Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:01:51 (3436214): wrapper (7.7.26015): starting
16:01:51 (3436214): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 16:01:51] Arguments: --nthreads 4
[2024-06-21 16:01:51] Threads: 4
[2024-06-21 16:01:51] Checking for CVMFS
[2024-06-21 16:01:51] No cvmfs_config command found, will try listing directly
[2024-06-21 16:01:51] CVMFS is ok
[2024-06-21 16:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 16:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 16:01:51] Further information can be found at the LHC@home message board.
[2024-06-21 16:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 16:01:51] Checking for apptainer binary...
[2024-06-21 16:01:51] which: no apptainer in ((null))
[2024-06-21 16:01:51] apptainer is not installed, using version from CVMFS
[2024-06-21 16:01:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 16:01:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 16:01:53] apptainer works
[2024-06-21 16:01:53] Set ATHENA_PROC_NUMBER=4
[2024-06-21 16:01:53] Set ATHENA_CORE_NUMBER=4
[2024-06-21 16:01:53] Starting ATLAS job with PandaID=6238873585
[2024-06-21 16:01:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 20:33:29]  *** The last 200 lines of the pilot log: ***
[2024-06-21 20:33:29] 2024-06-21 18:33:15,557 | INFO     | intersect: -43465762956.53285
[2024-06-21 20:33:29] 2024-06-21 18:33:15,558 | INFO     | chi2: 4.216006525113793
[2024-06-21 20:33:29] 2024-06-21 18:33:15,558 | INFO     | current chi2=4.216006525113793 (change=0.023184108352226878 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,558 | INFO     | right removable region: 260
[2024-06-21 20:33:29] 2024-06-21 18:33:15,558 | INFO     | model: linear, x: [1718978878.0, 1718978939.0, 1718979000.0, 1718979061.0, 1718979122.0, 1718979183.0, 1718979244.0, 1718979305.0, 1718979366.0, 1718979427.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,559 | INFO     | sum of square deviations: 5513070810.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,562 | INFO     | sum of deviations: 79298210199.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,562 | INFO     | mean x: 1718986808.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,563 | INFO     | mean y: 2333182.5670498083
[2024-06-21 20:33:29] 2024-06-21 18:33:15,563 | INFO     | -- intersect: -24723011716.47517
[2024-06-21 20:33:29] 2024-06-21 18:33:15,563 | INFO     | intersect: -24723011716.47517
[2024-06-21 20:33:29] 2024-06-21 18:33:15,563 | INFO     | chi2: 1.6844828546546993
[2024-06-21 20:33:29] 2024-06-21 18:33:15,564 | INFO     | current chi2=1.6844828546546993 (change=60.0547980110385 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,564 | INFO     | model: linear, x: [1718979183.0, 1718979244.0, 1718979305.0, 1718979366.0, 1718979427.0, 1718979488.0, 1718979549.0, 1718979610.0, 1718979671.0, 1718979732.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,564 | INFO     | sum of square deviations: 5202255680.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,568 | INFO     | sum of deviations: 26801892598.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,568 | INFO     | mean x: 1718986960.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,568 | INFO     | mean y: 2358940.91015625
[2024-06-21 20:33:29] 2024-06-21 18:33:15,569 | INFO     | -- intersect: -8853819364.717253
[2024-06-21 20:33:29] 2024-06-21 18:33:15,569 | INFO     | intersect: -8853819364.717253
[2024-06-21 20:33:29] 2024-06-21 18:33:15,569 | INFO     | chi2: 0.09170925418858619
[2024-06-21 20:33:29] 2024-06-21 18:33:15,570 | INFO     | current chi2=0.09170925418858619 (change=94.55564335753446 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,570 | INFO     | model: linear, x: [1718979488.0, 1718979549.0, 1718979610.0, 1718979671.0, 1718979732.0, 1718979793.0, 1718979854.0, 1718979915.0, 1718979976.0, 1718980037.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,570 | INFO     | sum of square deviations: 4903347750.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,574 | INFO     | sum of deviations: 16932725504.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,574 | INFO     | mean x: 1718987113.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,574 | INFO     | mean y: 2363932.940239044
