Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:12:00 (2230072): wrapper (7.7.26015): starting
22:12:00 (2230072): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 22:12:00] Arguments: --nthreads 4
[2024-06-20 22:12:00] Threads: 4
[2024-06-20 22:12:00] Checking for CVMFS
[2024-06-20 22:12:00] No cvmfs_config command found, will try listing directly
[2024-06-20 22:12:00] CVMFS is ok
[2024-06-20 22:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 22:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 22:12:00] Further information can be found at the LHC@home message board.
[2024-06-20 22:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 22:12:00] Checking for apptainer binary...
[2024-06-20 22:12:00] which: no apptainer in ((null))
[2024-06-20 22:12:00] apptainer is not installed, using version from CVMFS
[2024-06-20 22:12:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 22:12:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-20 22:12:01] apptainer works
[2024-06-20 22:12:01] Set ATHENA_PROC_NUMBER=4
[2024-06-20 22:12:01] Set ATHENA_CORE_NUMBER=4
[2024-06-20 22:12:01] Starting ATLAS job with PandaID=6238875608
[2024-06-20 22:12:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 02:11:41]  *** The last 200 lines of the pilot log: ***
[2024-06-21 02:11:41] 2024-06-21 00:11:18,694 | INFO     | right removable region: 228
[2024-06-21 02:11:41] 2024-06-21 00:11:18,695 | INFO     | model: linear, x: [1718914692.0, 1718914753.0, 1718914814.0, 1718914875.0, 1718914936.0, 1718914997.0, 1718915058.0, 1718915119.0, 1718915180.0, 1718915241.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,695 | INFO     | sum of square deviations: 3723716330.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,696 | INFO     | sum of deviations: 57770371531.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,696 | INFO     | mean x: 1718921646.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,696 | INFO     | mean y: 2340945.021834061
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | -- intersect: -26665303236.69758
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | intersect: -26665303236.69758
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | chi2: 1.6793134418689974
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | current chi2=1.6793134418689974 (change=61.459295118946415 %)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | model: linear, x: [1718914997.0, 1718915058.0, 1718915119.0, 1718915180.0, 1718915241.0, 1718915302.0, 1718915363.0, 1718915424.0, 1718915485.0, 1718915546.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,697 | INFO     | sum of square deviations: 3485088600.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,699 | INFO     | sum of deviations: 12010383147.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,699 | INFO     | mean x: 1718921798.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,699 | INFO     | mean y: 2370192.0803571427
[2024-06-21 02:11:41] 2024-06-21 00:11:18,699 | INFO     | -- intersect: -5921413036.7636175
[2024-06-21 02:11:41] 2024-06-21 00:11:18,699 | INFO     | intersect: -5921413036.7636175
[2024-06-21 02:11:41] 2024-06-21 00:11:18,700 | INFO     | chi2: 0.09283699813132132
[2024-06-21 02:11:41] 2024-06-21 00:11:18,700 | INFO     | current chi2=0.09283699813132132 (change=94.47172899253411 %)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,700 | INFO     | model: linear, x: [1718915302.0, 1718915363.0, 1718915424.0, 1718915485.0, 1718915546.0, 1718915607.0, 1718915668.0, 1718915729.0, 1718915790.0, 1718915851.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,700 | INFO     | sum of square deviations: 3256879670.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,701 | INFO     | sum of deviations: 3707743723.9999995
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | mean x: 1718921951.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | mean y: 2375682.4657534244
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | -- intersect: -1954504129.3898947
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | intersect: -1954504129.3898947
