Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:02 (819244): wrapper (7.7.26015): starting
07:38:02 (819244): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 07:38:02] Arguments: --nthreads 4
[2024-06-21 07:38:02] Threads: 4
[2024-06-21 07:38:02] Checking for CVMFS
[2024-06-21 07:38:02] No cvmfs_config command found, will try listing directly
[2024-06-21 07:38:02] CVMFS is ok
[2024-06-21 07:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 07:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 07:38:02] Further information can be found at the LHC@home message board.
[2024-06-21 07:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 07:38:02] Checking for apptainer binary...
[2024-06-21 07:38:02] which: no apptainer in ((null))
[2024-06-21 07:38:02] apptainer is not installed, using version from CVMFS
[2024-06-21 07:38:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 07:38:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-21 07:38:03] apptainer works
[2024-06-21 07:38:03] Set ATHENA_PROC_NUMBER=4
[2024-06-21 07:38:03] Set ATHENA_CORE_NUMBER=4
[2024-06-21 07:38:03] Starting ATLAS job with PandaID=6238873587
[2024-06-21 07:38:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 11:16:20]  *** The last 200 lines of the pilot log: ***
[2024-06-21 11:16:20] 2024-06-21 09:16:04,486 | INFO     | chi2: 4.156396528846715
[2024-06-21 11:16:20] 2024-06-21 09:16:04,486 | INFO     | current chi2=4.156396528846715 (change=0.025596537570802977 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,486 | INFO     | right removable region: 208
[2024-06-21 11:16:20] 2024-06-21 09:16:04,486 | INFO     | model: linear, x: [1718948633.0, 1718948694.0, 1718948755.0, 1718948816.0, 1718948877.0, 1718948938.0, 1718948999.0, 1718949060.0, 1718949121.0, 1718949182.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,486 | INFO     | sum of square deviations: 2830787960.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | sum of deviations: 54510992752.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | mean x: 1718954977.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | mean y: 2326777.0813397127
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | -- intersect: -33098683830.67231
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | intersect: -33098683830.67231
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | chi2: 1.6106227612213568
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | current chi2=1.6106227612213568 (change=61.25945909188925 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | model: linear, x: [1718948938.0, 1718948999.0, 1718949060.0, 1718949121.0, 1718949182.0, 1718949243.0, 1718949304.0, 1718949365.0, 1718949426.0, 1718949487.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,487 | INFO     | sum of square deviations: 2632440055.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | sum of deviations: 13208945734.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | mean x: 1718955129.5
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | mean y: 2358537.117647059
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | -- intersect: -8622941393.87981
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | intersect: -8622941393.87981
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | chi2: 0.0516316840020122
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | current chi2=0.0516316840020122 (change=96.79430309535306 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | model: linear, x: [1718949243.0, 1718949304.0, 1718949365.0, 1718949426.0, 1718949487.0, 1718949548.0, 1718949609.0, 1718949670.0, 1718949731.0, 1718949792.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,488 | INFO     | sum of square deviations: 2443580700.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | sum of deviations: 6900033300.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | mean x: 1718955282.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | mean y: 2363584.030150754
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | -- intersect: -4851516906.600214
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | intersect: -4851516906.600214
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | chi2: 0.0010663841240120438
[2024-06-21 11:16:20] 2024-06-21 09:16:04,489 | INFO     | current chi2=0.0010663841240120438 (change=97.93463230064219 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | model: linear, x: [1718949548.0, 1718949609.0, 1718949670.0, 1718949731.0, 1718949792.0, 1718949853.0, 1718949914.0, 1718949975.0, 1718950036.0, 1718950097.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | sum of square deviations: 2263977332.5
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | sum of deviations: 5811579129.000002
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | mean x: 1718955434.5
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | mean y: 2364505.3608247424
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | -- intersect: -4410155612.846379
[2024-06-21 11:16:20] 2024-06-21 09:16:04,490 | INFO     | intersect: -4410155612.846379
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | chi2: 0.000627006170691001
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | current chi2=0.000627006170691001 (change=41.20259702179141 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | model: linear, x: [1718949853.0, 1718949914.0, 1718949975.0, 1718950036.0, 1718950097.0, 1718950158.0, 1718950219.0, 1718950280.0, 1718950341.0, 1718950402.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | sum of square deviations: 2093397390.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | sum of deviations: 5432135156.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,491 | INFO     | mean x: 1718955587.0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | mean y: 2364842.164021164
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | -- intersect: -4458135166.267401
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | intersect: -4458135166.267401
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | chi2: 0.0005831128198525085
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | current chi2=0.0005831128198525085 (change=7.000465528133357 %)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | left removable region: 50
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | model: linear, x: [1718951378.0, 1718951439.0, 1718951500.0, 1718951561.0, 1718951622.0, 1718951683.0, 1718951744.0, 1718951805.0, 1718951866.0, 1718951927.0, 1718
[2024-06-21 11:16:20] 2024-06-21 09:16:04,492 | INFO     | sum of square deviations: 1223016419.5
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | sum of deviations: 2820842611.499999
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | mean x: 1718956166.5
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | mean y: 2367060.006329114
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | -- intersect: -3962342427.4969063
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | intersect: -3962342427.4969063
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | chi2: 0.0002765437859393897
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | -- intersect: -3962342427.4969063
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | current memory leak: 2.31 B/s (using 158 data points, chi2=0.00)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | ..............................