[2024-06-21 20:33:29] 2024-06-21 18:33:15,574 | INFO     | -- intersect: -5933812412.974127
[2024-06-21 20:33:29] 2024-06-21 18:33:15,574 | INFO     | intersect: -5933812412.974127
[2024-06-21 20:33:29] 2024-06-21 18:33:15,575 | INFO     | chi2: 0.003805321228532151
[2024-06-21 20:33:29] 2024-06-21 18:33:15,575 | INFO     | current chi2=0.003805321228532151 (change=95.85066822078055 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,576 | INFO     | model: linear, x: [1718979793.0, 1718979854.0, 1718979915.0, 1718979976.0, 1718980037.0, 1718980098.0, 1718980159.0, 1718980220.0, 1718980281.0, 1718980342.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,576 | INFO     | sum of square deviations: 4616114457.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,579 | INFO     | sum of deviations: 14501749020.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,579 | INFO     | mean x: 1718987265.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,580 | INFO     | mean y: 2365223.6544715445
[2024-06-21 20:33:29] 2024-06-21 18:33:15,580 | INFO     | -- intersect: -5397917226.711221
[2024-06-21 20:33:29] 2024-06-21 18:33:15,580 | INFO     | intersect: -5397917226.711221
[2024-06-21 20:33:29] 2024-06-21 18:33:15,581 | INFO     | chi2: 0.0023141152138884216
[2024-06-21 20:33:29] 2024-06-21 18:33:15,581 | INFO     | current chi2=0.0023141152138884216 (change=39.18738853011211 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,581 | INFO     | model: linear, x: [1718980098.0, 1718980159.0, 1718980220.0, 1718980281.0, 1718980342.0, 1718980403.0, 1718980464.0, 1718980525.0, 1718980586.0, 1718980647.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,581 | INFO     | sum of square deviations: 4340323240.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,585 | INFO     | sum of deviations: 12820914791.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,585 | INFO     | mean x: 1718987418.0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,585 | INFO     | mean y: 2366151.887966805
[2024-06-21 20:33:29] 2024-06-21 18:33:15,585 | INFO     | -- intersect: -5075364236.915771
[2024-06-21 20:33:29] 2024-06-21 18:33:15,585 | INFO     | intersect: -5075364236.915771
[2024-06-21 20:33:29] 2024-06-21 18:33:15,586 | INFO     | chi2: 0.0018271498918073312
[2024-06-21 20:33:29] 2024-06-21 18:33:15,586 | INFO     | current chi2=0.0018271498918073312 (change=21.04326176840779 %)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,586 | INFO     | left removable region: 50
[2024-06-21 20:33:29] 2024-06-21 18:33:15,587 | INFO     | model: linear, x: [1718981623.0, 1718981684.0, 1718981745.0, 1718981806.0, 1718981867.0, 1718981928.0, 1718981989.0, 1718982050.0, 1718982111.0, 1718982172.0, 1718
[2024-06-21 20:33:29] 2024-06-21 18:33:15,587 | INFO     | sum of square deviations: 2871616632.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,589 | INFO     | sum of deviations: 6912616776.499992
[2024-06-21 20:33:29] 2024-06-21 18:33:15,590 | INFO     | mean x: 1718987997.5
[2024-06-21 20:33:29] 2024-06-21 18:33:15,590 | INFO     | mean y: 2369294.557142857
[2024-06-21 20:33:29] 2024-06-21 18:33:15,590 | INFO     | -- intersect: -4135615259.38231
[2024-06-21 20:33:29] 2024-06-21 18:33:15,590 | INFO     | intersect: -4135615259.38231
[2024-06-21 20:33:29] 2024-06-21 18:33:15,590 | INFO     | chi2: 0.0010078729064138929
[2024-06-21 20:33:29] 2024-06-21 18:33:15,591 | INFO     | -- intersect: -4135615259.38231
[2024-06-21 20:33:29] 2024-06-21 18:33:15,591 | INFO     | current memory leak: 2.41 B/s (using 210 data points, chi2=0.00)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | ..............................
