Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:14:24 (1492889): wrapper (7.7.26015): starting
02:14:24 (1492889): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 02:14:24] Arguments: --nthreads 4
[2024-06-21 02:14:24] Threads: 4
[2024-06-21 02:14:24] Checking for CVMFS
[2024-06-21 02:14:24] No cvmfs_config command found, will try listing directly
[2024-06-21 02:14:24] CVMFS is ok
[2024-06-21 02:14:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 02:14:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 02:14:24] Further information can be found at the LHC@home message board.
[2024-06-21 02:14:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 02:14:24] Checking for apptainer binary...
[2024-06-21 02:14:24] which: no apptainer in ((null))
[2024-06-21 02:14:24] apptainer is not installed, using version from CVMFS
[2024-06-21 02:14:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 02:14:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 02:14:25] apptainer works
[2024-06-21 02:14:25] Set ATHENA_PROC_NUMBER=4
[2024-06-21 02:14:25] Set ATHENA_CORE_NUMBER=4
[2024-06-21 02:14:25] Starting ATLAS job with PandaID=6238873604
[2024-06-21 02:14:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 06:40:44]  *** The last 200 lines of the pilot log: ***
[2024-06-21 06:40:44] 2024-06-21 04:40:22,505 | INFO     | chi2: 3.5397682886944937
[2024-06-21 06:40:44] 2024-06-21 04:40:22,505 | INFO     | model: linear, x: [1718928959.0, 1718929020.0, 1718929081.0, 1718929142.0, 1718929203.0, 1718929264.0, 1718929325.0, 1718929386.0, 1718929447.0, 1718929508.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,506 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,508 | INFO     | sum of deviations: 111511624803.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,508 | INFO     | mean x: 1718936706.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,508 | INFO     | mean y: 2330439.682352941
[2024-06-21 06:40:44] 2024-06-21 04:40:22,508 | INFO     | -- intersect: -37278685870.99438
[2024-06-21 06:40:44] 2024-06-21 04:40:22,508 | INFO     | intersect: -37278685870.99438
[2024-06-21 06:40:44] 2024-06-21 04:40:22,509 | INFO     | chi2: 3.5399205922595427
[2024-06-21 06:40:44] 2024-06-21 04:40:22,509 | INFO     | current chi2=3.5399205922595427 (change=-0.004302642224788085 %)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,509 | INFO     | right removable region: 254
[2024-06-21 06:40:44] 2024-06-21 04:40:22,509 | INFO     | model: linear, x: [1718929264.0, 1718929325.0, 1718929386.0, 1718929447.0, 1718929508.0, 1718929569.0, 1718929630.0, 1718929691.0, 1718929752.0, 1718929813.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,509 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,511 | INFO     | sum of deviations: 57328269212.00001
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | mean x: 1718937011.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | mean y: 2359781.7921568626
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | -- intersect: -19163861879.45443
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | intersect: -19163861879.45443
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | chi2: 1.3795198235720394
[2024-06-21 06:40:44] 2024-06-21 04:40:22,512 | INFO     | current chi2=1.3795198235720394 (change=61.02796253703878 %)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,513 | INFO     | model: linear, x: [1718929569.0, 1718929630.0, 1718929691.0, 1718929752.0, 1718929813.0, 1718929874.0, 1718929935.0, 1718929996.0, 1718930057.0, 1718930118.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,513 | INFO     | sum of square deviations: 4844974562.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,515 | INFO     | sum of deviations: 10599272221.000002
[2024-06-21 06:40:44] 2024-06-21 04:40:22,515 | INFO     | mean x: 1718937163.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,515 | INFO     | mean y: 2383816.368
[2024-06-21 06:40:44] 2024-06-21 04:40:22,516 | INFO     | -- intersect: -3758107119.487164
[2024-06-21 06:40:44] 2024-06-21 04:40:22,516 | INFO     | intersect: -3758107119.487164
[2024-06-21 06:40:44] 2024-06-21 04:40:22,516 | INFO     | chi2: 0.07373079692711876
[2024-06-21 06:40:44] 2024-06-21 04:40:22,516 | INFO     | current chi2=0.07373079692711876 (change=94.65532892914833 %)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,517 | INFO     | model: linear, x: [1718929874.0, 1718929935.0, 1718929996.0, 1718930057.0, 1718930118.0, 1718930179.0, 1718930240.0, 1718930301.0, 1718930362.0, 1718930423.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,517 | INFO     | sum of square deviations: 4560048290.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,519 | INFO     | sum of deviations: 2211539994.0000005
[2024-06-21 06:40:44] 2024-06-21 04:40:22,519 | INFO     | mean x: 1718937316.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,519 | INFO     | mean y: 2388268.0530612245
[2024-06-21 06:40:44] 2024-06-21 04:40:22,519 | INFO     | -- intersect: -831264882.0351841
[2024-06-21 06:40:44] 2024-06-21 04:40:22,519 | INFO     | intersect: -831264882.0351841
[2024-06-21 06:40:44] 2024-06-21 04:40:22,520 | INFO     | chi2: 0.00333750284138374
[2024-06-21 06:40:44] 2024-06-21 04:40:22,520 | INFO     | current chi2=0.00333750284138374 (change=95.47339377779574 %)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,520 | INFO     | model: linear, x: [1718930179.0, 1718930240.0, 1718930301.0, 1718930362.0, 1718930423.0, 1718930484.0, 1718930545.0, 1718930606.0, 1718930667.0, 1718930728.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,520 | INFO     | sum of square deviations: 4286517580.0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,522 | INFO     | sum of deviations: 1803832464.0000014
[2024-06-21 06:40:44] 2024-06-21 04:40:22,522 | INFO     | mean x: 1718937468.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,522 | INFO     | mean y: 2388494.908333333
[2024-06-21 06:40:44] 2024-06-21 04:40:22,522 | INFO     | -- intersect: -720966804.9120585
[2024-06-21 06:40:44] 2024-06-21 04:40:22,522 | INFO     | intersect: -720966804.9120585
[2024-06-21 06:40:44] 2024-06-21 04:40:22,523 | INFO     | chi2: 0.0032447427196423593
[2024-06-21 06:40:44] 2024-06-21 04:40:22,523 | INFO     | current chi2=0.0032447427196423593 (change=2.7793271241957083 %)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,523 | INFO     | left removable region: 40
[2024-06-21 06:40:44] 2024-06-21 04:40:22,523 | INFO     | model: linear, x: [1718931399.0, 1718931460.0, 1718931521.0, 1718931582.0, 1718931643.0, 1718931704.0, 1718931765.0, 1718931826.0, 1718931887.0, 1718931948.0, 1718
[2024-06-21 06:40:44] 2024-06-21 04:40:22,524 | INFO     | sum of square deviations: 3038856977.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,525 | INFO     | sum of deviations: 2669604457.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,525 | INFO     | mean x: 1718937895.5
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | mean y: 2387353.6588785048
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | -- intersect: -1507681827.6053355
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | intersect: -1507681827.6053355
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | chi2: 0.002478366773101186
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | -- intersect: -1507681827.6053355
[2024-06-21 06:40:44] 2024-06-21 04:40:22,526 | INFO     | current memory leak: 0.88 B/s (using 214 data points, chi2=0.00)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | ..............................
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | . Timing measurements:
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | . get job = 0 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | . initial setup = 2 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | . payload setup = 16 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,527 | INFO     | . stage-in = 0 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,528 | INFO     | . payload execution = 15854 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,528 | INFO     | . stage-out = 1 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,528 | INFO     | . log creation = 0 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,528 | INFO     | ..............................
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | 
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | job summary report
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | --------------------------------------------------
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | PanDA job id: 6238873604
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | task id: 40024049
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | errors: (none)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,608 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | pilot state: finished 
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | transexitcode: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | exeerrorcode: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | exeerrordiag: 
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | exitcode: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | exitmsg: OK
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | cpuconsumptiontime: 60255 s
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | nevents: 400
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | neventsw: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | pid: 1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | pgrp: 1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | corecount: 4
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | event service: False
[2024-06-21 06:40:44] 2024-06-21 04:40:22,609 | INFO     | sizes: {0: 2386647, 1: 2386846, 12: 2386846, 21: 2387080, 23: 2387108, 15874: 2418301, 15876: 2427283, 15878: 2427339, 15888: 2427509}
[2024-06-21 06:40:44] 2024-06-21 04:40:22,610 | INFO     | --------------------------------------------------
[2024-06-21 06:40:44] 2024-06-21 04:40:22,610 | INFO     | 
[2024-06-21 06:40:44] 2024-06-21 04:40:22,610 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | job 6238873604 has completed (purged errors)
[2024-06-21 06:40:44] 2024-06-21 04:40:22,634 | INFO     | overall cleanup function is called
[2024-06-21 06:40:44] 2024-06-21 04:40:23,641 | INFO     | --- collectZombieJob: --- 10, [1507326]
[2024-06-21 06:40:44] 2024-06-21 04:40:23,641 | INFO     | zombie collector waiting for pid 1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:23,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 06:40:44] 2024-06-21 04:40:24,646 | INFO     | collected zombie processes
[2024-06-21 06:40:44] 2024-06-21 04:40:24,646 | INFO     | will now attempt to kill all subprocesses of pid=1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:24,807 | INFO     | process IDs to be killed: [1507326] (in reverse order)
[2024-06-21 06:40:44] 2024-06-21 04:40:24,910 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 06:40:44] 2024-06-21 04:40:24,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 06:40:44] 2024-06-21 04:40:24,917 | INFO     | did not find any defunct processes belonging to 1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:24,923 | INFO     | did not find any defunct processes belonging to 1507326
[2024-06-21 06:40:44] 2024-06-21 04:40:24,923 | INFO     | ready for new job
[2024-06-21 06:40:44] 2024-06-21 04:40:24,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 06:40:44] 2024-06-21 04:40:24,925 | INFO     | *************************************
[2024-06-21 06:40:44] 2024-06-21 04:40:24,925 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 06:40:44] 2024-06-21 04:40:24,926 | INFO     | *************************************
[2024-06-21 06:40:44] 2024-06-21 04:40:24,926 | INFO     | 
[2024-06-21 06:40:44] 2024-06-21 04:40:24,928 | INFO     | architecture information:
[2024-06-21 06:40:44] 2024-06-21 04:40:24,929 | INFO     | executing command: cat /etc/os-release
[2024-06-21 06:40:44] 2024-06-21 04:40:24,944 | INFO     | cat /etc/os-release:
[2024-06-21 06:40:44] NAME="CentOS Linux"
[2024-06-21 06:40:44] VERSION="7 (Core)"
[2024-06-21 06:40:44] ID="centos"
[2024-06-21 06:40:44] ID_LIKE="rhel fedora"
[2024-06-21 06:40:44] VERSION_ID="7"
[2024-06-21 06:40:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 06:40:44] ANSI_COLOR="0;31"
[2024-06-21 06:40:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 06:40:44] HOME_URL="https://www.centos.org/"
[2024-06-21 06:40:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 06:40:44] 
[2024-06-21 06:40:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 06:40:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 06:40:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 06:40:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 06:40:44] 
[2024-06-21 06:40:44] 2024-06-21 04:40:24,945 | INFO     | *************************************
[2024-06-21 06:40:44] 2024-06-21 04:40:25,445 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-06-21 06:40:44] 2024-06-21 04:40:25,471 | INFO     | sufficient remaining disk space (664058986496 B)
[2024-06-21 06:40:44] 2024-06-21 04:40:25,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 06:40:44] 2024-06-21 04:40:25,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 06:40:44] 2024-06-21 04:40:25,472 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 06:40:44] 2024-06-21 04:40:25,472 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 06:40:44] 2024-06-21 04:40:25,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 06:40:44] 2024-06-21 04:40:25,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 06:40:44] 2024-06-21 04:40:25,597 | INFO     | all data control threads have been joined
[2024-06-21 06:40:44] 2024-06-21 04:40:25,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 06:40:44] 2024-06-21 04:40:25,772 | INFO     | aborting loop
[2024-06-21 06:40:44] 2024-06-21 04:40:26,015 | INFO     | all payload control threads have been joined
[2024-06-21 06:40:44] 2024-06-21 04:40:26,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 06:40:44] 2024-06-21 04:40:26,323 | INFO     | all job control threads have been joined
[2024-06-21 06:40:44] 2024-06-21 04:40:26,476 | INFO     | [job] retrieve thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:26,602 | INFO     | [data] control thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:26,655 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:26,777 | INFO     | [job] job monitor thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:26,919 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,020 | INFO     | [payload] control thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,055 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,115 | INFO     | [job] validate thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,236 | INFO     | [data] copytool_in thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,328 | INFO     | [job] control thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:27,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 06:40:44] 2024-06-21 04:40:27,865 | INFO     | [payload] validate_post thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:28,066 | INFO     | [payload] failed_post thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:28,150 | INFO     | [data] copytool_out thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:28,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 06:40:44] 2024-06-21 04:40:28,623 | INFO     | [job] queue monitor thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:32,385 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:36,200 | INFO     | job.realtimelogging is not enabled
[2024-06-21 06:40:44] 2024-06-21 04:40:37,205 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 06:40:44] 2024-06-21 04:40:38,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47137578665024)>', '<ExcThread(monitor, started 47137767343872)>']
[2024-06-21 06:40:44] 2024-06-21 04:40:39,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 06:40:44] 2024-06-21 04:40:39,533 | INFO     | [monitor] control thread has ended
[2024-06-21 06:40:44] 2024-06-21 04:40:43,685 | INFO     | all workflow threads have been joined
[2024-06-21 06:40:44] 2024-06-21 04:40:43,685 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 06:40:44] 2024-06-21 04:40:43,686 | INFO     | traces error code: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:43,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 06:40:44] 2024-06-21 04:40:43,827 [wrapper] ==== pilot stdout END ====
[2024-06-21 06:40:44] 2024-06-21 04:40:43,829 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 06:40:44] 2024-06-21 04:40:43,831 [wrapper] pilotpid: 1497535
[2024-06-21 06:40:44] 2024-06-21 04:40:43,833 [wrapper] Pilot exit status: 0
[2024-06-21 06:40:44] 2024-06-21 04:40:43,848 [wrapper] pandaids: 6238873604
[2024-06-21 06:40:44] 2024-06-21 04:40:43,913 [wrapper] cleanup supervisor_pilot 2153416 1497536
[2024-06-21 06:40:44] 2024-06-21 04:40:43,919 [wrapper] Test setup, not cleaning
[2024-06-21 06:40:44] 2024-06-21 04:40:43,922 [wrapper] ==== wrapper stdout END ====
[2024-06-21 06:40:44] 2024-06-21 04:40:43,924 [wrapper] ==== wrapper stderr END ====
[2024-06-21 06:40:44] 2024-06-21 04:40:43,932 [wrapper] apfmon messages muted
[2024-06-21 06:40:44]  *** Error codes and diagnostics ***
[2024-06-21 06:40:44]     "exeErrorCode": 0,
[2024-06-21 06:40:44]     "exeErrorDiag": "",
[2024-06-21 06:40:44]     "pilotErrorCode": 0,
[2024-06-21 06:40:44]     "pilotErrorDiag": "",
[2024-06-21 06:40:44]  *** Listing of results directory ***
[2024-06-21 06:40:44] total 871944
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:29 pilot3.tar.gz
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:37 queuedata.json
[2024-06-21 06:40:44] -rwx------ 1 boinc boinc     32308 Jun 20 16:39 runpilot2-wrapper.sh
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc       100 Jun 21 02:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 06:40:44] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 02:14 run_atlas
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc       105 Jun 21 02:14 job.xml
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc      6661 Jun 21 02:14 init_data.xml
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc 614527107 Jun 21 02:14 EVNT.40024047._000023.pool.root.1
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:14 start_atlas.sh
[2024-06-21 06:40:44] drwxrwx--x 2 boinc boinc      4096 Jun 21 02:14 shared
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc    482485 Jun 21 02:14 input.tar.gz
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc         0 Jun 21 02:14 boinc_lockfile
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc      2502 Jun 21 02:14 pandaJob.out
[2024-06-21 06:40:44] -rw------- 1 boinc boinc       424 Jun 21 02:14 setup.sh.local
[2024-06-21 06:40:44] -rw------- 1 boinc boinc   1024126 Jun 21 02:15 agis_schedconf.cvmfs.json
[2024-06-21 06:40:44] -rw------- 1 boinc boinc   1321251 Jun 21 02:15 cric_ddmendpoints.json
[2024-06-21 06:40:44] drwx------ 4 boinc boinc      4096 Jun 21 02:15 pilot3
[2024-06-21 06:40:44] -rw------- 1 boinc boinc 270909286 Jun 21 06:39 HITS.40024049._000304.pool.root.1
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc       532 Jun 21 06:39 boinc_task_state.xml
[2024-06-21 06:40:44] -rw------- 1 boinc boinc        95 Jun 21 06:39 pilot_heartbeat.json
[2024-06-21 06:40:44] -rw------- 1 boinc boinc      1060 Jun 21 06:40 memory_monitor_summary.json
[2024-06-21 06:40:44] -rw------- 1 boinc boinc         0 Jun 21 06:40 agis_ddmendpoints.agis.ALL.json
[2024-06-21 06:40:44] -rw------- 1 boinc boinc    345476 Jun 21 06:40 log.40024049._000304.job.log.tgz.1
[2024-06-21 06:40:44] -rw------- 1 boinc boinc      7763 Jun 21 06:40 heartbeat.json
[2024-06-21 06:40:44] -rw------- 1 boinc boinc      4416 Jun 21 06:40 pilotlog.txt
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc      8192 Jun 21 06:40 boinc_mmap_file
[2024-06-21 06:40:44] -rw------- 1 boinc boinc   1604189 Jun 21 06:40 log.40024049._000304.job.log.1
[2024-06-21 06:40:44] -rw------- 1 boinc boinc       357 Jun 21 06:40 output.list
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc       620 Jun 21 06:40 runtime_log
[2024-06-21 06:40:44] -rw------- 1 boinc boinc   1966080 Jun 21 06:40 result.tar.gz
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc     11410 Jun 21 06:40 runtime_log.err
[2024-06-21 06:40:44] -rw------- 1 boinc boinc       659 Jun 21 06:40 ju7NDmm7Xe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm6FlKDmrurwhm.diag
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc        28 Jun 21 06:40 wrapper_checkpoint.txt
[2024-06-21 06:40:44] -rw-r--r-- 1 boinc boinc     21373 Jun 21 06:40 stderr.txt
[2024-06-21 06:40:44] HITS file was successfully produced:
[2024-06-21 06:40:44] -rw------- 1 boinc boinc 270909286 Jun 21 06:39 shared/HITS.pool.root.1
[2024-06-21 06:40:44]  *** Contents of shared directory: ***
[2024-06-21 06:40:44] total 867108
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc 614527107 Jun 21 02:14 ATLAS.root_0
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc     17537 Jun 21 02:14 start_atlas.sh
[2024-06-21 06:40:44] -rw-r--r-- 2 boinc boinc    482485 Jun 21 02:14 input.tar.gz
[2024-06-21 06:40:44] -rw------- 1 boinc boinc 270909286 Jun 21 06:39 HITS.pool.root.1
[2024-06-21 06:40:44] -rw------- 1 boinc boinc   1966080 Jun 21 06:40 result.tar.gz
06:40:46 (1492889): run_atlas exited; CPU time 60001.225968
06:40:46 (1492889): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN