Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:36 (2096944): wrapper (7.7.26015): starting
12:53:36 (2096944): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 12:53:36] Arguments: --nthreads 4
[2024-06-21 12:53:36] Threads: 4
[2024-06-21 12:53:36] Checking for CVMFS
[2024-06-21 12:53:36] No cvmfs_config command found, will try listing directly
[2024-06-21 12:53:36] CVMFS is ok
[2024-06-21 12:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 12:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 12:53:36] Further information can be found at the LHC@home message board.
[2024-06-21 12:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 12:53:36] Checking for apptainer binary...
[2024-06-21 12:53:36] which: no apptainer in ((null))
[2024-06-21 12:53:36] apptainer is not installed, using version from CVMFS
[2024-06-21 12:53:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 12:53:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-21 12:53:38] apptainer works
[2024-06-21 12:53:38] Set ATHENA_PROC_NUMBER=4
[2024-06-21 12:53:38] Set ATHENA_CORE_NUMBER=4
[2024-06-21 12:53:38] Starting ATLAS job with PandaID=6238873713
[2024-06-21 12:53:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:53:58]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:53:58] 2024-06-21 14:53:42,661 | INFO     | fitting pss+swap vs Time
[2024-06-21 16:53:58] 2024-06-21 14:53:42,661 | INFO     | model: linear, x: [1718967310.0, 1718967371.0, 1718967432.0, 1718967493.0, 1718967554.0, 1718967615.0, 1718967676.0, 1718967737.0, 1718967798.0, 1718967859.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,661 | INFO     | sum of square deviations: 4024149870.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,663 | INFO     | sum of deviations: 95007768034.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,663 | INFO     | mean x: 1718974447.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,663 | INFO     | mean y: 2294762.4085106384
[2024-06-21 16:53:58] 2024-06-21 14:53:42,663 | INFO     | -- intersect: -40581662295.07291
[2024-06-21 16:53:58] 2024-06-21 14:53:42,663 | INFO     | intersect: -40581662295.07291
[2024-06-21 16:53:58] 2024-06-21 14:53:42,664 | INFO     | chi2: 4.587063800539332
[2024-06-21 16:53:58] 2024-06-21 14:53:42,664 | INFO     | model: linear, x: [1718967310.0, 1718967371.0, 1718967432.0, 1718967493.0, 1718967554.0, 1718967615.0, 1718967676.0, 1718967737.0, 1718967798.0, 1718967859.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,666 | INFO     | sum of square deviations: 3772712597.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,668 | INFO     | sum of deviations: 107600064066.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,668 | INFO     | mean x: 1718974294.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,668 | INFO     | mean y: 2302242.4565217393
[2024-06-21 16:53:58] 2024-06-21 14:53:42,668 | INFO     | -- intersect: -49023892951.80029
[2024-06-21 16:53:58] 2024-06-21 14:53:42,668 | INFO     | intersect: -49023892951.80029
[2024-06-21 16:53:58] 2024-06-21 14:53:42,669 | INFO     | chi2: 3.7950192208181095
[2024-06-21 16:53:58] 2024-06-21 14:53:42,669 | INFO     | current chi2=3.7950192208181095 (change=17.266918755917384 %)
[2024-06-21 16:53:58] 2024-06-21 14:53:42,669 | INFO     | right removable region: 229
[2024-06-21 16:53:58] 2024-06-21 14:53:42,669 | INFO     | model: linear, x: [1718967615.0, 1718967676.0, 1718967737.0, 1718967798.0, 1718967859.0, 1718967920.0, 1718967981.0, 1718968042.0, 1718968103.0, 1718968164.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,669 | INFO     | sum of square deviations: 3772712597.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,671 | INFO     | sum of deviations: 41140669352.500015
[2024-06-21 16:53:58] 2024-06-21 14:53:42,671 | INFO     | mean x: 1718974599.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,671 | INFO     | mean y: 2327345.2652173913
[2024-06-21 16:53:58] 2024-06-21 14:53:42,671 | INFO     | -- intersect: -18742743686.71276
[2024-06-21 16:53:58] 2024-06-21 14:53:42,671 | INFO     | intersect: -18742743686.71276
[2024-06-21 16:53:58] 2024-06-21 14:53:42,672 | INFO     | chi2: 2.195070877328921
[2024-06-21 16:53:58] 2024-06-21 14:53:42,672 | INFO     | current chi2=2.195070877328921 (change=52.1464934263432 %)
[2024-06-21 16:53:58] 2024-06-21 14:53:42,672 | INFO     | model: linear, x: [1718967920.0, 1718967981.0, 1718968042.0, 1718968103.0, 1718968164.0, 1718968225.0, 1718968286.0, 1718968347.0, 1718968408.0, 1718968469.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,672 | INFO     | sum of square deviations: 3531973200.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | sum of deviations: -761201920.0000019
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | mean x: 1718974752.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | mean y: 2353890.6666666665
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | -- intersect: 372822976.2344527
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | intersect: 372822976.2344527
[2024-06-21 16:53:58] 2024-06-21 14:53:42,674 | INFO     | chi2: 0.8823076100904429
[2024-06-21 16:53:58] 2024-06-21 14:53:42,675 | INFO     | current chi2=0.8823076100904429 (change=59.80505143578407 %)