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | chi2: 0.0017566015166663412
[2024-06-21 02:11:41] 2024-06-21 00:11:18,702 | INFO     | current chi2=0.0017566015166663412 (change=98.10786480387748 %)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,703 | INFO     | model: linear, x: [1718915607.0, 1718915668.0, 1718915729.0, 1718915790.0, 1718915851.0, 1718915912.0, 1718915973.0, 1718916034.0, 1718916095.0, 1718916156.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,703 | INFO     | sum of square deviations: 3038856977.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,704 | INFO     | sum of deviations: 2746989667.500001
[2024-06-21 02:11:41] 2024-06-21 00:11:18,704 | INFO     | mean x: 1718922103.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,704 | INFO     | mean y: 2376352.995327103
[2024-06-21 02:11:41] 2024-06-21 00:11:18,704 | INFO     | -- intersect: -1551451712.1334364
[2024-06-21 02:11:41] 2024-06-21 00:11:18,705 | INFO     | intersect: -1551451712.1334364
[2024-06-21 02:11:41] 2024-06-21 00:11:18,705 | INFO     | chi2: 0.0012849232228922302
[2024-06-21 02:11:41] 2024-06-21 00:11:18,705 | INFO     | current chi2=0.0012849232228922302 (change=26.851752619982754 %)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,705 | INFO     | model: linear, x: [1718915912.0, 1718915973.0, 1718916034.0, 1718916095.0, 1718916156.0, 1718916217.0, 1718916278.0, 1718916339.0, 1718916400.0, 1718916461.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,705 | INFO     | sum of square deviations: 2830787960.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | sum of deviations: 2208673787.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | mean x: 1718922256.0
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | mean y: 2376745.5406698566
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | -- intersect: -1338782882.9318573
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | intersect: -1338782882.9318573
[2024-06-21 02:11:41] 2024-06-21 00:11:18,707 | INFO     | chi2: 0.0011295140477617996
[2024-06-21 02:11:41] 2024-06-21 00:11:18,708 | INFO     | current chi2=0.0011295140477617996 (change=12.094821882090393 %)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,708 | INFO     | left removable region: 50
[2024-06-21 02:11:41] 2024-06-21 00:11:18,708 | INFO     | model: linear, x: [1718917437.0, 1718917498.0, 1718917559.0, 1718917620.0, 1718917681.0, 1718917742.0, 1718917803.0, 1718917864.0, 1718917925.0, 1718917986.0, 1718
[2024-06-21 02:11:41] 2024-06-21 00:11:18,708 | INFO     | sum of square deviations: 1748737904.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,709 | INFO     | sum of deviations: 2570458412.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,709 | INFO     | mean x: 1718922835.5
[2024-06-21 02:11:41] 2024-06-21 00:11:18,709 | INFO     | mean y: 2376044.342696629
[2024-06-21 02:11:41] 2024-06-21 00:11:18,709 | INFO     | -- intersect: -2524257393.1664224
[2024-06-21 02:11:41] 2024-06-21 00:11:18,709 | INFO     | intersect: -2524257393.1664224
[2024-06-21 02:11:41] 2024-06-21 00:11:18,710 | INFO     | chi2: 0.0005027068729163253
[2024-06-21 02:11:41] 2024-06-21 00:11:18,710 | INFO     | -- intersect: -2524257393.1664224
[2024-06-21 02:11:41] 2024-06-21 00:11:18,710 | INFO     | current memory leak: 1.47 B/s (using 178 data points, chi2=0.00)
[2024-06-21 02:11:41] 2024-06-21 00:11:18,710 | INFO     | ..............................
[2024-06-21 02:11:41] 2024-06-21 00:11:18,710 | INFO     | . Timing measurements:
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . get job = 0 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . initial setup = 1 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . payload setup = 13 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . stage-in = 0 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . payload execution = 14283 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . stage-out = 1 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | . log creation = 0 s
[2024-06-21 02:11:41] 2024-06-21 00:11:18,711 | INFO     | ..............................