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | . Timing measurements:
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | . get job = 0 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | . initial setup = 1 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,493 | INFO     | . payload setup = 8 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,494 | INFO     | . stage-in = 0 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,494 | INFO     | . payload execution = 13031 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,494 | INFO     | . stage-out = 0 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,494 | INFO     | . log creation = 0 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,494 | INFO     | ..............................
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | 
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | job summary report
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | --------------------------------------------------
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | PanDA job id: 6238873587
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | task id: 40024049
[2024-06-21 11:16:20] 2024-06-21 09:16:04,548 | INFO     | errors: (none)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | pilot state: finished 
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | transexitcode: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | exeerrorcode: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | exeerrordiag: 
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | exitcode: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | exitmsg: OK
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | cpuconsumptiontime: 48650 s
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | nevents: 400
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | neventsw: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | pid: 843866
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | pgrp: 843866
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | corecount: 4
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | event service: False
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | sizes: {0: 2386697, 1: 2386896, 6: 2387102, 11: 2387130, 13043: 2417051, 13045: 2426033, 13046: 2426217, 13051: 2426387}
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | --------------------------------------------------
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | 
[2024-06-21 11:16:20] 2024-06-21 09:16:04,549 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 11:16:20] 2024-06-21 09:16:04,574 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,574 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,574 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,574 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | job 6238873587 has completed (purged errors)
[2024-06-21 11:16:20] 2024-06-21 09:16:04,576 | INFO     | overall cleanup function is called
[2024-06-21 11:16:20] 2024-06-21 09:16:05,584 | INFO     | --- collectZombieJob: --- 10, [843866]
[2024-06-21 11:16:20] 2024-06-21 09:16:05,584 | INFO     | zombie collector waiting for pid 843866
[2024-06-21 11:16:20] 2024-06-21 09:16:05,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 11:16:20] 2024-06-21 09:16:06,589 | INFO     | collected zombie processes
[2024-06-21 11:16:20] 2024-06-21 09:16:06,590 | INFO     | will now attempt to kill all subprocesses of pid=843866
[2024-06-21 11:16:20] 2024-06-21 09:16:06,772 | INFO     | process IDs to be killed: [843866] (in reverse order)
[2024-06-21 11:16:20] 2024-06-21 09:16:06,927 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 11:16:20] 2024-06-21 09:16:06,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 11:16:20] 2024-06-21 09:16:06,940 | INFO     | did not find any defunct processes belonging to 843866
[2024-06-21 11:16:20] 2024-06-21 09:16:06,949 | INFO     | did not find any defunct processes belonging to 843866
[2024-06-21 11:16:20] 2024-06-21 09:16:06,949 | INFO     | ready for new job
[2024-06-21 11:16:20] 2024-06-21 09:16:06,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 11:16:20] 2024-06-21 09:16:06,951 | INFO     | *************************************
[2024-06-21 11:16:20] 2024-06-21 09:16:06,951 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 11:16:20] 2024-06-21 09:16:06,951 | INFO     | *************************************
[2024-06-21 11:16:20] 2024-06-21 09:16:06,951 | INFO     | 
[2024-06-21 11:16:20] 2024-06-21 09:16:06,955 | INFO     | architecture information:
[2024-06-21 11:16:20] 2024-06-21 09:16:06,955 | INFO     | executing command: cat /etc/os-release
[2024-06-21 11:16:20] 2024-06-21 09:16:06,971 | INFO     | cat /etc/os-release:
[2024-06-21 11:16:20] NAME="CentOS Linux"
[2024-06-21 11:16:20] VERSION="7 (Core)"
[2024-06-21 11:16:20] ID="centos"
[2024-06-21 11:16:20] ID_LIKE="rhel fedora"
[2024-06-21 11:16:20] VERSION_ID="7"
[2024-06-21 11:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 11:16:20] ANSI_COLOR="0;31"
[2024-06-21 11:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 11:16:20] HOME_URL="https://www.centos.org/"
[2024-06-21 11:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 11:16:20] 
[2024-06-21 11:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 11:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 11:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 11:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 11:16:20] 
[2024-06-21 11:16:20] 2024-06-21 09:16:06,971 | INFO     | *************************************
[2024-06-21 11:16:20] 2024-06-21 09:16:07,474 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 11:16:20] 2024-06-21 09:16:07,494 | INFO     | sufficient remaining disk space (3170441887744 B)
[2024-06-21 11:16:20] 2024-06-21 09:16:07,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 11:16:20] 2024-06-21 09:16:07,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 11:16:20] 2024-06-21 09:16:07,495 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 11:16:20] 2024-06-21 09:16:07,495 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 11:16:20] 2024-06-21 09:16:07,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 11:16:20] 2024-06-21 09:16:07,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 11:16:20] 2024-06-21 09:16:07,825 | INFO     | all payload control threads have been joined
[2024-06-21 11:16:20] 2024-06-21 09:16:07,861 | INFO     | all data control threads have been joined
[2024-06-21 11:16:20] 2024-06-21 09:16:07,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:16:20] 2024-06-21 09:16:07,965 | INFO     | aborting loop
[2024-06-21 11:16:20] 2024-06-21 09:16:08,493 | INFO     | all job control threads have been joined
[2024-06-21 11:16:20] 2024-06-21 09:16:08,500 | INFO     | [job] retrieve thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:08,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 11:16:20] 2024-06-21 09:16:08,830 | INFO     | [payload] control thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:08,861 | INFO     | [data] control thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:08,970 | INFO     | [job] job monitor thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,002 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,263 | INFO     | [payload] failed_post thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,478 | INFO     | [job] validate thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,498 | INFO     | [job] control thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 11:16:20] 2024-06-21 09:16:09,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:16:20] 2024-06-21 09:16:09,587 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,713 | INFO     | [data] copytool_in thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,732 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,889 | INFO     | [payload] validate_post thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:09,960 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:10,564 | INFO     | [job] queue monitor thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:10,586 | INFO     | [data] copytool_out thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:13,505 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 11:16:20] 2024-06-21 09:16:14,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47343819433024)>', '<ExcThread(monitor, started 47344001808128)>']
[2024-06-21 11:16:20] 2024-06-21 09:16:14,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 11:16:20] 2024-06-21 09:16:14,525 | INFO     | [monitor] control thread has ended
[2024-06-21 11:16:20] 2024-06-21 09:16:19,211 | INFO     | all workflow threads have been joined
[2024-06-21 11:16:20] 2024-06-21 09:16:19,211 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 11:16:20] 2024-06-21 09:16:19,211 | INFO     | traces error code: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:19,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 11:16:20] 2024-06-21 09:16:19,323 [wrapper] ==== pilot stdout END ====
[2024-06-21 11:16:20] 2024-06-21 09:16:19,326 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 11:16:20] 2024-06-21 09:16:19,327 [wrapper] pilotpid: 826879
[2024-06-21 11:16:20] 2024-06-21 09:16:19,332 [wrapper] Pilot exit status: 0
[2024-06-21 11:16:20] 2024-06-21 09:16:19,342 [wrapper] pandaids: 6238873587
[2024-06-21 11:16:20] 2024-06-21 09:16:19,434 [wrapper] cleanup supervisor_pilot 1972690 826880
[2024-06-21 11:16:20] 2024-06-21 09:16:19,437 [wrapper] Test setup, not cleaning
[2024-06-21 11:16:20] 2024-06-21 09:16:19,438 [wrapper] ==== wrapper stdout END ====
[2024-06-21 11:16:20] 2024-06-21 09:16:19,440 [wrapper] ==== wrapper stderr END ====
[2024-06-21 11:16:20] 2024-06-21 09:16:19,446 [wrapper] apfmon messages muted
[2024-06-21 11:16:20]  *** Error codes and diagnostics ***
[2024-06-21 11:16:20]     "exeErrorCode": 0,
[2024-06-21 11:16:20]     "exeErrorDiag": "",
[2024-06-21 11:16:20]     "pilotErrorCode": 0,
[2024-06-21 11:16:20]     "pilotErrorDiag": "",
[2024-06-21 11:16:20]  *** Listing of results directory ***
[2024-06-21 11:16:20] total 873936
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:29 pilot3.tar.gz
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:34 queuedata.json
[2024-06-21 11:16:20] -rwx------ 1 boinc boinc     32308 Jun 20 16:36 runpilot2-wrapper.sh
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc       100 Jun 21 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 11:16:20] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 07:37 run_atlas
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc       105 Jun 21 07:37 job.xml
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 07:38 EVNT.40024047._000022.pool.root.1
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:38 start_atlas.sh
[2024-06-21 11:16:20] drwxrwx--x 2 boinc boinc      4096 Jun 21 07:38 shared
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc    482485 Jun 21 07:38 input.tar.gz
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc      6642 Jun 21 07:38 init_data.xml
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc         0 Jun 21 07:38 boinc_lockfile
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc      2502 Jun 21 07:38 pandaJob.out
[2024-06-21 11:16:20] -rw------- 1 boinc boinc       424 Jun 21 07:38 setup.sh.local
[2024-06-21 11:16:20] -rw------- 1 boinc boinc   1024115 Jun 21 07:38 agis_schedconf.cvmfs.json
[2024-06-21 11:16:20] -rw------- 1 boinc boinc   1321251 Jun 21 07:38 cric_ddmendpoints.json
[2024-06-21 11:16:20] drwx------ 4 boinc boinc      4096 Jun 21 07:38 pilot3
[2024-06-21 11:16:20] -rw------- 1 boinc boinc 274200371 Jun 21 11:15 HITS.40024049._000287.pool.root.1
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc        28 Jun 21 11:15 wrapper_checkpoint.txt
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc      8192 Jun 21 11:15 boinc_mmap_file
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc       532 Jun 21 11:15 boinc_task_state.xml
[2024-06-21 11:16:20] -rw------- 1 boinc boinc      1036 Jun 21 11:15 memory_monitor_summary.json
[2024-06-21 11:16:20] -rw------- 1 boinc boinc         0 Jun 21 11:15 agis_ddmendpoints.agis.ALL.json
[2024-06-21 11:16:20] -rw------- 1 boinc boinc    329569 Jun 21 11:15 log.40024049._000287.job.log.tgz.1
[2024-06-21 11:16:20] -rw------- 1 boinc boinc      7707 Jun 21 11:16 heartbeat.json
[2024-06-21 11:16:20] -rw------- 1 boinc boinc        95 Jun 21 11:16 pilot_heartbeat.json
[2024-06-21 11:16:20] -rw------- 1 boinc boinc      4345 Jun 21 11:16 pilotlog.txt
[2024-06-21 11:16:20] -rw------- 1 boinc boinc   1325925 Jun 21 11:16 log.40024049._000287.job.log.1
[2024-06-21 11:16:20] -rw------- 1 boinc boinc       357 Jun 21 11:16 output.list
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc       620 Jun 21 11:16 runtime_log
[2024-06-21 11:16:20] -rw------- 1 boinc boinc   1679360 Jun 21 11:16 result.tar.gz
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc     11410 Jun 21 11:16 runtime_log.err
[2024-06-21 11:16:20] -rw------- 1 boinc boinc       659 Jun 21 11:16 KPvNDmg4Xe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmpFlKDmIFRucn.diag
[2024-06-21 11:16:20] -rw-r--r-- 1 boinc boinc     21366 Jun 21 11:16 stderr.txt
[2024-06-21 11:16:20] HITS file was successfully produced:
[2024-06-21 11:16:20] -rw------- 1 boinc boinc 274200371 Jun 21 11:15 shared/HITS.pool.root.1
[2024-06-21 11:16:20]  *** Contents of shared directory: ***
[2024-06-21 11:16:20] total 869388
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 07:38 ATLAS.root_0
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:38 start_atlas.sh
[2024-06-21 11:16:20] -rw-r--r-- 2 boinc boinc    482485 Jun 21 07:38 input.tar.gz
[2024-06-21 11:16:20] -rw------- 1 boinc boinc 274200371 Jun 21 11:15 HITS.pool.root.1
[2024-06-21 11:16:20] -rw------- 1 boinc boinc   1679360 Jun 21 11:16 result.tar.gz
11:16:22 (819244): run_atlas exited; CPU time 48165.255764
11:16:22 (819244): called boinc_finish(0)

</stderr_txt>
]]>

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