Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:03:59 (3892818): wrapper (7.7.26015): starting
04:03:59 (3892818): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 04:03:59] Arguments: --nthreads 4
[2024-06-21 04:03:59] Threads: 4
[2024-06-21 04:03:59] Checking for CVMFS
[2024-06-21 04:03:59] No cvmfs_config command found, will try listing directly
[2024-06-21 04:03:59] CVMFS is ok
[2024-06-21 04:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 04:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 04:03:59] Further information can be found at the LHC@home message board.
[2024-06-21 04:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 04:03:59] Checking for apptainer binary...
[2024-06-21 04:03:59] which: no apptainer in ((null))
[2024-06-21 04:03:59] apptainer is not installed, using version from CVMFS
[2024-06-21 04:03:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 04:04:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-21 04:04:00] apptainer works
[2024-06-21 04:04:00] Set ATHENA_PROC_NUMBER=4
[2024-06-21 04:04:00] Set ATHENA_CORE_NUMBER=4
[2024-06-21 04:04:00] Starting ATLAS job with PandaID=6238873654
[2024-06-21 04:04:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 07:37:51]  *** The last 200 lines of the pilot log: ***
[2024-06-21 07:37:51] 2024-06-21 05:37:30,175 | INFO     | model: linear, x: [1718937323.0, 1718937384.0, 1718937445.0, 1718937506.0, 1718937567.0, 1718937628.0, 1718937689.0, 1718937750.0, 1718937811.0, 1718937872.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,175 | INFO     | sum of square deviations: 1778377530.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | sum of deviations: 3048318352.0000005
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | mean x: 1718942752.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | mean y: 2366947.195530726
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | -- intersect: -2944074204.1155663
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | intersect: -2944074204.1155663
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | chi2: 0.00046771390914636694
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | current chi2=0.00046771390914636694 (change=25.990950020408164 %)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,176 | INFO     | model: linear, x: [1718937628.0, 1718937689.0, 1718937750.0, 1718937811.0, 1718937872.0, 1718937933.0, 1718937994.0, 1718938055.0, 1718938116.0, 1718938177.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,177 | INFO     | sum of square deviations: 1633472487.5
[2024-06-21 07:37:51] 2024-06-21 05:37:30,177 | INFO     | sum of deviations: 2442333097.5
[2024-06-21 07:37:51] 2024-06-21 05:37:30,177 | INFO     | mean x: 1718942904.5
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | mean y: 2367584.132183908
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | -- intersect: -2567759051.302275
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | intersect: -2567759051.302275
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | chi2: 0.00029079368884419893
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | current chi2=0.00029079368884419893 (change=37.82658946899148 %)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | model: linear, x: [1718937933.0, 1718937994.0, 1718938055.0, 1718938116.0, 1718938177.0, 1718938238.0, 1718938299.0, 1718938360.0, 1718938421.0, 1718938482.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,178 | INFO     | sum of square deviations: 1496660620.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,179 | INFO     | sum of deviations: 1961288531.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,179 | INFO     | mean x: 1718943057.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,179 | INFO     | mean y: 2368120.479289941
[2024-06-21 07:37:51] 2024-06-21 05:37:30,179 | INFO     | -- intersect: -2250208888.6867423
[2024-06-21 07:37:51] 2024-06-21 05:37:30,179 | INFO     | intersect: -2250208888.6867423
[2024-06-21 07:37:51] 2024-06-21 05:37:30,180 | INFO     | chi2: 0.0001812636240084945
[2024-06-21 07:37:51] 2024-06-21 05:37:30,180 | INFO     | current chi2=0.0001812636240084945 (change=37.66590164698805 %)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,180 | INFO     | model: linear, x: [1718938238.0, 1718938299.0, 1718938360.0, 1718938421.0, 1718938482.0, 1718938543.0, 1718938604.0, 1718938665.0, 1718938726.0, 1718938787.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,180 | INFO     | sum of square deviations: 1367709365.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | sum of deviations: 1530330485.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | mean x: 1718943209.5
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | mean y: 2368628.8780487804
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | -- intersect: -1920957527.1007044
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | intersect: -1920957527.1007044
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | chi2: 6.690510214906725e-05
[2024-06-21 07:37:51] 2024-06-21 05:37:30,181 | INFO     | current chi2=6.690510214906725e-05 (change=63.08961463446637 %)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,182 | INFO     | model: linear, x: [1718938543.0, 1718938604.0, 1718938665.0, 1718938726.0, 1718938787.0, 1718938848.0, 1718938909.0, 1718938970.0, 1718939031.0, 1718939092.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,182 | INFO     | sum of square deviations: 1246386160.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,182 | INFO     | sum of deviations: 1386841466.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | mean x: 1718943362.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | mean y: 2368809.3584905663
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | -- intersect: -1910282348.55155
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | intersect: -1910282348.55155
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | chi2: 6.674394387586173e-05
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | current chi2=6.674394387586173e-05 (change=0.24087590935360373 %)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | left removable region: 100
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | model: linear, x: [1718941593.0, 1718941654.0, 1718941715.0, 1718941776.0, 1718941837.0, 1718941898.0, 1718941959.0, 1718942020.0, 1718942081.0, 1718942142.0, 1718
[2024-06-21 07:37:51] 2024-06-21 05:37:30,183 | INFO     | sum of square deviations: 338804492.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | sum of deviations: 316902869.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | mean x: 1718944704.0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | mean y: 2370442.718446602
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | -- intersect: -1605455076.75535
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | intersect: -1605455076.75535
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | chi2: 1.5354824755588974e-05
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | -- intersect: -1605455076.75535
[2024-06-21 07:37:51] 2024-06-21 05:37:30,184 | INFO     | current memory leak: 0.94 B/s (using 103 data points, chi2=0.00)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | ..............................
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . Timing measurements:
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . get job = 0 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . initial setup = 1 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . payload setup = 9 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . stage-in = 0 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . payload execution = 12749 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,185 | INFO     | . stage-out = 0 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,186 | INFO     | . log creation = 0 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,186 | INFO     | ..............................
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | 
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | job summary report
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | --------------------------------------------------
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | PanDA job id: 6238873654
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | task id: 40024049
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | errors: (none)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,249 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | pilot state: finished 
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | transexitcode: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | exeerrorcode: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | exeerrordiag: 
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | exitcode: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | exitmsg: OK
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | cpuconsumptiontime: 47462 s
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | nevents: 400
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | neventsw: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | pid: 3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | pgrp: 3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | corecount: 4
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | event service: False
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | sizes: {0: 2386868, 7: 2387074, 11: 2387102, 12762: 2416797, 12763: 2416796, 12764: 2426018, 12773: 2426132}
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | --------------------------------------------------
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | 
[2024-06-21 07:37:51] 2024-06-21 05:37:30,250 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 07:37:51] 2024-06-21 05:37:30,274 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 07:37:51] 2024-06-21 05:37:30,276 | INFO     | job 6238873654 has completed (purged errors)
[2024-06-21 07:37:51] 2024-06-21 05:37:30,277 | INFO     | overall cleanup function is called
[2024-06-21 07:37:51] 2024-06-21 05:37:31,284 | INFO     | --- collectZombieJob: --- 10, [3907972]
[2024-06-21 07:37:51] 2024-06-21 05:37:31,284 | INFO     | zombie collector waiting for pid 3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:31,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 07:37:51] 2024-06-21 05:37:32,289 | INFO     | collected zombie processes
[2024-06-21 07:37:51] 2024-06-21 05:37:32,289 | INFO     | will now attempt to kill all subprocesses of pid=3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:32,489 | INFO     | process IDs to be killed: [3907972] (in reverse order)
[2024-06-21 07:37:51] 2024-06-21 05:37:32,686 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 07:37:51] 2024-06-21 05:37:32,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 07:37:51] 2024-06-21 05:37:32,700 | INFO     | did not find any defunct processes belonging to 3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:32,708 | INFO     | did not find any defunct processes belonging to 3907972
[2024-06-21 07:37:51] 2024-06-21 05:37:32,708 | INFO     | ready for new job
[2024-06-21 07:37:51] 2024-06-21 05:37:32,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 07:37:51] 2024-06-21 05:37:32,710 | INFO     | *************************************
[2024-06-21 07:37:51] 2024-06-21 05:37:32,710 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 07:37:51] 2024-06-21 05:37:32,710 | INFO     | *************************************
[2024-06-21 07:37:51] 2024-06-21 05:37:32,710 | INFO     | 
[2024-06-21 07:37:51] 2024-06-21 05:37:32,714 | INFO     | architecture information:
[2024-06-21 07:37:51] 2024-06-21 05:37:32,714 | INFO     | executing command: cat /etc/os-release
[2024-06-21 07:37:51] 2024-06-21 05:37:32,736 | INFO     | cat /etc/os-release:
[2024-06-21 07:37:51] NAME="CentOS Linux"
[2024-06-21 07:37:51] VERSION="7 (Core)"
[2024-06-21 07:37:51] ID="centos"
[2024-06-21 07:37:51] ID_LIKE="rhel fedora"