[2024-06-21 02:11:41] 2024-06-21 00:11:19,122 | INFO     | 
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | job summary report
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | --------------------------------------------------
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | PanDA job id: 6238875608
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | task id: 40024049
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | errors: (none)
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | pilot state: finished 
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | transexitcode: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | exeerrorcode: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | exeerrordiag: 
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | exitcode: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | exitmsg: OK
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | cpuconsumptiontime: 53881 s
[2024-06-21 02:11:41] 2024-06-21 00:11:19,123 | INFO     | nevents: 400
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | neventsw: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | pid: 2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | pgrp: 2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | corecount: 4
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | event service: False
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | sizes: {0: 2386690, 1: 2386889, 10: 2387095, 11: 2387123, 14299: 2417521, 14301: 2426503, 14304: 2426687, 14315: 2426857}
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | --------------------------------------------------
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | 
[2024-06-21 02:11:41] 2024-06-21 00:11:19,124 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/1
[2024-06-21 02:11:41] 2024-06-21 00:11:19,151 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,151 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,151 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | job 6238875608 has completed (purged errors)
[2024-06-21 02:11:41] 2024-06-21 00:11:19,153 | INFO     | overall cleanup function is called
[2024-06-21 02:11:41] 2024-06-21 00:11:20,160 | INFO     | --- collectZombieJob: --- 10, [2244799]
[2024-06-21 02:11:41] 2024-06-21 00:11:20,161 | INFO     | zombie collector waiting for pid 2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:20,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 02:11:41] 2024-06-21 00:11:21,165 | INFO     | collected zombie processes
[2024-06-21 02:11:41] 2024-06-21 00:11:21,166 | INFO     | will now attempt to kill all subprocesses of pid=2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:21,443 | INFO     | process IDs to be killed: [2244799] (in reverse order)
[2024-06-21 02:11:41] 2024-06-21 00:11:21,645 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 02:11:41] 2024-06-21 00:11:21,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 02:11:41] 2024-06-21 00:11:21,665 | INFO     | did not find any defunct processes belonging to 2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:21,678 | INFO     | did not find any defunct processes belonging to 2244799
[2024-06-21 02:11:41] 2024-06-21 00:11:21,679 | INFO     | ready for new job
[2024-06-21 02:11:41] 2024-06-21 00:11:21,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 02:11:41] 2024-06-21 00:11:21,681 | INFO     | *************************************
[2024-06-21 02:11:41] 2024-06-21 00:11:21,681 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 02:11:41] 2024-06-21 00:11:21,681 | INFO     | *************************************
[2024-06-21 02:11:41] 2024-06-21 00:11:21,681 | INFO     | 
[2024-06-21 02:11:41] 2024-06-21 00:11:21,689 | INFO     | architecture information:
[2024-06-21 02:11:41] 2024-06-21 00:11:21,689 | INFO     | executing command: cat /etc/os-release
[2024-06-21 02:11:41] 2024-06-21 00:11:21,713 | INFO     | cat /etc/os-release:
[2024-06-21 02:11:41] NAME="CentOS Linux"
[2024-06-21 02:11:41] VERSION="7 (Core)"
[2024-06-21 02:11:41] ID="centos"
[2024-06-21 02:11:41] ID_LIKE="rhel fedora"
[2024-06-21 02:11:41] VERSION_ID="7"
[2024-06-21 02:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 02:11:41] ANSI_COLOR="0;31"
[2024-06-21 02:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 02:11:41] HOME_URL="https://www.centos.org/"
[2024-06-21 02:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 02:11:41] 
[2024-06-21 02:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 02:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 02:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 02:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 02:11:41] 
[2024-06-21 02:11:41] 2024-06-21 00:11:21,714 | INFO     | *************************************
[2024-06-21 02:11:41] 2024-06-21 00:11:22,217 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/1
[2024-06-21 02:11:41] 2024-06-21 00:11:22,239 | INFO     | sufficient remaining disk space (3146434740224 B)
[2024-06-21 02:11:41] 2024-06-21 00:11:22,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 02:11:41] 2024-06-21 00:11:22,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 02:11:41] 2024-06-21 00:11:22,293 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 02:11:41] 2024-06-21 00:11:22,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 02:11:41] 2024-06-21 00:11:22,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 02:11:41] 2024-06-21 00:11:22,305 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 02:11:41] 2024-06-21 00:11:22,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 02:11:41] 2024-06-21 00:11:22,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:11:41] 2024-06-21 00:11:22,306 | INFO     | will abort loop
[2024-06-21 02:11:41] 2024-06-21 00:11:22,364 | INFO     | all job control threads have been joined
[2024-06-21 02:11:41] 2024-06-21 00:11:22,612 | INFO     | all payload control threads have been joined
[2024-06-21 02:11:41] 2024-06-21 00:11:22,758 | INFO     | all data control threads have been joined
[2024-06-21 02:11:41] 2024-06-21 00:11:22,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 02:11:41] 2024-06-21 00:11:23,245 | INFO     | [job] retrieve thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 02:11:41] 2024-06-21 00:11:23,311 | INFO     | [job] job monitor thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,370 | INFO     | [job] control thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,618 | INFO     | [payload] control thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,763 | INFO     | [data] control thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:11:41] 2024-06-21 00:11:23,851 | INFO     | [payload] validate_post thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:23,877 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,008 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,261 | INFO     | [job] validate thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,579 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,604 | INFO     | [data] copytool_in thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,703 | INFO     | [payload] failed_post thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:24,808 | INFO     | [job] queue monitor thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:25,310 | INFO     | [data] copytool_out thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:26,901 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:33,156 | INFO     | job.realtimelogging is not enabled
[2024-06-21 02:11:41] 2024-06-21 00:11:34,161 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 02:11:41] 2024-06-21 00:11:35,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47478133859392)>', '<ExcThread(monitor, started 47478588057344)>']
[2024-06-21 02:11:41] 2024-06-21 00:11:35,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 02:11:41] 2024-06-21 00:11:35,358 | INFO     | [monitor] control thread has ended
[2024-06-21 02:11:41] 2024-06-21 00:11:40,071 | INFO     | all workflow threads have been joined
[2024-06-21 02:11:41] 2024-06-21 00:11:40,072 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 02:11:41] 2024-06-21 00:11:40,072 | INFO     | traces error code: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:40,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 02:11:41] 2024-06-21 00:11:40,169 [wrapper] ==== pilot stdout END ====
[2024-06-21 02:11:41] 2024-06-21 00:11:40,174 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 02:11:41] 2024-06-21 00:11:40,180 [wrapper] pilotpid: 2235017
[2024-06-21 02:11:41] 2024-06-21 00:11:40,185 [wrapper] Pilot exit status: 0
[2024-06-21 02:11:41] 2024-06-21 00:11:40,222 [wrapper] pandaids: 6238875608
[2024-06-21 02:11:41] 2024-06-21 00:11:40,363 [wrapper] cleanup supervisor_pilot 3278006 2235018
[2024-06-21 02:11:41] 2024-06-21 00:11:40,366 [wrapper] Test setup, not cleaning
