6238873726
[2024-06-21 06:51:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 10:52:04]  *** The last 200 lines of the pilot log: ***
[2024-06-21 10:52:04] 2024-06-21 08:51:41,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 10:52:04] 2024-06-21 08:51:41,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 10:52:04] 2024-06-21 08:51:41,133 | INFO     | fitting pss+swap vs Time
[2024-06-21 10:52:04] 2024-06-21 08:51:41,133 | INFO     | model: linear, x: [1718945530.0, 1718945591.0, 1718945652.0, 1718945713.0, 1718945774.0, 1718945835.0, 1718945896.0, 1718945957.0, 1718946018.0, 1718946079.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,133 | INFO     | sum of square deviations: 4075741535.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | sum of deviations: 91629016616.49998
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | mean x: 1718952697.5
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | mean y: 2294100.5466101696
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | -- intersect: -38642439361.97531
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | intersect: -38642439361.97531
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | chi2: 4.7732025024226346
[2024-06-21 10:52:04] 2024-06-21 08:51:41,135 | INFO     | model: linear, x: [1718945530.0, 1718945591.0, 1718945652.0, 1718945713.0, 1718945774.0, 1718945835.0, 1718945896.0, 1718945957.0, 1718946018.0, 1718946079.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,136 | INFO     | sum of square deviations: 3822136780.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | sum of deviations: 104481879822.00002
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | mean x: 1718952545.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | mean y: 2301673.16017316
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | -- intersect: -46986962072.23909
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | intersect: -46986962072.23909
[2024-06-21 10:52:04] 2024-06-21 08:51:41,137 | INFO     | chi2: 3.981620444634846
[2024-06-21 10:52:04] 2024-06-21 08:51:41,138 | INFO     | current chi2=3.981620444634846 (change=16.58387754104339 %)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,138 | INFO     | right removable region: 230
[2024-06-21 10:52:04] 2024-06-21 08:51:41,138 | INFO     | model: linear, x: [1718945835.0, 1718945896.0, 1718945957.0, 1718946018.0, 1718946079.0, 1718946140.0, 1718946201.0, 1718946262.0, 1718946323.0, 1718946384.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,138 | INFO     | sum of square deviations: 3822136780.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,139 | INFO     | sum of deviations: 36370294740.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,139 | INFO     | mean x: 1718952850.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | mean y: 2327245.619047619
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | -- intersect: -16354706894.499563
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | intersect: -16354706894.499563
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | chi2: 2.2716391939562017
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | current chi2=2.2716391939562017 (change=52.408489000765556 %)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | model: linear, x: [1718946140.0, 1718946201.0, 1718946262.0, 1718946323.0, 1718946384.0, 1718946445.0, 1718946506.0, 1718946567.0, 1718946628.0, 1718946689.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,140 | INFO     | sum of square deviations: 3579276412.5
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | sum of deviations: -6251068208.000009
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | mean x: 1718953002.5
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | mean y: 2354010.6371681415
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | -- intersect: 3004439132.4924808
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | intersect: 3004439132.4924808
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | chi2: 0.908759865375172
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | current chi2=0.908759865375172 (change=59.99541354133313 %)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,142 | INFO     | model: linear, x: [1718946445.0, 1718946506.0, 1718946567.0, 1718946628.0, 1718946689.0, 1718946750.0, 1718946811.0, 1718946872.0, 1718946933.0, 1718946994.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,143 | INFO     | sum of square deviations: 3346927870.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | sum of deviations: -13021516218.999998
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | mean x: 1718953155.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | mean y: 2358400.696832579
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | -- intersect: 6690096307.499621
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | intersect: 6690096307.499621
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | chi2: 0.8373512398923556
[2024-06-21 10:52:04] 2024-06-21 08:51:41,144 | INFO     | current chi2=0.8373512398923556 (change=7.8578102096681 %)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,145 | INFO     | left removable region: 30
[2024-06-21 10:52:04] 2024-06-21 08:51:41,145 | INFO     | model: linear, x: [1718947360.0, 1718947421.0, 1718947482.0, 1718947543.0, 1718947604.0, 1718947665.0, 1718947726.0, 1718947787.0, 1718947848.0, 1718947909.0, 1718
[2024-06-21 10:52:04] 2024-06-21 08:51:41,145 | INFO     | sum of square deviations: 2480604650.0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | sum of deviations: 3669926621.5000005
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | mean x: 1718953429.5
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | mean y: 2366163.505
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | -- intersect: -2540736765.8718247
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | intersect: -2540736765.8718247
[2024-06-21 10:52:04] 2024-06-21 08:51:41,146 | INFO     | chi2: 0.00042206598249084476
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | -- intersect: -2540736765.8718247
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | current memory leak: 1.48 B/s (using 200 data points, chi2=0.00)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | ..............................
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . Timing measurements:
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . get job = 0 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . initial setup = 1 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . payload setup = 13 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . stage-in = 0 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . payload execution = 14365 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . stage-out = 1 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,147 | INFO     | . log creation = 0 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,148 | INFO     | ..............................
[2024-06-21 10:52:04] 2024-06-21 08:51:41,266 | INFO     | 
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | job summary report
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | --------------------------------------------------
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | PanDA job id: 6238873726
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | task id: 40024049
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | errors: (none)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | pilot state: finished 
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | transexitcode: 0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | exeerrorcode: 0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | exeerrordiag: 
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | exitcode: 0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | exitmsg: OK
[2024-06-21 10:52:04] 2024-06-21 08:51:41,267 | INFO     | cpuconsumptiontime: 53975 s
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | nevents: 400
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | neventsw: 0
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | pid: 510877
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | pgrp: 510877
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | corecount: 4
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | event service: False
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | sizes: {0: 2386698, 1: 2386897, 11: 2387131, 14382: 2417528, 14383: 2426510, 14384: 2426566, 14393: 2426864}
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | --------------------------------------------------
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | 
[2024-06-21 10:52:04] 2024-06-21 08:51:41,268 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/1
[2024-06-21 10:52:04] 2024-06-21 08:51:41,298 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,298 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,298 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,300 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,300 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 10:52:04] 2024-06-21 08:51:41,300 | INFO     | job 6238873726 has completed (purged errors)
[2024-06-21 10:52:04] 2024-06-21 08:51:41,300 | INFO     | overall cleanup function is called
[2024-06-21 10:52:04] 2024-06-21 08:51:42,307 | INFO     | --- collectZombieJob: --- 10, [510877]
[2024-06-21 10:52:04] 2024-06-21 08:51:42,308 | INFO     | zombie collector waiting for pid 510877
[2024-06-21 10:52:04] 2024-06-21 08:51:42,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 10:52:04] 2024-06-21 08:51:43,312 | INFO     | collected zombie processes
[2024-06-21 10:52:04] 2024-06-21 08:51:43,313 | INFO     | will now attempt to kill all subprocesses of pid=510877
[2024-06-21 10:52:04] 2024-06-21 08:51:43,591 | INFO     | process IDs to be killed: [510877] (in reverse order)
[2024-06-21 10:52:04] 2024-06-21 08:51:43,794 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 10:52:04] 2024-06-21 08:51:43,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 10:52:04] 2024-06-21 08:51:43,813 | INFO     | did not find any defunct processes belonging to 510877
[2024-06-21 10:52:04] 2024-06-21 08:51:43,826 | INFO     | did not find any defunct processes belonging to 510877
[2024-06-21 10:52:04] 2024-06-21 08:51:43,826 | INFO     | ready for new job
[2024-06-21 10:52:04] 2024-06-21 08:51:43,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 10:52:04] 2024-06-21 08:51:43,828 | INFO     | *************************************
[2024-06-21 10:52:04] 2024-06-21 08:51:43,828 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 10:52:04] 2024-06-21 08:51:43,828 | INFO     | *************************************
[2024-06-21 10:52:04] 2024-06-21 08:51:43,828 | INFO     | 
[2024-06-21 10:52:04] 2024-06-21 08:51:43,835 | INFO     | architecture information:
[2024-06-21 10:52:04] 2024-06-21 08:51:43,835 | INFO     | executing command: cat /etc/os-release