[2024-06-21 16:53:58] 2024-06-21 14:53:42,675 | INFO     | model: linear, x: [1718968225.0, 1718968286.0, 1718968347.0, 1718968408.0, 1718968469.0, 1718968530.0, 1718968591.0, 1718968652.0, 1718968713.0, 1718968774.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,675 | INFO     | sum of square deviations: 3301699115.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,676 | INFO     | sum of deviations: -7026833298.499999
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | mean x: 1718974904.5
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | mean y: 2357993.7045454546
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | -- intersect: 3660762250.879402
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | intersect: 3660762250.879402
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | chi2: 0.8252744518355678
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | current chi2=0.8252744518355678 (change=6.4640900296699 %)
[2024-06-21 16:53:58] 2024-06-21 14:53:42,677 | INFO     | left removable region: 30
[2024-06-21 16:53:58] 2024-06-21 14:53:42,678 | INFO     | model: linear, x: [1718969140.0, 1718969201.0, 1718969262.0, 1718969323.0, 1718969384.0, 1718969445.0, 1718969506.0, 1718969567.0, 1718969628.0, 1718969689.0, 1718
[2024-06-21 16:53:58] 2024-06-21 14:53:42,678 | INFO     | sum of square deviations: 2443580700.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,679 | INFO     | sum of deviations: 4530608592.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,679 | INFO     | mean x: 1718975179.0
[2024-06-21 16:53:58] 2024-06-21 14:53:42,679 | INFO     | mean y: 2369210.281407035
[2024-06-21 16:53:58] 2024-06-21 14:53:42,679 | INFO     | -- intersect: -3184758481.2297177
[2024-06-21 16:53:58] 2024-06-21 14:53:42,680 | INFO     | intersect: -3184758481.2297177
[2024-06-21 16:53:58] 2024-06-21 14:53:42,680 | INFO     | chi2: 0.00028766155100971456
[2024-06-21 16:53:58] 2024-06-21 14:53:42,680 | INFO     | -- intersect: -3184758481.2297177
[2024-06-21 16:53:58] 2024-06-21 14:53:42,680 | INFO     | current memory leak: 1.85 B/s (using 199 data points, chi2=0.00)
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | ..............................
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . Timing measurements:
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . get job = 0 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . initial setup = 1 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . payload setup = 21 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . stage-in = 0 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . payload execution = 14300 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . stage-out = 1 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | . log creation = 0 s
[2024-06-21 16:53:58] 2024-06-21 14:53:42,681 | INFO     | ..............................
[2024-06-21 16:53:58] 2024-06-21 14:53:43,133 | INFO     | 
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | job summary report
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | --------------------------------------------------
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | PanDA job id: 6238873713
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | task id: 40024049
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | errors: (none)
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | pilot state: finished 
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | transexitcode: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | exeerrorcode: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | exeerrordiag: 
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | exitcode: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:43,134 | INFO     | exitmsg: OK
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | cpuconsumptiontime: 53848 s
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | nevents: 400
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | neventsw: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | pid: 2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | pgrp: 2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | corecount: 4
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | event service: False
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | sizes: {0: 2386869, 11: 2386869, 15: 2387103, 22: 2387131, 14324: 2417673, 14326: 2426655, 14328: 2426839, 14344: 2427009}
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | --------------------------------------------------
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | 
[2024-06-21 16:53:58] 2024-06-21 14:53:43,135 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/1
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | job 6238873713 has completed (purged errors)
[2024-06-21 16:53:58] 2024-06-21 14:53:43,168 | INFO     | overall cleanup function is called
[2024-06-21 16:53:58] 2024-06-21 14:53:44,175 | INFO     | --- collectZombieJob: --- 10, [2112120]
[2024-06-21 16:53:58] 2024-06-21 14:53:44,176 | INFO     | zombie collector waiting for pid 2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:44,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:53:58] 2024-06-21 14:53:45,180 | INFO     | collected zombie processes