[2024-06-21 02:11:41] 2024-06-21 00:11:40,368 [wrapper] ==== wrapper stdout END ====
[2024-06-21 02:11:41] 2024-06-21 00:11:40,370 [wrapper] ==== wrapper stderr END ====
[2024-06-21 02:11:41] 2024-06-21 00:11:40,378 [wrapper] apfmon messages muted
[2024-06-21 02:11:41]  *** Error codes and diagnostics ***
[2024-06-21 02:11:41]     "exeErrorCode": 0,
[2024-06-21 02:11:41]     "exeErrorDiag": "",
[2024-06-21 02:11:41]     "pilotErrorCode": 0,
[2024-06-21 02:11:41]     "pilotErrorDiag": "",
[2024-06-21 02:11:41]  *** Listing of results directory ***
[2024-06-21 02:11:41] total 871640
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 02:11:41] -rwx------ 1 boinc boinc     32308 Jun 20 17:00 runpilot2-wrapper.sh
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:00 queuedata.json
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc       100 Jun 20 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 02:11:41] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 22:11 run_atlas
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc       105 Jun 20 22:11 job.xml
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:12 start_atlas.sh
[2024-06-21 02:11:41] drwxrwx--x 2 boinc boinc      4096 Jun 20 22:12 shared
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc    482481 Jun 20 22:12 input.tar.gz
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc      6642 Jun 20 22:12 init_data.xml
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc 613305643 Jun 20 22:12 EVNT.40024047._000036.pool.root.1
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc         0 Jun 20 22:12 boinc_lockfile
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc      2495 Jun 20 22:12 pandaJob.out
[2024-06-21 02:11:41] -rw------- 1 boinc boinc       424 Jun 20 22:12 setup.sh.local
[2024-06-21 02:11:41] -rw------- 1 boinc boinc   1024128 Jun 20 22:12 agis_schedconf.cvmfs.json
[2024-06-21 02:11:41] -rw------- 1 boinc boinc   1321251 Jun 20 22:12 cric_ddmendpoints.json
[2024-06-21 02:11:41] drwx------ 4 boinc boinc      4096 Jun 20 22:12 pilot3
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc       532 Jun 21 02:10 boinc_task_state.xml
[2024-06-21 02:11:41] -rw------- 1 boinc boinc 272166939 Jun 21 02:10 HITS.40024049._000618.pool.root.1
[2024-06-21 02:11:41] -rw------- 1 boinc boinc      1041 Jun 21 02:11 memory_monitor_summary.json
[2024-06-21 02:11:41] -rw------- 1 boinc boinc         0 Jun 21 02:11 agis_ddmendpoints.agis.ALL.json
[2024-06-21 02:11:41] -rw------- 1 boinc boinc    347230 Jun 21 02:11 log.40024049._000618.job.log.tgz.1
[2024-06-21 02:11:41] -rw------- 1 boinc boinc        95 Jun 21 02:11 pilot_heartbeat.json
[2024-06-21 02:11:41] -rw------- 1 boinc boinc      7716 Jun 21 02:11 heartbeat.json
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc      8192 Jun 21 02:11 boinc_mmap_file
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc        28 Jun 21 02:11 wrapper_checkpoint.txt
[2024-06-21 02:11:41] -rw------- 1 boinc boinc      4480 Jun 21 02:11 pilotlog.txt
[2024-06-21 02:11:41] -rw------- 1 boinc boinc   1428367 Jun 21 02:11 log.40024049._000618.job.log.1
[2024-06-21 02:11:41] -rw------- 1 boinc boinc       357 Jun 21 02:11 output.list
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc       620 Jun 21 02:11 runtime_log
[2024-06-21 02:11:41] -rw------- 1 boinc boinc   1792000 Jun 21 02:11 result.tar.gz
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc     11410 Jun 21 02:11 runtime_log.err
[2024-06-21 02:11:41] -rw------- 1 boinc boinc       658 Jun 21 02:11 27LODmnRYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmHlKDmGtzYzn.diag
[2024-06-21 02:11:41] -rw-r--r-- 1 boinc boinc     21373 Jun 21 02:11 stderr.txt
[2024-06-21 02:11:41] HITS file was successfully produced:
[2024-06-21 02:11:41] -rw------- 1 boinc boinc 272166939 Jun 21 02:10 shared/HITS.pool.root.1
[2024-06-21 02:11:41]  *** Contents of shared directory: ***
[2024-06-21 02:11:41] total 866976
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:12 start_atlas.sh
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc    482481 Jun 20 22:12 input.tar.gz
[2024-06-21 02:11:41] -rw-r--r-- 2 boinc boinc 613305643 Jun 20 22:12 ATLAS.root_0
[2024-06-21 02:11:41] -rw------- 1 boinc boinc 272166939 Jun 21 02:10 HITS.pool.root.1
[2024-06-21 02:11:41] -rw------- 1 boinc boinc   1792000 Jun 21 02:11 result.tar.gz
02:11:42 (2230072): run_atlas exited; CPU time 53581.548926
02:11:42 (2230072): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN