Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:32 (2082232): wrapper (7.7.26015): starting
11:16:32 (2082232): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 11:16:32] Arguments: --nthreads 4
[2024-06-21 11:16:32] Threads: 4
[2024-06-21 11:16:32] Checking for CVMFS
[2024-06-21 11:16:32] No cvmfs_config command found, will try listing directly
[2024-06-21 11:16:32] CVMFS is ok
[2024-06-21 11:16:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 11:16:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 11:16:32] Further information can be found at the LHC@home message board.
[2024-06-21 11:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 11:16:32] Checking for apptainer binary...
[2024-06-21 11:16:32] which: no apptainer in ((null))
[2024-06-21 11:16:32] apptainer is not installed, using version from CVMFS
[2024-06-21 11:16:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 11:16:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-21 11:16:33] apptainer works
[2024-06-21 11:16:33] Set ATHENA_PROC_NUMBER=4
[2024-06-21 11:16:33] Set ATHENA_CORE_NUMBER=4
[2024-06-21 11:16:33] Starting ATLAS job with PandaID=6238873588
[2024-06-21 11:16:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 14:49:48]  *** The last 200 lines of the pilot log: ***
[2024-06-21 14:49:48] 2024-06-21 12:49:32,468 | INFO     | right removable region: 203
[2024-06-21 14:49:48] 2024-06-21 12:49:32,468 | INFO     | model: linear, x: [1718961738.0, 1718961799.0, 1718961860.0, 1718961921.0, 1718961982.0, 1718962043.0, 1718962104.0, 1718962165.0, 1718962226.0, 1718962287.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,468 | INFO     | sum of square deviations: 2632440055.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,469 | INFO     | sum of deviations: 49632462028.50001
[2024-06-21 14:49:48] 2024-06-21 12:49:32,469 | INFO     | mean x: 1718967929.5
[2024-06-21 14:49:48] 2024-06-21 12:49:32,469 | INFO     | mean y: 2331284.43627451
[2024-06-21 14:49:48] 2024-06-21 12:49:32,469 | INFO     | -- intersect: -32407375567.98359
[2024-06-21 14:49:48] 2024-06-21 12:49:32,469 | INFO     | intersect: -32407375567.98359
[2024-06-21 14:49:48] 2024-06-21 12:49:32,470 | INFO     | chi2: 1.6456577574666427
[2024-06-21 14:49:48] 2024-06-21 12:49:32,470 | INFO     | current chi2=1.6456577574666427 (change=60.29087883628262 %)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,470 | INFO     | model: linear, x: [1718962043.0, 1718962104.0, 1718962165.0, 1718962226.0, 1718962287.0, 1718962348.0, 1718962409.0, 1718962470.0, 1718962531.0, 1718962592.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,470 | INFO     | sum of square deviations: 2443580700.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,471 | INFO     | sum of deviations: 9079917649.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,471 | INFO     | mean x: 1718968082.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,471 | INFO     | mean y: 2364033.824120603
[2024-06-21 14:49:48] 2024-06-21 12:49:32,471 | INFO     | -- intersect: -6385020113.472295
[2024-06-21 14:49:48] 2024-06-21 12:49:32,472 | INFO     | intersect: -6385020113.472295
[2024-06-21 14:49:48] 2024-06-21 12:49:32,472 | INFO     | chi2: 0.06066269068553488
[2024-06-21 14:49:48] 2024-06-21 12:49:32,472 | INFO     | current chi2=0.06066269068553488 (change=96.31377238612964 %)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,472 | INFO     | model: linear, x: [1718962348.0, 1718962409.0, 1718962470.0, 1718962531.0, 1718962592.0, 1718962653.0, 1718962714.0, 1718962775.0, 1718962836.0, 1718962897.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,472 | INFO     | sum of square deviations: 2263977332.5
[2024-06-21 14:49:48] 2024-06-21 12:49:32,473 | INFO     | sum of deviations: 2850771834.5000005
[2024-06-21 14:49:48] 2024-06-21 12:49:32,473 | INFO     | mean x: 1718968234.5
[2024-06-21 14:49:48] 2024-06-21 12:49:32,473 | INFO     | mean y: 2369267.2216494847
[2024-06-21 14:49:48] 2024-06-21 12:49:32,473 | INFO     | -- intersect: -2162133953.268431
[2024-06-21 14:49:48] 2024-06-21 12:49:32,474 | INFO     | intersect: -2162133953.268431