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . Timing measurements:
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . get job = 0 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . initial setup = 1 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . payload setup = 14 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . stage-in = 0 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . payload execution = 16218 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . stage-out = 1 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,592 | INFO     | . log creation = 0 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,593 | INFO     | ..............................
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | 
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | job summary report
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | --------------------------------------------------
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | PanDA job id: 6238873585
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | task id: 40024049
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | errors: (none)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | pilot state: finished 
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | transexitcode: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | exeerrorcode: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | exeerrordiag: 
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | exitcode: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | exitmsg: OK
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | cpuconsumptiontime: 61764 s
[2024-06-21 20:33:29] 2024-06-21 18:33:15,713 | INFO     | nevents: 400
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | neventsw: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | pid: 3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | pgrp: 3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | corecount: 4
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | event service: False
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | sizes: {0: 2386697, 1: 2386896, 8: 2387102, 12: 2387130, 16236: 2418535, 16239: 2427701, 16246: 2427815}
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | --------------------------------------------------
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | 
[2024-06-21 20:33:29] 2024-06-21 18:33:15,714 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | job 6238873585 has completed (purged errors)
[2024-06-21 20:33:29] 2024-06-21 18:33:15,733 | INFO     | overall cleanup function is called
[2024-06-21 20:33:29] 2024-06-21 18:33:16,740 | INFO     | --- collectZombieJob: --- 10, [3447852]
[2024-06-21 20:33:29] 2024-06-21 18:33:16,740 | INFO     | zombie collector waiting for pid 3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:16,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 20:33:29] 2024-06-21 18:33:17,745 | INFO     | collected zombie processes
[2024-06-21 20:33:29] 2024-06-21 18:33:17,745 | INFO     | will now attempt to kill all subprocesses of pid=3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:17,960 | INFO     | process IDs to be killed: [3447852] (in reverse order)
[2024-06-21 20:33:29] 2024-06-21 18:33:18,062 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 20:33:29] 2024-06-21 18:33:18,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 20:33:29] 2024-06-21 18:33:18,069 | INFO     | did not find any defunct processes belonging to 3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:18,075 | INFO     | did not find any defunct processes belonging to 3447852
[2024-06-21 20:33:29] 2024-06-21 18:33:18,075 | INFO     | ready for new job
[2024-06-21 20:33:29] 2024-06-21 18:33:18,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 20:33:29] 2024-06-21 18:33:18,077 | INFO     | *************************************
[2024-06-21 20:33:29] 2024-06-21 18:33:18,077 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 20:33:29] 2024-06-21 18:33:18,077 | INFO     | *************************************
[2024-06-21 20:33:29] 2024-06-21 18:33:18,077 | INFO     | 
[2024-06-21 20:33:29] 2024-06-21 18:33:18,080 | INFO     | architecture information:
[2024-06-21 20:33:29] 2024-06-21 18:33:18,080 | INFO     | executing command: cat /etc/os-release
[2024-06-21 20:33:29] 2024-06-21 18:33:18,099 | INFO     | cat /etc/os-release:
[2024-06-21 20:33:29] NAME="CentOS Linux"
[2024-06-21 20:33:29] VERSION="7 (Core)"
[2024-06-21 20:33:29] ID="centos"
[2024-06-21 20:33:29] ID_LIKE="rhel fedora"
[2024-06-21 20:33:29] VERSION_ID="7"
[2024-06-21 20:33:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 20:33:29] ANSI_COLOR="0;31"
[2024-06-21 20:33:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 20:33:29] HOME_URL="https://www.centos.org/"
[2024-06-21 20:33:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 20:33:29] 
[2024-06-21 20:33:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 20:33:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 20:33:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 20:33:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 20:33:29] 
[2024-06-21 20:33:29] 2024-06-21 18:33:18,099 | INFO     | *************************************
[2024-06-21 20:33:29] 2024-06-21 18:33:18,602 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-06-21 20:33:29] 2024-06-21 18:33:18,624 | INFO     | sufficient remaining disk space (662752460800 B)
[2024-06-21 20:33:29] 2024-06-21 18:33:18,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 20:33:29] 2024-06-21 18:33:18,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 20:33:29] 2024-06-21 18:33:18,660 | INFO     | all data control threads have been joined
[2024-06-21 20:33:29] 2024-06-21 18:33:18,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:33:29] 2024-06-21 18:33:18,723 | INFO     | aborting loop
[2024-06-21 20:33:29] 2024-06-21 18:33:19,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 20:33:29] 2024-06-21 18:33:19,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 20:33:29] 2024-06-21 18:33:19,235 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 20:33:29] 2024-06-21 18:33:19,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 20:33:29] 2024-06-21 18:33:19,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 20:33:29] 2024-06-21 18:33:19,277 | INFO     | all job control threads have been joined
[2024-06-21 20:33:29] 2024-06-21 18:33:19,630 | INFO     | [job] retrieve thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:19,665 | INFO     | [data] control thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:19,724 | INFO     | [job] job monitor thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,003 | INFO     | all payload control threads have been joined
[2024-06-21 20:33:29] 2024-06-21 18:33:20,029 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,041 | INFO     | [job] validate thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,147 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,152 | INFO     | [data] copytool_in thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,278 | INFO     | [payload] validate_post thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,282 | INFO     | [job] control thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,433 | INFO     | [payload] failed_post thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,532 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:20,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 20:33:29] 2024-06-21 18:33:20,871 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:21,008 | INFO     | [payload] control thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:21,168 | INFO     | [data] copytool_out thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:21,707 | INFO     | [job] queue monitor thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:23,230 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 20:33:29] 2024-06-21 18:33:23,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47590082298944)>', '<ExcThread(monitor, started 47590336923392)>']
[2024-06-21 20:33:29] 2024-06-21 18:33:24,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 20:33:29] 2024-06-21 18:33:24,261 | INFO     | [monitor] control thread has ended
[2024-06-21 20:33:29] 2024-06-21 18:33:28,742 | INFO     | all workflow threads have been joined
[2024-06-21 20:33:29] 2024-06-21 18:33:28,742 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 20:33:29] 2024-06-21 18:33:28,742 | INFO     | traces error code: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:28,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 20:33:29] 2024-06-21 18:33:28,859 [wrapper] ==== pilot stdout END ====
[2024-06-21 20:33:29] 2024-06-21 18:33:28,861 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 20:33:29] 2024-06-21 18:33:28,864 [wrapper] pilotpid: 3440632
[2024-06-21 20:33:29] 2024-06-21 18:33:28,866 [wrapper] Pilot exit status: 0
[2024-06-21 20:33:29] 2024-06-21 18:33:28,874 [wrapper] pandaids: 6238873585
[2024-06-21 20:33:29] 2024-06-21 18:33:28,938 [wrapper] cleanup supervisor_pilot 4084297 3440633
[2024-06-21 20:33:29] 2024-06-21 18:33:28,940 [wrapper] Test setup, not cleaning
