Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:43:20 (874545): wrapper (7.7.26015): starting
07:43:20 (874545): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 07:43:20] Arguments: --nthreads 4
[2024-06-21 07:43:20] Threads: 4
[2024-06-21 07:43:20] Checking for CVMFS
[2024-06-21 07:43:20] No cvmfs_config command found, will try listing directly
[2024-06-21 07:43:20] CVMFS is ok
[2024-06-21 07:43:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 07:43:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 07:43:20] Further information can be found at the LHC@home message board.
[2024-06-21 07:43:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 07:43:20] Checking for apptainer binary...
[2024-06-21 07:43:20] which: no apptainer in ((null))
[2024-06-21 07:43:20] apptainer is not installed, using version from CVMFS
[2024-06-21 07:43:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 07:43:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-21 07:43:21] apptainer works
[2024-06-21 07:43:21] Set ATHENA_PROC_NUMBER=4
[2024-06-21 07:43:21] Set ATHENA_CORE_NUMBER=4
[2024-06-21 07:43:21] Starting ATLAS job with PandaID=6238873658
[2024-06-21 07:43:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 11:09:49]  *** The last 200 lines of the pilot log: ***
[2024-06-21 11:09:49] 2024-06-21 09:09:27,646 | INFO     | intersect: -34031078643.58675
[2024-06-21 11:09:49] 2024-06-21 09:09:27,646 | INFO     | chi2: 1.6484453356073152
[2024-06-21 11:09:49] 2024-06-21 09:09:27,646 | INFO     | current chi2=1.6484453356073152 (change=61.21427758443847 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,646 | INFO     | model: linear, x: [1718949252.0, 1718949313.0, 1718949374.0, 1718949435.0, 1718949496.0, 1718949557.0, 1718949618.0, 1718949679.0, 1718949740.0, 1718949801.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,646 | INFO     | sum of square deviations: 2194675568.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,647 | INFO     | sum of deviations: 7727629755.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,647 | INFO     | mean x: 1718955077.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,647 | INFO     | mean y: 2361605.3541666665
[2024-06-21 11:09:49] 2024-06-21 09:09:27,647 | INFO     | -- intersect: -6050217918.507981
[2024-06-21 11:09:49] 2024-06-21 09:09:27,648 | INFO     | intersect: -6050217918.507981
[2024-06-21 11:09:49] 2024-06-21 09:09:27,648 | INFO     | chi2: 0.05142383651914641
[2024-06-21 11:09:49] 2024-06-21 09:09:27,648 | INFO     | current chi2=0.05142383651914641 (change=96.88046455600538 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,648 | INFO     | model: linear, x: [1718949557.0, 1718949618.0, 1718949679.0, 1718949740.0, 1718949801.0, 1718949862.0, 1718949923.0, 1718949984.0, 1718950045.0, 1718950106.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,648 | INFO     | sum of square deviations: 2027639878.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,649 | INFO     | sum of deviations: 2608657436.0000005
[2024-06-21 11:09:49] 2024-06-21 09:09:27,649 | INFO     | mean x: 1718955230.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,649 | INFO     | mean y: 2366220.887700535
[2024-06-21 11:09:49] 2024-06-21 09:09:27,649 | INFO     | -- intersect: -2209153384.513644
[2024-06-21 11:09:49] 2024-06-21 09:09:27,650 | INFO     | intersect: -2209153384.513644
[2024-06-21 11:09:49] 2024-06-21 09:09:27,650 | INFO     | chi2: 0.0009219666098203459
[2024-06-21 11:09:49] 2024-06-21 09:09:27,650 | INFO     | current chi2=0.0009219666098203459 (change=98.20712208145522 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,650 | INFO     | model: linear, x: [1718949862.0, 1718949923.0, 1718949984.0, 1718950045.0, 1718950106.0, 1718950167.0, 1718950228.0, 1718950289.0, 1718950350.0, 1718950411.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,650 | INFO     | sum of square deviations: 1869302025.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,651 | INFO     | sum of deviations: 1639425935.0000002
[2024-06-21 11:09:49] 2024-06-21 09:09:27,651 | INFO     | mean x: 1718955382.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,651 | INFO     | mean y: 2367151.6373626376
[2024-06-21 11:09:49] 2024-06-21 09:09:27,651 | INFO     | -- intersect: -1505200912.1294122
[2024-06-21 11:09:49] 2024-06-21 09:09:27,651 | INFO     | intersect: -1505200912.1294122
[2024-06-21 11:09:49] 2024-06-21 09:09:27,652 | INFO     | chi2: 0.00015892600971227855
[2024-06-21 11:09:49] 2024-06-21 09:09:27,652 | INFO     | current chi2=0.00015892600971227855 (change=82.76228140808193 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,652 | INFO     | model: linear, x: [1718950167.0, 1718950228.0, 1718950289.0, 1718950350.0, 1718950411.0, 1718950472.0, 1718950533.0, 1718950594.0, 1718950655.0, 1718950716.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,652 | INFO     | sum of square deviations: 1719429448.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | sum of deviations: 1535951879.0000002
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | mean x: 1718955535.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | mean y: 2367254.02259887
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | -- intersect: -1533161282.4763877
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | intersect: -1533161282.4763877
[2024-06-21 11:09:49] 2024-06-21 09:09:27,653 | INFO     | chi2: 5.3098182228284524e-05
[2024-06-21 11:09:49] 2024-06-21 09:09:27,654 | INFO     | current chi2=5.3098182228284524e-05 (change=66.5893692766753 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,654 | INFO     | model: linear, x: [1718950472.0, 1718950533.0, 1718950594.0, 1718950655.0, 1718950716.0, 1718950777.0, 1718950838.0, 1718950899.0, 1718950960.0, 1718951021.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,654 | INFO     | sum of square deviations: 1577789583.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | sum of deviations: 1372393158.5000002
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | mean x: 1718955687.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | mean y: 2367430.0290697673
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | -- intersect: -1492814849.4762352
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | intersect: -1492814849.4762352
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | chi2: 5.108945949948353e-05
[2024-06-21 11:09:49] 2024-06-21 09:09:27,655 | INFO     | current chi2=5.108945949948353e-05 (change=3.783034831898593 %)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,656 | INFO     | left removable region: 60
[2024-06-21 11:09:49] 2024-06-21 09:09:27,656 | INFO     | model: linear, x: [1718952302.0, 1718952363.0, 1718952424.0, 1718952485.0, 1718952546.0, 1718952607.0, 1718952668.0, 1718952729.0, 1718952790.0, 1718952851.0, 1718
[2024-06-21 11:09:49] 2024-06-21 09:09:27,656 | INFO     | sum of square deviations: 779958810.0
[2024-06-21 11:09:49] 2024-06-21 09:09:27,656 | INFO     | sum of deviations: 490957005.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | mean x: 1718956419.5
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | mean y: 2368488.419117647
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | -- intersect: -1079654928.0517108
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | intersect: -1079654928.0517108
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | chi2: 2.123441687347173e-05
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | -- intersect: -1079654928.0517108
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | current memory leak: 0.63 B/s (using 136 data points, chi2=0.00)
[2024-06-21 11:09:49] 2024-06-21 09:09:27,657 | INFO     | ..............................
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . Timing measurements:
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . get job = 0 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . initial setup = 1 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . payload setup = 6 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . stage-in = 0 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . payload execution = 12314 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . stage-out = 0 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | . log creation = 0 s
[2024-06-21 11:09:49] 2024-06-21 09:09:27,658 | INFO     | ..............................
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | 
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | job summary report
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | --------------------------------------------------
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | PanDA job id: 6238873658
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | task id: 40024049
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | errors: (none)
[2024-06-21 11:09:49] 2024-06-21 09:09:28,055 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | pilot state: finished 
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | transexitcode: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | exeerrorcode: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | exeerrordiag: 
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | exitcode: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | exitmsg: OK
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | cpuconsumptiontime: 46054 s
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | nevents: 400
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | neventsw: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | pid: 898225
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | pgrp: 898225
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | corecount: 4
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | event service: False
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | sizes: {0: 2386818, 6: 2387024, 11: 2387052, 12325: 2416693, 12327: 2425675, 12330: 2425731, 12339: 2426029}
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | --------------------------------------------------
[2024-06-21 11:09:49] 2024-06-21 09:09:28,056 | INFO     | 
[2024-06-21 11:09:49] 2024-06-21 09:09:28,057 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 11:09:49] 2024-06-21 09:09:28,084 | INFO     | job 6238873658 has completed (purged errors)
[2024-06-21 11:09:49] 2024-06-21 09:09:28,085 | INFO     | overall cleanup function is called
[2024-06-21 11:09:49] 2024-06-21 09:09:29,092 | INFO     | --- collectZombieJob: --- 10, [898225]
[2024-06-21 11:09:49] 2024-06-21 09:09:29,092 | INFO     | zombie collector waiting for pid 898225
[2024-06-21 11:09:49] 2024-06-21 09:09:29,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 11:09:49] 2024-06-21 09:09:30,097 | INFO     | collected zombie processes
[2024-06-21 11:09:49] 2024-06-21 09:09:30,097 | INFO     | will now attempt to kill all subprocesses of pid=898225
[2024-06-21 11:09:49] 2024-06-21 09:09:30,292 | INFO     | process IDs to be killed: [898225] (in reverse order)
[2024-06-21 11:09:49] 2024-06-21 09:09:30,452 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 11:09:49] 2024-06-21 09:09:30,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 11:09:49] 2024-06-21 09:09:30,470 | INFO     | did not find any defunct processes belonging to 898225
[2024-06-21 11:09:49] 2024-06-21 09:09:30,486 | INFO     | did not find any defunct processes belonging to 898225
[2024-06-21 11:09:49] 2024-06-21 09:09:30,486 | INFO     | ready for new job
[2024-06-21 11:09:49] 2024-06-21 09:09:30,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 11:09:49] 2024-06-21 09:09:30,488 | INFO     | *************************************
[2024-06-21 11:09:49] 2024-06-21 09:09:30,488 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 11:09:49] 2024-06-21 09:09:30,488 | INFO     | *************************************
[2024-06-21 11:09:49] 2024-06-21 09:09:30,488 | INFO     | 
[2024-06-21 11:09:49] 2024-06-21 09:09:30,494 | INFO     | architecture information:
[2024-06-21 11:09:49] 2024-06-21 09:09:30,496 | INFO     | executing command: cat /etc/os-release
[2024-06-21 11:09:49] 2024-06-21 09:09:30,514 | INFO     | cat /etc/os-release:
[2024-06-21 11:09:49] NAME="CentOS Linux"
[2024-06-21 11:09:49] VERSION="7 (Core)"
[2024-06-21 11:09:49] ID="centos"
[2024-06-21 11:09:49] ID_LIKE="rhel fedora"
[2024-06-21 11:09:49] VERSION_ID="7"
[2024-06-21 11:09:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 11:09:49] ANSI_COLOR="0;31"
[2024-06-21 11:09:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 11:09:49] HOME_URL="https://www.centos.org/"
[2024-06-21 11:09:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 11:09:49] 
[2024-06-21 11:09:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 11:09:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 11:09:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 11:09:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 11:09:49] 
[2024-06-21 11:09:49] 2024-06-21 09:09:30,515 | INFO     | *************************************
[2024-06-21 11:09:49] 2024-06-21 09:09:31,017 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-06-21 11:09:49] 2024-06-21 09:09:31,043 | INFO     | sufficient remaining disk space (3169162625024 B)
[2024-06-21 11:09:49] 2024-06-21 09:09:31,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 11:09:49] 2024-06-21 09:09:31,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 11:09:49] 2024-06-21 09:09:31,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:09:49] 2024-06-21 09:09:31,044 | INFO     | aborting loop
[2024-06-21 11:09:49] 2024-06-21 09:09:31,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 11:09:49] 2024-06-21 09:09:31,216 | INFO     | all job control threads have been joined
[2024-06-21 11:09:49] 2024-06-21 09:09:31,359 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 11:09:49] 2024-06-21 09:09:31,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 11:09:49] 2024-06-21 09:09:31,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 11:09:49] 2024-06-21 09:09:31,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 11:09:49] 2024-06-21 09:09:31,886 | INFO     | all data control threads have been joined
[2024-06-21 11:09:49] 2024-06-21 09:09:32,049 | INFO     | [job] retrieve thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,050 | INFO     | [job] job monitor thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,153 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,198 | INFO     | all payload control threads have been joined
[2024-06-21 11:09:49] 2024-06-21 09:09:32,222 | INFO     | [job] control thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,262 | INFO     | [job] validate thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,407 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,424 | INFO     | [payload] failed_post thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,486 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:32,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:09:49] 2024-06-21 09:09:32,891 | INFO     | [data] control thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:33,203 | INFO     | [payload] control thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:33,285 | INFO     | [data] copytool_in thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:33,333 | INFO     | [payload] validate_post thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:33,763 | INFO     | [job] queue monitor thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:33,812 | INFO     | [data] copytool_out thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:35,054 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:41,613 | INFO     | job.realtimelogging is not enabled
[2024-06-21 11:09:49] 2024-06-21 09:09:42,618 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 11:09:49] 2024-06-21 09:09:43,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47959503123520)>', '<ExcThread(monitor, started 47960094156544)>']
[2024-06-21 11:09:49] 2024-06-21 09:09:43,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 11:09:49] 2024-06-21 09:09:43,419 | INFO     | [monitor] control thread has ended
[2024-06-21 11:09:49] 2024-06-21 09:09:48,082 | INFO     | all workflow threads have been joined
[2024-06-21 11:09:49] 2024-06-21 09:09:48,082 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 11:09:49] 2024-06-21 09:09:48,082 | INFO     | traces error code: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:48,082 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 11:09:49] 2024-06-21 09:09:48,201 [wrapper] ==== pilot stdout END ====
[2024-06-21 11:09:49] 2024-06-21 09:09:48,204 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 11:09:49] 2024-06-21 09:09:48,212 [wrapper] pilotpid: 888201
[2024-06-21 11:09:49] 2024-06-21 09:09:48,214 [wrapper] Pilot exit status: 0
[2024-06-21 11:09:49] 2024-06-21 09:09:48,229 [wrapper] pandaids: 6238873658
[2024-06-21 11:09:49] 2024-06-21 09:09:48,324 [wrapper] cleanup supervisor_pilot 1864633 888203
[2024-06-21 11:09:49] 2024-06-21 09:09:48,327 [wrapper] Test setup, not cleaning
[2024-06-21 11:09:49] 2024-06-21 09:09:48,331 [wrapper] ==== wrapper stdout END ====
[2024-06-21 11:09:49] 2024-06-21 09:09:48,333 [wrapper] ==== wrapper stderr END ====
[2024-06-21 11:09:49] 2024-06-21 09:09:48,337 [wrapper] apfmon messages muted
[2024-06-21 11:09:49]  *** Error codes and diagnostics ***
[2024-06-21 11:09:49]     "exeErrorCode": 0,
[2024-06-21 11:09:49]     "exeErrorDiag": "",
[2024-06-21 11:09:49]     "pilotErrorCode": 0,
[2024-06-21 11:09:49]     "pilotErrorDiag": "",
[2024-06-21 11:09:49]  *** Listing of results directory ***
[2024-06-21 11:09:49] total 877740
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:41 pilot3.tar.gz
[2024-06-21 11:09:49] -rwx------ 1 boinc boinc     32308 Jun 20 16:47 runpilot2-wrapper.sh
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:47 queuedata.json
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc       100 Jun 21 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 11:09:49] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 07:43 run_atlas
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc       105 Jun 21 07:43 job.xml
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc      6642 Jun 21 07:43 init_data.xml
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc 617450602 Jun 21 07:43 EVNT.40024047._000025.pool.root.1
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:43 start_atlas.sh
[2024-06-21 11:09:49] drwxrwx--x 2 boinc boinc      4096 Jun 21 07:43 shared
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc    482482 Jun 21 07:43 input.tar.gz
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc         0 Jun 21 07:43 boinc_lockfile
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc      2502 Jun 21 07:43 pandaJob.out
[2024-06-21 11:09:49] -rw------- 1 boinc boinc       424 Jun 21 07:43 setup.sh.local
[2024-06-21 11:09:49] -rw------- 1 boinc boinc   1024115 Jun 21 07:43 agis_schedconf.cvmfs.json
[2024-06-21 11:09:49] -rw------- 1 boinc boinc   1321251 Jun 21 07:43 cric_ddmendpoints.json
[2024-06-21 11:09:49] drwx------ 4 boinc boinc      4096 Jun 21 07:43 pilot3
[2024-06-21 11:09:49] -rw------- 1 boinc boinc 274715786 Jun 21 11:08 HITS.40024049._000358.pool.root.1
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc       531 Jun 21 11:08 boinc_task_state.xml
[2024-06-21 11:09:49] -rw------- 1 boinc boinc      1036 Jun 21 11:09 memory_monitor_summary.json
[2024-06-21 11:09:49] -rw------- 1 boinc boinc         0 Jun 21 11:09 agis_ddmendpoints.agis.ALL.json
[2024-06-21 11:09:49] -rw------- 1 boinc boinc    315403 Jun 21 11:09 log.40024049._000358.job.log.tgz.1
[2024-06-21 11:09:49] -rw------- 1 boinc boinc        95 Jun 21 11:09 pilot_heartbeat.json
[2024-06-21 11:09:49] -rw------- 1 boinc boinc      7707 Jun 21 11:09 heartbeat.json
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc      8192 Jun 21 11:09 boinc_mmap_file
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc        28 Jun 21 11:09 wrapper_checkpoint.txt
[2024-06-21 11:09:49] -rw------- 1 boinc boinc      4294 Jun 21 11:09 pilotlog.txt
[2024-06-21 11:09:49] -rw------- 1 boinc boinc   1232912 Jun 21 11:09 log.40024049._000358.job.log.1
[2024-06-21 11:09:49] -rw------- 1 boinc boinc       357 Jun 21 11:09 output.list
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc       620 Jun 21 11:09 runtime_log
[2024-06-21 11:09:49] -rw------- 1 boinc boinc   1566720 Jun 21 11:09 result.tar.gz
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc     11410 Jun 21 11:09 runtime_log.err
[2024-06-21 11:09:49] -rw------- 1 boinc boinc       657 Jun 21 11:09 TQOODmkFYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmWGlKDmq0BUkm.diag
[2024-06-21 11:09:49] -rw-r--r-- 1 boinc boinc     21335 Jun 21 11:09 stderr.txt
[2024-06-21 11:09:49] HITS file was successfully produced:
[2024-06-21 11:09:49] -rw------- 1 boinc boinc 274715786 Jun 21 11:08 shared/HITS.pool.root.1
[2024-06-21 11:09:49]  *** Contents of shared directory: ***
[2024-06-21 11:09:49] total 873292
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc 617450602 Jun 21 07:43 ATLAS.root_0
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:43 start_atlas.sh
[2024-06-21 11:09:49] -rw-r--r-- 2 boinc boinc    482482 Jun 21 07:43 input.tar.gz
[2024-06-21 11:09:49] -rw------- 1 boinc boinc 274715786 Jun 21 11:08 HITS.pool.root.1
[2024-06-21 11:09:49] -rw------- 1 boinc boinc   1566720 Jun 21 11:09 result.tar.gz
11:09:50 (874545): run_atlas exited; CPU time 45632.636492
11:09:50 (874545): called boinc_finish(0)

</stderr_txt>
]]>

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