[2024-06-21 14:49:48] 2024-06-21 12:49:32,474 | INFO     | chi2: 0.0010514427188977
[2024-06-21 14:49:48] 2024-06-21 12:49:32,474 | INFO     | current chi2=0.0010514427188977 (change=98.26673906644167 %)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,474 | INFO     | model: linear, x: [1718962653.0, 1718962714.0, 1718962775.0, 1718962836.0, 1718962897.0, 1718962958.0, 1718963019.0, 1718963080.0, 1718963141.0, 1718963202.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,474 | INFO     | sum of square deviations: 2093397390.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,475 | INFO     | sum of deviations: 1963507344.9999998
[2024-06-21 14:49:48] 2024-06-21 12:49:32,475 | INFO     | mean x: 1718968387.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,475 | INFO     | mean y: 2370058.2592592593
[2024-06-21 14:49:48] 2024-06-21 12:49:32,475 | INFO     | -- intersect: -1609940662.0179367
[2024-06-21 14:49:48] 2024-06-21 12:49:32,475 | INFO     | intersect: -1609940662.0179367
[2024-06-21 14:49:48] 2024-06-21 12:49:32,476 | INFO     | chi2: 0.000505543088911684
[2024-06-21 14:49:48] 2024-06-21 12:49:32,476 | INFO     | current chi2=0.000505543088911684 (change=51.919103168864986 %)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,476 | INFO     | model: linear, x: [1718962958.0, 1718963019.0, 1718963080.0, 1718963141.0, 1718963202.0, 1718963263.0, 1718963324.0, 1718963385.0, 1718963446.0, 1718963507.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,476 | INFO     | sum of square deviations: 1931608310.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,477 | INFO     | sum of deviations: 1493704987.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,477 | INFO     | mean x: 1718968539.5
[2024-06-21 14:49:48] 2024-06-21 12:49:32,477 | INFO     | mean y: 2370500.5760869565
[2024-06-21 14:49:48] 2024-06-21 12:49:32,477 | INFO     | -- intersect: -1326901001.650602
[2024-06-21 14:49:48] 2024-06-21 12:49:32,477 | INFO     | intersect: -1326901001.650602
[2024-06-21 14:49:48] 2024-06-21 12:49:32,478 | INFO     | chi2: 0.0003803478268855854
[2024-06-21 14:49:48] 2024-06-21 12:49:32,478 | INFO     | current chi2=0.0003803478268855854 (change=24.764508658523 %)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,478 | INFO     | left removable region: 50
[2024-06-21 14:49:48] 2024-06-21 12:49:32,478 | INFO     | model: linear, x: [1718964483.0, 1718964544.0, 1718964605.0, 1718964666.0, 1718964727.0, 1718964788.0, 1718964849.0, 1718964910.0, 1718964971.0, 1718965032.0, 1718
[2024-06-21 14:49:48] 2024-06-21 12:49:32,478 | INFO     | sum of square deviations: 1110539892.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | sum of deviations: 1293372385.9999998
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | mean x: 1718969119.0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | mean y: 2370097.3921568627
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | -- intersect: -1999599581.425421
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | intersect: -1999599581.425421
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | chi2: 6.941625928954989e-05
[2024-06-21 14:49:48] 2024-06-21 12:49:32,479 | INFO     | -- intersect: -1999599581.425421
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | current memory leak: 1.16 B/s (using 153 data points, chi2=0.00)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | ..............................
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | . Timing measurements:
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | . get job = 0 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | . initial setup = 1 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | . payload setup = 7 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,480 | INFO     | . stage-in = 0 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,481 | INFO     | . payload execution = 12733 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,481 | INFO     | . stage-out = 0 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,481 | INFO     | . log creation = 0 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,481 | INFO     | ..............................
