Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:33:48 (2826485): wrapper (7.7.26015): starting
11:33:48 (2826485): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 11:33:48] Arguments: --nthreads 4
[2024-06-21 11:33:48] Threads: 4
[2024-06-21 11:33:48] Checking for CVMFS
[2024-06-21 11:33:48] No cvmfs_config command found, will try listing directly
[2024-06-21 11:33:48] CVMFS is ok
[2024-06-21 11:33:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 11:33:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 11:33:48] Further information can be found at the LHC@home message board.
[2024-06-21 11:33:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 11:33:48] Checking for apptainer binary...
[2024-06-21 11:33:48] which: no apptainer in ((null))
[2024-06-21 11:33:48] apptainer is not installed, using version from CVMFS
[2024-06-21 11:33:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 11:33:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 11:33:49] apptainer works
[2024-06-21 11:33:49] Set ATHENA_PROC_NUMBER=4
[2024-06-21 11:33:49] Set ATHENA_CORE_NUMBER=4
[2024-06-21 11:33:49] Starting ATLAS job with PandaID=6238873584
[2024-06-21 11:33:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:01:39]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:01:39] 2024-06-21 14:01:24,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 16:01:39] 2024-06-21 14:01:24,695 | INFO     | fitting pss+swap vs Time
[2024-06-21 16:01:39] 2024-06-21 14:01:24,696 | INFO     | model: linear, x: [1718962470.0, 1718962531.0, 1718962592.0, 1718962653.0, 1718962714.0, 1718962775.0, 1718962836.0, 1718962897.0, 1718962958.0, 1718963019.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,696 | INFO     | sum of square deviations: 5640782972.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,698 | INFO     | sum of deviations: 105664727650.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,698 | INFO     | mean x: 1718970461.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,698 | INFO     | mean y: 2312227.4410646386
[2024-06-21 16:01:39] 2024-06-21 14:01:24,698 | INFO     | -- intersect: -32197924247.099186
[2024-06-21 16:01:39] 2024-06-21 14:01:24,699 | INFO     | intersect: -32197924247.099186
[2024-06-21 16:01:39] 2024-06-21 14:01:24,699 | INFO     | chi2: 4.5839859563031915
[2024-06-21 16:01:39] 2024-06-21 14:01:24,699 | INFO     | model: linear, x: [1718962470.0, 1718962531.0, 1718962592.0, 1718962653.0, 1718962714.0, 1718962775.0, 1718962836.0, 1718962897.0, 1718962958.0, 1718963019.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,700 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 16:01:39] 2024-06-21 14:01:24,702 | INFO     | sum of deviations: 120252010473.99998
[2024-06-21 16:01:39] 2024-06-21 14:01:24,702 | INFO     | mean x: 1718970308.5
[2024-06-21 16:01:39] 2024-06-21 14:01:24,702 | INFO     | mean y: 2319148.8759689922
[2024-06-21 16:01:39] 2024-06-21 14:01:24,702 | INFO     | -- intersect: -38815372325.59945
[2024-06-21 16:01:39] 2024-06-21 14:01:24,702 | INFO     | intersect: -38815372325.59945
[2024-06-21 16:01:39] 2024-06-21 14:01:24,703 | INFO     | chi2: 3.7886700613143622
[2024-06-21 16:01:39] 2024-06-21 14:01:24,703 | INFO     | current chi2=3.7886700613143622 (change=17.349876342776167 %)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,703 | INFO     | right removable region: 257
[2024-06-21 16:01:39] 2024-06-21 14:01:24,703 | INFO     | model: linear, x: [1718962775.0, 1718962836.0, 1718962897.0, 1718962958.0, 1718963019.0, 1718963080.0, 1718963141.0, 1718963202.0, 1718963263.0, 1718963324.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,704 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 16:01:39] 2024-06-21 14:01:24,706 | INFO     | sum of deviations: 46702236779.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,706 | INFO     | mean x: 1718970613.5
[2024-06-21 16:01:39] 2024-06-21 14:01:24,706 | INFO     | mean y: 2340650.6666666665
[2024-06-21 16:01:39] 2024-06-21 14:01:24,706 | INFO     | -- intersect: -15073277070.572298
[2024-06-21 16:01:39] 2024-06-21 14:01:24,706 | INFO     | intersect: -15073277070.572298