[2024-06-21 10:52:04] 2024-06-21 08:51:43,857 | INFO     | cat /etc/os-release:
[2024-06-21 10:52:04] NAME="CentOS Linux"
[2024-06-21 10:52:04] VERSION="7 (Core)"
[2024-06-21 10:52:04] ID="centos"
[2024-06-21 10:52:04] ID_LIKE="rhel fedora"
[2024-06-21 10:52:04] VERSION_ID="7"
[2024-06-21 10:52:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 10:52:04] ANSI_COLOR="0;31"
[2024-06-21 10:52:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 10:52:04] HOME_URL="https://www.centos.org/"
[2024-06-21 10:52:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 10:52:04] 
[2024-06-21 10:52:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 10:52:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 10:52:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 10:52:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 10:52:04] 
[2024-06-21 10:52:04] 2024-06-21 08:51:43,858 | INFO     | *************************************
[2024-06-21 10:52:04] 2024-06-21 08:51:44,361 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/1
[2024-06-21 10:52:04] 2024-06-21 08:51:44,384 | INFO     | sufficient remaining disk space (3148673449984 B)
[2024-06-21 10:52:04] 2024-06-21 08:51:44,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 10:52:04] 2024-06-21 08:51:44,385 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 10:52:04] 2024-06-21 08:51:44,565 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 10:52:04] 2024-06-21 08:51:44,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 10:52:04] 2024-06-21 08:51:44,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 10:52:04] 2024-06-21 08:51:44,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 10:52:04] 2024-06-21 08:51:44,787 | INFO     | all data control threads have been joined
[2024-06-21 10:52:04] 2024-06-21 08:51:44,788 | INFO     | all payload control threads have been joined
[2024-06-21 10:52:04] 2024-06-21 08:51:44,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:52:04] 2024-06-21 08:51:44,963 | INFO     | aborting loop
[2024-06-21 10:52:04] 2024-06-21 08:51:45,209 | INFO     | all job control threads have been joined
[2024-06-21 10:52:04] 2024-06-21 08:51:45,390 | INFO     | [job] retrieve thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,697 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,740 | INFO     | [payload] validate_post thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,760 | INFO     | [payload] failed_post thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,793 | INFO     | [data] control thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,794 | INFO     | [payload] control thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:45,968 | INFO     | [job] job monitor thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,215 | INFO     | [job] control thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,225 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:52:04] 2024-06-21 08:51:46,245 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,341 | INFO     | [data] copytool_in thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,434 | INFO     | [job] validate thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,593 | INFO     | [data] copytool_out thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:46,910 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 10:52:04] 2024-06-21 08:51:47,243 | INFO     | [job] queue monitor thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:50,915 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:54,886 | INFO     | job.realtimelogging is not enabled
[2024-06-21 10:52:04] 2024-06-21 08:51:55,891 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 10:52:04] 2024-06-21 08:51:57,890 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47524559443008)>', '<ExcThread(monitor, started 47524741818112)>']
[2024-06-21 10:52:04] 2024-06-21 08:51:58,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 10:52:04] 2024-06-21 08:51:58,632 | INFO     | [monitor] control thread has ended
[2024-06-21 10:52:04] 2024-06-21 08:52:02,915 | INFO     | all workflow threads have been joined
[2024-06-21 10:52:04] 2024-06-21 08:52:02,916 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 10:52:04] 2024-06-21 08:52:02,916 | INFO     | traces error code: 0
[2024-06-21 10:52:04] 2024-06-21 08:52:02,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 10:52:04] 2024-06-21 08:52:03,035 [wrapper] ==== pilot stdout END ====
[2024-06-21 10:52:04] 2024-06-21 08:52:03,038 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 10:52:04] 2024-06-21 08:52:03,040 [wrapper] pilotpid: 502899
[2024-06-21 10:52:04] 2024-06-21 08:52:03,042 [wrapper] Pilot exit status: 0
[2024-06-21 10:52:04] 2024-06-21 08:52:03,084 [wrapper] pandaids: 6238873726
[2024-06-21 10:52:04] 2024-06-21 08:52:03,207 [wrapper] cleanup supervisor_pilot 1641796 502900
[2024-06-21 10:52:04] 2024-06-21 08:52:03,209 [wrapper] Test setup, not cleaning
[2024-06-21 10:52:04] 2024-06-21 08:52:03,213 [wrapper] ==== wrapper stdout END ====
[2024-06-21 10:52:04] 2024-06-21 08:52:03,219 [wrapper] ==== wrapper stderr END ====
[2024-06-21 10:52:04] 2024-06-21 08:52:03,229 [wrapper] apfmon messages muted
[2024-06-21 10:52:04]  *** Error codes and diagnostics ***
[2024-06-21 10:52:04]     "exeErrorCode": 0,
[2024-06-21 10:52:04]     "exeErrorDiag": "",
[2024-06-21 10:52:04]     "pilotErrorCode": 0,
[2024-06-21 10:52:04]     "pilotErrorDiag": "",
[2024-06-21 10:52:04]  *** Listing of results directory ***
[2024-06-21 10:52:04] total 874860
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:00 queuedata.json
[2024-06-21 10:52:04] -rwx------ 1 boinc boinc     32308 Jun 20 17:01 runpilot2-wrapper.sh
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc       100 Jun 21 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 10:52:04] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 06:50 run_atlas
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc       105 Jun 21 06:50 job.xml
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc     17537 Jun 21 06:51 start_atlas.sh
[2024-06-21 10:52:04] drwxrwx--x 2 boinc boinc      4096 Jun 21 06:51 shared
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc    482476 Jun 21 06:51 input.tar.gz
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc      6642 Jun 21 06:51 init_data.xml
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc 612613282 Jun 21 06:51 EVNT.40024047._000027.pool.root.1
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc         0 Jun 21 06:51 boinc_lockfile
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc      2503 Jun 21 06:51 pandaJob.out
[2024-06-21 10:52:04] -rw------- 1 boinc boinc       424 Jun 21 06:51 setup.sh.local
[2024-06-21 10:52:04] -rw------- 1 boinc boinc   1024123 Jun 21 06:51 agis_schedconf.cvmfs.json
[2024-06-21 10:52:04] -rw------- 1 boinc boinc   1321251 Jun 21 06:51 cric_ddmendpoints.json
[2024-06-21 10:52:04] drwx------ 4 boinc boinc      4096 Jun 21 06:51 pilot3
[2024-06-21 10:52:04] -rw------- 1 boinc boinc 276063317 Jun 21 10:50 HITS.40024049._000424.pool.root.1
[2024-06-21 10:52:04] -rw------- 1 boinc boinc        95 Jun 21 10:51 pilot_heartbeat.json
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc       531 Jun 21 10:51 boinc_task_state.xml
[2024-06-21 10:52:04] -rw------- 1 boinc boinc      1034 Jun 21 10:51 memory_monitor_summary.json
[2024-06-21 10:52:04] -rw------- 1 boinc boinc         0 Jun 21 10:51 agis_ddmendpoints.agis.ALL.json
[2024-06-21 10:52:04] -rw------- 1 boinc boinc    356133 Jun 21 10:51 log.40024049._000424.job.log.tgz.1
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc      8192 Jun 21 10:51 boinc_mmap_file
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc        28 Jun 21 10:51 wrapper_checkpoint.txt
[2024-06-21 10:52:04] -rw------- 1 boinc boinc      7706 Jun 21 10:51 heartbeat.json
[2024-06-21 10:52:04] -rw------- 1 boinc boinc      4294 Jun 21 10:52 pilotlog.txt
[2024-06-21 10:52:04] -rw------- 1 boinc boinc   1463548 Jun 21 10:52 log.40024049._000424.job.log.1
[2024-06-21 10:52:04] -rw------- 1 boinc boinc       357 Jun 21 10:52 output.list
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc       620 Jun 21 10:52 runtime_log
[2024-06-21 10:52:04] -rw------- 1 boinc boinc   1843200 Jun 21 10:52 result.tar.gz
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc     11410 Jun 21 10:52 runtime_log.err
[2024-06-21 10:52:04] -rw------- 1 boinc boinc       657 Jun 21 10:52 oiBODmnSYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDm4nqKDmuJbCLn.diag
[2024-06-21 10:52:04] -rw-r--r-- 1 boinc boinc     21259 Jun 21 10:52 stderr.txt
[2024-06-21 10:52:04] HITS file was successfully produced:
[2024-06-21 10:52:04] -rw------- 1 boinc boinc 276063317 Jun 21 10:50 shared/HITS.pool.root.1
[2024-06-21 10:52:04]  *** Contents of shared directory: ***
[2024-06-21 10:52:04] total 870152
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc     17537 Jun 21 06:51 start_atlas.sh
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc    482476 Jun 21 06:51 input.tar.gz
[2024-06-21 10:52:04] -rw-r--r-- 2 boinc boinc 612613282 Jun 21 06:51 ATLAS.root_0
[2024-06-21 10:52:04] -rw------- 1 boinc boinc 276063317 Jun 21 10:50 HITS.pool.root.1
[2024-06-21 10:52:04] -rw------- 1 boinc boinc   1843200 Jun 21 10:52 result.tar.gz
10:52:05 (498166): run_atlas exited; CPU time 53662.213328
10:52:05 (498166): called boinc_finish(0)

</stderr_txt>
]]>

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