[2024-06-21 14:49:48] 2024-06-21 12:49:32,543 | INFO     | 
[2024-06-21 14:49:48] 2024-06-21 12:49:32,543 | INFO     | job summary report
[2024-06-21 14:49:48] 2024-06-21 12:49:32,543 | INFO     | --------------------------------------------------
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | PanDA job id: 6238873588
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | task id: 40024049
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | errors: (none)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | pilot state: finished 
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | transexitcode: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | exeerrorcode: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | exeerrordiag: 
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | exitcode: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | exitmsg: OK
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | cpuconsumptiontime: 47440 s
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | nevents: 400
[2024-06-21 14:49:48] 2024-06-21 12:49:32,544 | INFO     | neventsw: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | pid: 2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | pgrp: 2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | corecount: 4
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | event service: False
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | sizes: {0: 2386697, 1: 2386896, 6: 2387102, 11: 2387130, 12743: 2416940, 12745: 2426106, 12751: 2426220}
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | --------------------------------------------------
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | 
[2024-06-21 14:49:48] 2024-06-21 12:49:32,545 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 14:49:48] 2024-06-21 12:49:32,643 | WARNING  | process 2094442 is no longer using CPU - aborting
[2024-06-21 14:49:48] 2024-06-21 12:49:32,648 | INFO     | aborting job monitoring since job object (job id=6238873588) has expired
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,666 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 14:49:48] 2024-06-21 12:49:32,667 | INFO     | job 6238873588 has completed (purged errors)
[2024-06-21 14:49:48] 2024-06-21 12:49:32,667 | INFO     | overall cleanup function is called
[2024-06-21 14:49:48] 2024-06-21 12:49:33,286 | INFO     | 12770s have passed since pilot start
[2024-06-21 14:49:48] 2024-06-21 12:49:33,674 | INFO     | --- collectZombieJob: --- 10, [2094442]
[2024-06-21 14:49:48] 2024-06-21 12:49:33,675 | INFO     | zombie collector waiting for pid 2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:33,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 14:49:48] 2024-06-21 12:49:34,680 | INFO     | collected zombie processes
[2024-06-21 14:49:48] 2024-06-21 12:49:34,680 | INFO     | will now attempt to kill all subprocesses of pid=2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:34,879 | INFO     | process IDs to be killed: [2094442] (in reverse order)
[2024-06-21 14:49:48] 2024-06-21 12:49:35,036 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 14:49:48] 2024-06-21 12:49:35,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 14:49:48] 2024-06-21 12:49:35,049 | INFO     | did not find any defunct processes belonging to 2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:35,057 | INFO     | did not find any defunct processes belonging to 2094442
[2024-06-21 14:49:48] 2024-06-21 12:49:35,057 | INFO     | ready for new job
[2024-06-21 14:49:48] 2024-06-21 12:49:35,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 14:49:48] 2024-06-21 12:49:35,059 | INFO     | *************************************
[2024-06-21 14:49:48] 2024-06-21 12:49:35,059 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 14:49:48] 2024-06-21 12:49:35,059 | INFO     | *************************************
[2024-06-21 14:49:48] 2024-06-21 12:49:35,059 | INFO     | 
[2024-06-21 14:49:48] 2024-06-21 12:49:35,063 | INFO     | architecture information:
[2024-06-21 14:49:48] 2024-06-21 12:49:35,064 | INFO     | executing command: cat /etc/os-release
[2024-06-21 14:49:48] 2024-06-21 12:49:35,082 | INFO     | cat /etc/os-release:
[2024-06-21 14:49:48] NAME="CentOS Linux"
[2024-06-21 14:49:48] VERSION="7 (Core)"
[2024-06-21 14:49:48] ID="centos"
[2024-06-21 14:49:48] ID_LIKE="rhel fedora"
[2024-06-21 14:49:48] VERSION_ID="7"
[2024-06-21 14:49:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 14:49:48] ANSI_COLOR="0;31"
[2024-06-21 14:49:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 14:49:48] HOME_URL="https://www.centos.org/"
[2024-06-21 14:49:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 14:49:48] 
[2024-06-21 14:49:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 14:49:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 14:49:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 14:49:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 14:49:48] 
[2024-06-21 14:49:48] 2024-06-21 12:49:35,083 | INFO     | *************************************
[2024-06-21 14:49:48] 2024-06-21 12:49:35,585 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 14:49:48] 2024-06-21 12:49:35,609 | INFO     | sufficient remaining disk space (3152554229760 B)
[2024-06-21 14:49:48] 2024-06-21 12:49:35,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 14:49:48] 2024-06-21 12:49:35,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 14:49:48] 2024-06-21 12:49:36,012 | INFO     | all payload control threads have been joined
[2024-06-21 14:49:48] 2024-06-21 12:49:36,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 14:49:48] 2024-06-21 12:49:36,156 | INFO     | aborting loop
[2024-06-21 14:49:48] 2024-06-21 12:49:36,296 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 14:49:48] 2024-06-21 12:49:36,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 14:49:48] 2024-06-21 12:49:36,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 14:49:48] 2024-06-21 12:49:36,522 | INFO     | all job control threads have been joined
[2024-06-21 14:49:48] 2024-06-21 12:49:36,614 | INFO     | [job] retrieve thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:36,663 | INFO     | [payload] validate_post thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:36,707 | INFO     | all data control threads have been joined
[2024-06-21 14:49:48] 2024-06-21 12:49:36,766 | INFO     | [payload] failed_post thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:36,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 14:49:48] 2024-06-21 12:49:36,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 14:49:48] 2024-06-21 12:49:37,017 | INFO     | [payload] control thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,161 | INFO     | [job] job monitor thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,369 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,514 | INFO     | [job] validate thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,528 | INFO     | [job] control thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 14:49:48] 2024-06-21 12:49:37,586 | INFO     | [data] copytool_in thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,659 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,712 | INFO     | [data] control thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:37,803 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:38,110 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:38,558 | INFO     | [job] queue monitor thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:38,922 | INFO     | [data] copytool_out thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:40,967 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 14:49:48] 2024-06-21 12:49:42,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47564879283264)>', '<ExcThread(monitor, started 47565061658368)>']
[2024-06-21 14:49:48] 2024-06-21 12:49:43,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 14:49:48] 2024-06-21 12:49:43,332 | INFO     | [monitor] control thread has ended
[2024-06-21 14:49:48] 2024-06-21 12:49:47,468 | INFO     | all workflow threads have been joined
[2024-06-21 14:49:48] 2024-06-21 12:49:47,468 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 14:49:48] 2024-06-21 12:49:47,468 | INFO     | traces error code: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:47,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 14:49:48] 2024-06-21 12:49:47,588 [wrapper] ==== pilot stdout END ====
[2024-06-21 14:49:48] 2024-06-21 12:49:47,591 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 14:49:48] 2024-06-21 12:49:47,593 [wrapper] pilotpid: 2086906
[2024-06-21 14:49:48] 2024-06-21 12:49:47,594 [wrapper] Pilot exit status: 0
[2024-06-21 14:49:48] 2024-06-21 12:49:47,619 [wrapper] pandaids: 6238873588
[2024-06-21 14:49:48] 2024-06-21 12:49:47,724 [wrapper] cleanup supervisor_pilot 3113107 2086907
[2024-06-21 14:49:48] 2024-06-21 12:49:47,727 [wrapper] Test setup, not cleaning
[2024-06-21 14:49:48] 2024-06-21 12:49:47,730 [wrapper] ==== wrapper stdout END ====
[2024-06-21 14:49:48] 2024-06-21 12:49:47,734 [wrapper] ==== wrapper stderr END ====
[2024-06-21 14:49:48] 2024-06-21 12:49:47,739 [wrapper] apfmon messages muted
[2024-06-21 14:49:48]  *** Error codes and diagnostics ***
[2024-06-21 14:49:48]     "exeErrorCode": 0,
[2024-06-21 14:49:48]     "exeErrorDiag": "",
[2024-06-21 14:49:48]     "pilotErrorCode": 0,
[2024-06-21 14:49:48]     "pilotErrorDiag": "",
[2024-06-21 14:49:48]  *** Listing of results directory ***
[2024-06-21 14:49:48] total 869528
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:29 pilot3.tar.gz
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:34 queuedata.json
[2024-06-21 14:49:48] -rwx------ 1 boinc boinc     32308 Jun 20 16:36 runpilot2-wrapper.sh
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc       100 Jun 21 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 14:49:48] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 11:16 run_atlas
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc       105 Jun 21 11:16 job.xml
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 11:16 EVNT.40024047._000022.pool.root.1
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:16 start_atlas.sh
[2024-06-21 14:49:48] drwxrwx--x 2 boinc boinc      4096 Jun 21 11:16 shared
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc    482487 Jun 21 11:16 input.tar.gz
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc      6642 Jun 21 11:16 init_data.xml
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc         0 Jun 21 11:16 boinc_lockfile
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc      2502 Jun 21 11:16 pandaJob.out
[2024-06-21 14:49:48] -rw------- 1 boinc boinc       424 Jun 21 11:16 setup.sh.local
[2024-06-21 14:49:48] -rw------- 1 boinc boinc   1023459 Jun 21 11:16 agis_schedconf.cvmfs.json
[2024-06-21 14:49:48] -rw------- 1 boinc boinc   1321251 Jun 21 11:16 cric_ddmendpoints.json
[2024-06-21 14:49:48] drwx------ 4 boinc boinc      4096 Jun 21 11:16 pilot3
[2024-06-21 14:49:48] -rw------- 1 boinc boinc 269828193 Jun 21 14:48 HITS.40024049._000288.pool.root.1
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc       532 Jun 21 14:49 boinc_task_state.xml
[2024-06-21 14:49:48] -rw------- 1 boinc boinc      1042 Jun 21 14:49 memory_monitor_summary.json
[2024-06-21 14:49:48] -rw------- 1 boinc boinc         0 Jun 21 14:49 agis_ddmendpoints.agis.ALL.json
[2024-06-21 14:49:48] -rw------- 1 boinc boinc    323406 Jun 21 14:49 log.40024049._000288.job.log.tgz.1
[2024-06-21 14:49:48] -rw------- 1 boinc boinc        95 Jun 21 14:49 pilot_heartbeat.json
[2024-06-21 14:49:48] -rw------- 1 boinc boinc      7715 Jun 21 14:49 heartbeat.json
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc      8192 Jun 21 14:49 boinc_mmap_file
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc        28 Jun 21 14:49 wrapper_checkpoint.txt
[2024-06-21 14:49:48] -rw------- 1 boinc boinc      4222 Jun 21 14:49 pilotlog.txt
[2024-06-21 14:49:48] -rw------- 1 boinc boinc   1265105 Jun 21 14:49 log.40024049._000288.job.log.1
[2024-06-21 14:49:48] -rw------- 1 boinc boinc       357 Jun 21 14:49 output.list
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc       620 Jun 21 14:49 runtime_log
[2024-06-21 14:49:48] -rw------- 1 boinc boinc   1607680 Jun 21 14:49 result.tar.gz
[2024-06-21 14:49:48] -rw------- 1 boinc boinc       659 Jun 21 14:49 51DODmg4Xe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmqFlKDmzBT38m.diag
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc     11410 Jun 21 14:49 runtime_log.err
[2024-06-21 14:49:48] -rw-r--r-- 1 boinc boinc     21357 Jun 21 14:49 stderr.txt
[2024-06-21 14:49:48] HITS file was successfully produced:
[2024-06-21 14:49:48] -rw------- 1 boinc boinc 269828193 Jun 21 14:48 shared/HITS.pool.root.1
[2024-06-21 14:49:48]  *** Contents of shared directory: ***
[2024-06-21 14:49:48] total 865052
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 11:16 ATLAS.root_0
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:16 start_atlas.sh
[2024-06-21 14:49:48] -rw-r--r-- 2 boinc boinc    482487 Jun 21 11:16 input.tar.gz
[2024-06-21 14:49:48] -rw------- 1 boinc boinc 269828193 Jun 21 14:48 HITS.pool.root.1
[2024-06-21 14:49:48] -rw------- 1 boinc boinc   1607680 Jun 21 14:49 result.tar.gz
14:49:49 (2082232): run_atlas exited; CPU time 46961.267421
14:49:49 (2082232): called boinc_finish(0)

</stderr_txt>
]]>

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