[2024-06-21 16:01:39] 2024-06-21 14:01:24,707 | INFO     | chi2: 2.321635948830057
[2024-06-21 16:01:39] 2024-06-21 14:01:24,707 | INFO     | current chi2=2.321635948830057 (change=49.35333635484418 %)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,707 | INFO     | model: linear, x: [1718963080.0, 1718963141.0, 1718963202.0, 1718963263.0, 1718963324.0, 1718963385.0, 1718963446.0, 1718963507.0, 1718963568.0, 1718963629.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,707 | INFO     | sum of square deviations: 5021496942.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,709 | INFO     | sum of deviations: -2260790967.000002
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | mean x: 1718970766.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | mean y: 2365243.723320158
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | -- intersect: 776284579.9685067
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | intersect: 776284579.9685067
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | chi2: 0.9038400933448079
[2024-06-21 16:01:39] 2024-06-21 14:01:24,710 | INFO     | current chi2=0.9038400933448079 (change=61.06882761699652 %)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,711 | INFO     | model: linear, x: [1718963385.0, 1718963446.0, 1718963507.0, 1718963568.0, 1718963629.0, 1718963690.0, 1718963751.0, 1718963812.0, 1718963873.0, 1718963934.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,711 | INFO     | sum of square deviations: 4729621702.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,713 | INFO     | sum of deviations: -9106684967.499998
[2024-06-21 16:01:39] 2024-06-21 14:01:24,713 | INFO     | mean x: 1718970918.5
[2024-06-21 16:01:39] 2024-06-21 14:01:24,713 | INFO     | mean y: 2368775.245967742
[2024-06-21 16:01:39] 2024-06-21 14:01:24,713 | INFO     | -- intersect: 3312174000.567478
[2024-06-21 16:01:39] 2024-06-21 14:01:24,713 | INFO     | intersect: 3312174000.567478
[2024-06-21 16:01:39] 2024-06-21 14:01:24,714 | INFO     | chi2: 0.8352656283415497
[2024-06-21 16:01:39] 2024-06-21 14:01:24,714 | INFO     | current chi2=0.8352656283415497 (change=7.587012958175725 %)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,714 | INFO     | left removable region: 30
[2024-06-21 16:01:39] 2024-06-21 14:01:24,714 | INFO     | model: linear, x: [1718964300.0, 1718964361.0, 1718964422.0, 1718964483.0, 1718964544.0, 1718964605.0, 1718964666.0, 1718964727.0, 1718964788.0, 1718964849.0, 1718
[2024-06-21 16:01:39] 2024-06-21 14:01:24,714 | INFO     | sum of square deviations: 3627000098.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,716 | INFO     | sum of deviations: 9828491410.000006
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | mean x: 1718971193.0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | mean y: 2375391.6563876653
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | -- intersect: -4655714806.288229
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | intersect: -4655714806.288229
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | chi2: 0.0027721396516938025
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | -- intersect: -4655714806.288229
[2024-06-21 16:01:39] 2024-06-21 14:01:24,717 | INFO     | current memory leak: 2.71 B/s (using 227 data points, chi2=0.00)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,718 | INFO     | ..............................
[2024-06-21 16:01:39] 2024-06-21 14:01:24,718 | INFO     | . Timing measurements:
[2024-06-21 16:01:39] 2024-06-21 14:01:24,718 | INFO     | . get job = 0 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,718 | INFO     | . initial setup = 1 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,718 | INFO     | . payload setup = 7 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,719 | INFO     | . stage-in = 0 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,719 | INFO     | . payload execution = 16007 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,719 | INFO     | . stage-out = 1 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,719 | INFO     | . log creation = 0 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,719 | INFO     | ..............................