[2024-06-21 07:37:51] VERSION_ID="7"
[2024-06-21 07:37:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 07:37:51] ANSI_COLOR="0;31"
[2024-06-21 07:37:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 07:37:51] HOME_URL="https://www.centos.org/"
[2024-06-21 07:37:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 07:37:51] 
[2024-06-21 07:37:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 07:37:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 07:37:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 07:37:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 07:37:51] 
[2024-06-21 07:37:51] 2024-06-21 05:37:32,736 | INFO     | *************************************
[2024-06-21 07:37:51] 2024-06-21 05:37:33,239 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 07:37:51] 2024-06-21 05:37:33,259 | INFO     | sufficient remaining disk space (3165334274048 B)
[2024-06-21 07:37:51] 2024-06-21 05:37:33,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 07:37:51] 2024-06-21 05:37:33,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 07:37:51] 2024-06-21 05:37:33,260 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 07:37:51] 2024-06-21 05:37:33,260 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 07:37:51] 2024-06-21 05:37:33,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 07:37:51] 2024-06-21 05:37:33,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 07:37:51] 2024-06-21 05:37:33,323 | INFO     | all data control threads have been joined
[2024-06-21 07:37:51] 2024-06-21 05:37:33,336 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 07:37:51] 2024-06-21 05:37:33,336 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 07:37:51] 2024-06-21 05:37:33,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:37:51] 2024-06-21 05:37:33,336 | INFO     | will abort loop
[2024-06-21 07:37:51] 2024-06-21 05:37:33,882 | INFO     | all job control threads have been joined
[2024-06-21 07:37:51] 2024-06-21 05:37:34,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 07:37:51] 2024-06-21 05:37:34,265 | INFO     | [job] retrieve thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,282 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,328 | INFO     | [data] control thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,341 | INFO     | [job] job monitor thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,381 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,505 | INFO     | [data] copytool_in thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:34,665 | INFO     | all payload control threads have been joined
[2024-06-21 07:37:51] 2024-06-21 05:37:34,887 | INFO     | [job] control thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:35,155 | INFO     | [payload] validate_post thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:35,253 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:35,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 07:37:51] 2024-06-21 05:37:35,467 | INFO     | [job] validate thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:35,542 | INFO     | [payload] failed_post thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:35,670 | INFO     | [payload] control thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:36,054 | INFO     | [data] copytool_out thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:36,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 07:37:51] 2024-06-21 05:37:36,264 | INFO     | [job] queue monitor thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:40,115 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:43,463 | INFO     | job.realtimelogging is not enabled
[2024-06-21 07:37:51] 2024-06-21 05:37:44,468 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 07:37:51] 2024-06-21 05:37:45,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47566984582208)>', '<ExcThread(monitor, started 47567435990784)>']
[2024-06-21 07:37:51] 2024-06-21 05:37:46,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 07:37:51] 2024-06-21 05:37:46,325 | INFO     | [monitor] control thread has ended
[2024-06-21 07:37:51] 2024-06-21 05:37:50,929 | INFO     | all workflow threads have been joined
[2024-06-21 07:37:51] 2024-06-21 05:37:50,929 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 07:37:51] 2024-06-21 05:37:50,929 | INFO     | traces error code: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:50,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 07:37:51] 2024-06-21 05:37:51,095 [wrapper] ==== pilot stdout END ====
[2024-06-21 07:37:51] 2024-06-21 05:37:51,097 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 07:37:51] 2024-06-21 05:37:51,099 [wrapper] pilotpid: 3899864
[2024-06-21 07:37:51] 2024-06-21 05:37:51,101 [wrapper] Pilot exit status: 0
[2024-06-21 07:37:51] 2024-06-21 05:37:51,111 [wrapper] pandaids: 6238873654
[2024-06-21 07:37:51] 2024-06-21 05:37:51,195 [wrapper] cleanup supervisor_pilot  779858 3899865
[2024-06-21 07:37:51] 2024-06-21 05:37:51,196 [wrapper] Test setup, not cleaning
[2024-06-21 07:37:51] 2024-06-21 05:37:51,199 [wrapper] ==== wrapper stdout END ====
[2024-06-21 07:37:51] 2024-06-21 05:37:51,202 [wrapper] ==== wrapper stderr END ====
[2024-06-21 07:37:51] 2024-06-21 05:37:51,206 [wrapper] apfmon messages muted
[2024-06-21 07:37:51]  *** Error codes and diagnostics ***
[2024-06-21 07:37:51]     "exeErrorCode": 0,
[2024-06-21 07:37:51]     "exeErrorDiag": "",
[2024-06-21 07:37:51]     "pilotErrorCode": 0,
[2024-06-21 07:37:51]     "pilotErrorDiag": "",
[2024-06-21 07:37:51]  *** Listing of results directory ***
[2024-06-21 07:37:51] total 878700
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:41 pilot3.tar.gz
[2024-06-21 07:37:51] -rwx------ 1 boinc boinc     32308 Jun 20 16:49 runpilot2-wrapper.sh
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:49 queuedata.json
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc       100 Jun 21 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 07:37:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 04:03 run_atlas
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc       105 Jun 21 04:03 job.xml
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc      6642 Jun 21 04:03 init_data.xml
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc 617450602 Jun 21 04:03 EVNT.40024047._000025.pool.root.1
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:03 start_atlas.sh
[2024-06-21 07:37:51] drwxrwx--x 2 boinc boinc      4096 Jun 21 04:03 shared
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc    482477 Jun 21 04:03 input.tar.gz
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc         0 Jun 21 04:03 boinc_lockfile
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc      2502 Jun 21 04:04 pandaJob.out
[2024-06-21 07:37:51] -rw------- 1 boinc boinc       424 Jun 21 04:04 setup.sh.local
[2024-06-21 07:37:51] -rw------- 1 boinc boinc   1024126 Jun 21 04:04 agis_schedconf.cvmfs.json
[2024-06-21 07:37:51] -rw------- 1 boinc boinc   1321251 Jun 21 04:04 cric_ddmendpoints.json
[2024-06-21 07:37:51] drwx------ 4 boinc boinc      4096 Jun 21 04:04 pilot3
[2024-06-21 07:37:51] -rw------- 1 boinc boinc 275456011 Jun 21 07:36 HITS.40024049._000354.pool.root.1
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc       532 Jun 21 07:36 boinc_task_state.xml
[2024-06-21 07:37:51] -rw------- 1 boinc boinc        95 Jun 21 07:37 pilot_heartbeat.json
[2024-06-21 07:37:51] -rw------- 1 boinc boinc      1038 Jun 21 07:37 memory_monitor_summary.json
[2024-06-21 07:37:51] -rw------- 1 boinc boinc         0 Jun 21 07:37 agis_ddmendpoints.agis.ALL.json
[2024-06-21 07:37:51] -rw------- 1 boinc boinc    318196 Jun 21 07:37 log.40024049._000354.job.log.tgz.1
[2024-06-21 07:37:51] -rw------- 1 boinc boinc      7716 Jun 21 07:37 heartbeat.json
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc        28 Jun 21 07:37 wrapper_checkpoint.txt
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc      8192 Jun 21 07:37 boinc_mmap_file
[2024-06-21 07:37:51] -rw------- 1 boinc boinc      4603 Jun 21 07:37 pilotlog.txt
[2024-06-21 07:37:51] -rw------- 1 boinc boinc   1354896 Jun 21 07:37 log.40024049._000354.job.log.1
[2024-06-21 07:37:51] -rw------- 1 boinc boinc       357 Jun 21 07:37 output.list
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc       620 Jun 21 07:37 runtime_log
[2024-06-21 07:37:51] -rw------- 1 boinc boinc   1689600 Jun 21 07:37 result.tar.gz
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc     11410 Jun 21 07:37 runtime_log.err
[2024-06-21 07:37:51] -rw------- 1 boinc boinc       659 Jun 21 07:37 CzdLDmiHYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmgGlKDmD0Q7Ko.diag
[2024-06-21 07:37:51] -rw-r--r-- 1 boinc boinc     21413 Jun 21 07:37 stderr.txt
[2024-06-21 07:37:51] HITS file was successfully produced:
[2024-06-21 07:37:51] -rw------- 1 boinc boinc 275456011 Jun 21 07:36 shared/HITS.pool.root.1
[2024-06-21 07:37:51]  *** Contents of shared directory: ***
[2024-06-21 07:37:51] total 874136
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc 617450602 Jun 21 04:03 ATLAS.root_0
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:03 start_atlas.sh
[2024-06-21 07:37:51] -rw-r--r-- 2 boinc boinc    482477 Jun 21 04:03 input.tar.gz
[2024-06-21 07:37:51] -rw------- 1 boinc boinc 275456011 Jun 21 07:36 HITS.pool.root.1
[2024-06-21 07:37:51] -rw------- 1 boinc boinc   1689600 Jun 21 07:37 result.tar.gz
07:37:53 (3892818): run_atlas exited; CPU time 46938.638971
07:37:53 (3892818): called boinc_finish(0)

</stderr_txt>
]]>

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