[2024-06-21 16:53:58] 2024-06-21 14:53:45,181 | INFO     | will now attempt to kill all subprocesses of pid=2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:45,475 | INFO     | process IDs to be killed: [2112120] (in reverse order)
[2024-06-21 16:53:58] 2024-06-21 14:53:45,732 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:53:58] 2024-06-21 14:53:45,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:53:58] 2024-06-21 14:53:45,754 | INFO     | did not find any defunct processes belonging to 2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:45,770 | INFO     | did not find any defunct processes belonging to 2112120
[2024-06-21 16:53:58] 2024-06-21 14:53:45,770 | INFO     | ready for new job
[2024-06-21 16:53:58] 2024-06-21 14:53:45,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:53:58] 2024-06-21 14:53:45,772 | INFO     | *************************************
[2024-06-21 16:53:58] 2024-06-21 14:53:45,772 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:53:58] 2024-06-21 14:53:45,772 | INFO     | *************************************
[2024-06-21 16:53:58] 2024-06-21 14:53:45,773 | INFO     | 
[2024-06-21 16:53:58] 2024-06-21 14:53:45,779 | INFO     | architecture information:
[2024-06-21 16:53:58] 2024-06-21 14:53:45,780 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:53:58] 2024-06-21 14:53:45,803 | INFO     | cat /etc/os-release:
[2024-06-21 16:53:58] NAME="CentOS Linux"
[2024-06-21 16:53:58] VERSION="7 (Core)"
[2024-06-21 16:53:58] ID="centos"
[2024-06-21 16:53:58] ID_LIKE="rhel fedora"
[2024-06-21 16:53:58] VERSION_ID="7"
[2024-06-21 16:53:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:53:58] ANSI_COLOR="0;31"
[2024-06-21 16:53:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:53:58] HOME_URL="https://www.centos.org/"
[2024-06-21 16:53:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:53:58] 
[2024-06-21 16:53:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:53:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:53:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:53:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:53:58] 
[2024-06-21 16:53:58] 2024-06-21 14:53:45,803 | INFO     | *************************************
[2024-06-21 16:53:58] 2024-06-21 14:53:46,306 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/1
[2024-06-21 16:53:58] 2024-06-21 14:53:46,332 | INFO     | sufficient remaining disk space (3142018138112 B)
[2024-06-21 16:53:58] 2024-06-21 14:53:46,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:53:58] 2024-06-21 14:53:46,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:53:58] 2024-06-21 14:53:46,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 16:53:58] 2024-06-21 14:53:46,333 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:53:58] 2024-06-21 14:53:46,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:53:58] 2024-06-21 14:53:46,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:53:58] 2024-06-21 14:53:46,386 | INFO     | all payload control threads have been joined
[2024-06-21 16:53:58] 2024-06-21 14:53:46,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 16:53:58] 2024-06-21 14:53:46,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 16:53:58] 2024-06-21 14:53:46,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:53:58] 2024-06-21 14:53:46,466 | INFO     | will abort loop
[2024-06-21 16:53:58] 2024-06-21 14:53:46,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:53:58] 2024-06-21 14:53:46,818 | INFO     | all data control threads have been joined
[2024-06-21 16:53:58] 2024-06-21 14:53:46,990 | INFO     | all job control threads have been joined
[2024-06-21 16:53:58] 2024-06-21 14:53:47,338 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,392 | INFO     | [payload] control thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,471 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,607 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,607 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,762 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:53:58] 2024-06-21 14:53:47,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:53:58] 2024-06-21 14:53:47,824 | INFO     | [data] control thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,879 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:47,996 | INFO     | [job] control thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:48,487 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:48,501 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:48,640 | INFO     | [job] validate thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:48,685 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:48,796 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:49,800 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:50,661 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:53:58] 2024-06-21 14:53:51,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47543332213824)>', '<ExcThread(monitor, started 47543533500160)>']
[2024-06-21 16:53:58] 2024-06-21 14:53:52,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:53:58] 2024-06-21 14:53:52,364 | INFO     | [monitor] control thread has ended
[2024-06-21 16:53:58] 2024-06-21 14:53:56,945 | INFO     | all workflow threads have been joined