[2024-06-21 20:33:29] 2024-06-21 18:33:28,942 [wrapper] ==== wrapper stdout END ====
[2024-06-21 20:33:29] 2024-06-21 18:33:28,945 [wrapper] ==== wrapper stderr END ====
[2024-06-21 20:33:29] 2024-06-21 18:33:28,949 [wrapper] apfmon messages muted
[2024-06-21 20:33:29]  *** Error codes and diagnostics ***
[2024-06-21 20:33:29]     "exeErrorCode": 0,
[2024-06-21 20:33:29]     "exeErrorDiag": "",
[2024-06-21 20:33:29]     "pilotErrorCode": 0,
[2024-06-21 20:33:29]     "pilotErrorDiag": "",
[2024-06-21 20:33:29]  *** Listing of results directory ***
[2024-06-21 20:33:29] total 876500
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:29 pilot3.tar.gz
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:34 queuedata.json
[2024-06-21 20:33:29] -rwx------ 1 boinc boinc     32308 Jun 20 16:36 runpilot2-wrapper.sh
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc       100 Jun 21 16:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 20:33:29] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 16:01 run_atlas
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc       105 Jun 21 16:01 job.xml
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 16:01 EVNT.40024047._000022.pool.root.1
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc     17537 Jun 21 16:01 start_atlas.sh
[2024-06-21 20:33:29] drwxrwx--x 2 boinc boinc      4096 Jun 21 16:01 shared
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc    482488 Jun 21 16:01 input.tar.gz
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc      6661 Jun 21 16:01 init_data.xml
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc         0 Jun 21 16:01 boinc_lockfile
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc      2502 Jun 21 16:01 pandaJob.out
[2024-06-21 20:33:29] -rw------- 1 boinc boinc       424 Jun 21 16:01 setup.sh.local
[2024-06-21 20:33:29] -rw------- 1 boinc boinc   1023013 Jun 21 16:02 agis_schedconf.cvmfs.json
[2024-06-21 20:33:29] -rw------- 1 boinc boinc   1321251 Jun 21 16:02 cric_ddmendpoints.json
[2024-06-21 20:33:29] drwx------ 4 boinc boinc      4096 Jun 21 16:02 pilot3
[2024-06-21 20:33:29] -rw------- 1 boinc boinc 276082881 Jun 21 20:32 HITS.40024049._000285.pool.root.1
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc       532 Jun 21 20:32 boinc_task_state.xml
[2024-06-21 20:33:29] -rw------- 1 boinc boinc        95 Jun 21 20:33 pilot_heartbeat.json
[2024-06-21 20:33:29] -rw------- 1 boinc boinc      1046 Jun 21 20:33 memory_monitor_summary.json
[2024-06-21 20:33:29] -rw------- 1 boinc boinc         0 Jun 21 20:33 agis_ddmendpoints.agis.ALL.json
[2024-06-21 20:33:29] -rw------- 1 boinc boinc    358532 Jun 21 20:33 log.40024049._000285.job.log.tgz.1
[2024-06-21 20:33:29] -rw------- 1 boinc boinc      7761 Jun 21 20:33 heartbeat.json
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc      8192 Jun 21 20:33 boinc_mmap_file
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc        28 Jun 21 20:33 wrapper_checkpoint.txt
[2024-06-21 20:33:29] -rw------- 1 boinc boinc      4221 Jun 21 20:33 pilotlog.txt
[2024-06-21 20:33:29] -rw------- 1 boinc boinc   1672991 Jun 21 20:33 log.40024049._000285.job.log.1
[2024-06-21 20:33:29] -rw------- 1 boinc boinc       357 Jun 21 20:33 output.list
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc       620 Jun 21 20:33 runtime_log
[2024-06-21 20:33:29] -rw------- 1 boinc boinc   2048000 Jun 21 20:33 result.tar.gz
[2024-06-21 20:33:29] -rw------- 1 boinc boinc       658 Jun 21 20:33 GErNDmg4Xe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmnFlKDmWxNgMo.diag
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc     11410 Jun 21 20:33 runtime_log.err
[2024-06-21 20:33:29] -rw-r--r-- 1 boinc boinc     21300 Jun 21 20:33 stderr.txt
[2024-06-21 20:33:29] HITS file was successfully produced:
[2024-06-21 20:33:29] -rw------- 1 boinc boinc 276082881 Jun 21 20:32 shared/HITS.pool.root.1
[2024-06-21 20:33:29]  *** Contents of shared directory: ***
[2024-06-21 20:33:29] total 871588
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 16:01 ATLAS.root_0
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc     17537 Jun 21 16:01 start_atlas.sh
[2024-06-21 20:33:29] -rw-r--r-- 2 boinc boinc    482488 Jun 21 16:01 input.tar.gz
[2024-06-21 20:33:29] -rw------- 1 boinc boinc 276082881 Jun 21 20:32 HITS.pool.root.1
[2024-06-21 20:33:29] -rw------- 1 boinc boinc   2048000 Jun 21 20:33 result.tar.gz
20:33:31 (3436214): run_atlas exited; CPU time 61496.159714
20:33:31 (3436214): called boinc_finish(0)

</stderr_txt>
]]>

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