[2024-06-21 16:53:58] 2024-06-21 14:53:56,946 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:53:58] 2024-06-21 14:53:56,946 | INFO     | traces error code: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:56,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:53:58] 2024-06-21 14:53:57,070 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:53:58] 2024-06-21 14:53:57,073 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:53:58] 2024-06-21 14:53:57,075 [wrapper] pilotpid: 2101797
[2024-06-21 16:53:58] 2024-06-21 14:53:57,078 [wrapper] Pilot exit status: 0
[2024-06-21 16:53:58] 2024-06-21 14:53:57,109 [wrapper] pandaids: 6238873713
[2024-06-21 16:53:58] 2024-06-21 14:53:57,239 [wrapper] cleanup supervisor_pilot 3173561 2101798
[2024-06-21 16:53:58] 2024-06-21 14:53:57,261 [wrapper] Test setup, not cleaning
[2024-06-21 16:53:58] 2024-06-21 14:53:57,273 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:53:58] 2024-06-21 14:53:57,275 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:53:58] 2024-06-21 14:53:57,278 [wrapper] apfmon messages muted
[2024-06-21 16:53:58]  *** Error codes and diagnostics ***
[2024-06-21 16:53:58]     "exeErrorCode": 0,
[2024-06-21 16:53:58]     "exeErrorDiag": "",
[2024-06-21 16:53:58]     "pilotErrorCode": 0,
[2024-06-21 16:53:58]     "pilotErrorDiag": "",
[2024-06-21 16:53:58]  *** Listing of results directory ***
[2024-06-21 16:53:58] total 876336
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:57 pilot3.tar.gz
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:59 queuedata.json
[2024-06-21 16:53:58] -rwx------ 1 boinc boinc     32308 Jun 20 16:59 runpilot2-wrapper.sh
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc       100 Jun 21 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:53:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 12:53 run_atlas
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc       105 Jun 21 12:53 job.xml
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc      6641 Jun 21 12:53 init_data.xml
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc 612613282 Jun 21 12:53 EVNT.40024047._000027.pool.root.1
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:53 start_atlas.sh
[2024-06-21 16:53:58] drwxrwx--x 2 boinc boinc      4096 Jun 21 12:53 shared
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc    482484 Jun 21 12:53 input.tar.gz
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc         0 Jun 21 12:53 boinc_lockfile
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc      2503 Jun 21 12:53 pandaJob.out
[2024-06-21 16:53:58] -rw------- 1 boinc boinc       424 Jun 21 12:53 setup.sh.local
[2024-06-21 16:53:58] -rw------- 1 boinc boinc   1023819 Jun 21 12:54 agis_schedconf.cvmfs.json
[2024-06-21 16:53:58] -rw------- 1 boinc boinc   1321251 Jun 21 12:54 cric_ddmendpoints.json
[2024-06-21 16:53:58] drwx------ 4 boinc boinc      4096 Jun 21 12:54 pilot3
[2024-06-21 16:53:58] -rw------- 1 boinc boinc 277720472 Jun 21 16:52 HITS.40024049._000412.pool.root.1
[2024-06-21 16:53:58] -rw------- 1 boinc boinc        95 Jun 21 16:52 pilot_heartbeat.json
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc       531 Jun 21 16:52 boinc_task_state.xml
[2024-06-21 16:53:58] -rw------- 1 boinc boinc      1041 Jun 21 16:53 memory_monitor_summary.json
[2024-06-21 16:53:58] -rw------- 1 boinc boinc         0 Jun 21 16:53 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:53:58] -rw------- 1 boinc boinc    338853 Jun 21 16:53 log.40024049._000412.job.log.tgz.1
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:53 boinc_mmap_file
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc        28 Jun 21 16:53 wrapper_checkpoint.txt
[2024-06-21 16:53:58] -rw------- 1 boinc boinc      7711 Jun 21 16:53 heartbeat.json
[2024-06-21 16:53:58] -rw------- 1 boinc boinc      4531 Jun 21 16:53 pilotlog.txt
[2024-06-21 16:53:58] -rw------- 1 boinc boinc   1410546 Jun 21 16:53 log.40024049._000412.job.log.1
[2024-06-21 16:53:58] -rw------- 1 boinc boinc       357 Jun 21 16:53 output.list
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:53 runtime_log
[2024-06-21 16:53:58] -rw------- 1 boinc boinc   1771520 Jun 21 16:53 result.tar.gz
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:53 runtime_log.err
[2024-06-21 16:53:58] -rw------- 1 boinc boinc       658 Jun 21 16:53 jSANDmuQYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmkKXKDm9YIasm.diag
[2024-06-21 16:53:58] -rw-r--r-- 1 boinc boinc     21360 Jun 21 16:53 stderr.txt
[2024-06-21 16:53:58] HITS file was successfully produced:
[2024-06-21 16:53:58] -rw------- 1 boinc boinc 277720472 Jun 21 16:52 shared/HITS.pool.root.1
[2024-06-21 16:53:58]  *** Contents of shared directory: ***
[2024-06-21 16:53:58] total 871700
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc 612613282 Jun 21 12:53 ATLAS.root_0
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:53 start_atlas.sh
[2024-06-21 16:53:58] -rw-r--r-- 2 boinc boinc    482484 Jun 21 12:53 input.tar.gz
[2024-06-21 16:53:58] -rw------- 1 boinc boinc 277720472 Jun 21 16:52 HITS.pool.root.1
[2024-06-21 16:53:58] -rw------- 1 boinc boinc   1771520 Jun 21 16:53 result.tar.gz
16:53:59 (2096944): run_atlas exited; CPU time 53532.173239
16:53:59 (2096944): called boinc_finish(0)

</stderr_txt>
]]>

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