[2024-06-21 16:01:39] 2024-06-21 14:01:24,823 | INFO     | 
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | job summary report
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | --------------------------------------------------
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | PanDA job id: 6238873584
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | task id: 40024049
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | errors: (none)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | pilot state: finished 
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | transexitcode: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | exeerrorcode: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,824 | INFO     | exeerrordiag: 
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | exitcode: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | exitmsg: OK
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | cpuconsumptiontime: 60989 s
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | nevents: 400
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | neventsw: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | pid: 2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | pgrp: 2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | corecount: 4
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | event service: False
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | sizes: {0: 2386697, 1: 2386896, 5: 2387102, 11: 2387158, 16017: 2418480, 16018: 2418479, 16020: 2427645, 16021: 2427701, 16028: 2427871}
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | --------------------------------------------------
[2024-06-21 16:01:39] 2024-06-21 14:01:24,825 | INFO     | 
[2024-06-21 16:01:39] 2024-06-21 14:01:24,826 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-06-21 16:01:39] 2024-06-21 14:01:24,855 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,855 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,855 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | job 6238873584 has completed (purged errors)
[2024-06-21 16:01:39] 2024-06-21 14:01:24,857 | INFO     | overall cleanup function is called
[2024-06-21 16:01:39] 2024-06-21 14:01:25,865 | INFO     | --- collectZombieJob: --- 10, [2840244]
[2024-06-21 16:01:39] 2024-06-21 14:01:25,865 | INFO     | zombie collector waiting for pid 2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:25,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:01:39] 2024-06-21 14:01:26,870 | INFO     | collected zombie processes
[2024-06-21 16:01:39] 2024-06-21 14:01:26,870 | INFO     | will now attempt to kill all subprocesses of pid=2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:27,066 | INFO     | process IDs to be killed: [2840244] (in reverse order)
[2024-06-21 16:01:39] 2024-06-21 14:01:27,199 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:01:39] 2024-06-21 14:01:27,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:01:39] 2024-06-21 14:01:27,207 | INFO     | did not find any defunct processes belonging to 2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:27,213 | INFO     | did not find any defunct processes belonging to 2840244
[2024-06-21 16:01:39] 2024-06-21 14:01:27,214 | INFO     | ready for new job
[2024-06-21 16:01:39] 2024-06-21 14:01:27,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:01:39] 2024-06-21 14:01:27,216 | INFO     | *************************************
[2024-06-21 16:01:39] 2024-06-21 14:01:27,216 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:01:39] 2024-06-21 14:01:27,216 | INFO     | *************************************
[2024-06-21 16:01:39] 2024-06-21 14:01:27,216 | INFO     | 
[2024-06-21 16:01:39] 2024-06-21 14:01:27,219 | INFO     | architecture information:
[2024-06-21 16:01:39] 2024-06-21 14:01:27,219 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:01:39] 2024-06-21 14:01:27,234 | INFO     | cat /etc/os-release:
[2024-06-21 16:01:39] NAME="CentOS Linux"
[2024-06-21 16:01:39] VERSION="7 (Core)"
[2024-06-21 16:01:39] ID="centos"
[2024-06-21 16:01:39] ID_LIKE="rhel fedora"
[2024-06-21 16:01:39] VERSION_ID="7"
[2024-06-21 16:01:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:01:39] ANSI_COLOR="0;31"
[2024-06-21 16:01:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:01:39] HOME_URL="https://www.centos.org/"
[2024-06-21 16:01:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:01:39] 
[2024-06-21 16:01:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:01:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:01:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:01:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:01:39] 
[2024-06-21 16:01:39] 2024-06-21 14:01:27,235 | INFO     | *************************************
[2024-06-21 16:01:39] 2024-06-21 14:01:27,738 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-06-21 16:01:39] 2024-06-21 14:01:27,767 | INFO     | sufficient remaining disk space (665979977728 B)
[2024-06-21 16:01:39] 2024-06-21 14:01:27,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:01:39] 2024-06-21 14:01:27,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:01:39] 2024-06-21 14:01:27,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:01:39] 2024-06-21 14:01:27,941 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:01:39] 2024-06-21 14:01:27,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:01:39] 2024-06-21 14:01:27,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:01:39] 2024-06-21 14:01:28,003 | INFO     | all data control threads have been joined
[2024-06-21 16:01:39] 2024-06-21 14:01:28,031 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 16:01:39] 2024-06-21 14:01:28,031 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 16:01:39] 2024-06-21 14:01:28,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:01:39] 2024-06-21 14:01:28,031 | INFO     | will abort loop
[2024-06-21 16:01:39] 2024-06-21 14:01:28,622 | INFO     | all payload control threads have been joined
[2024-06-21 16:01:39] 2024-06-21 14:01:28,774 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:28,868 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:28,878 | INFO     | all job control threads have been joined
[2024-06-21 16:01:39] 2024-06-21 14:01:28,882 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:28,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:01:39] 2024-06-21 14:01:29,008 | INFO     | [data] control thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,036 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,097 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,170 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,349 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,392 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,627 | INFO     | [payload] control thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,752 | INFO     | [job] validate thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,774 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:29,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:01:39] 2024-06-21 14:01:29,884 | INFO     | [job] control thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:30,041 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:30,841 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:32,914 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:01:39] 2024-06-21 14:01:32,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47613251097664)>', '<ExcThread(monitor, started 47613439776512)>']
[2024-06-21 16:01:39] 2024-06-21 14:01:33,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:01:39] 2024-06-21 14:01:33,973 | INFO     | [monitor] control thread has ended
[2024-06-21 16:01:39] 2024-06-21 14:01:37,996 | INFO     | all workflow threads have been joined
[2024-06-21 16:01:39] 2024-06-21 14:01:37,996 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:01:39] 2024-06-21 14:01:37,996 | INFO     | traces error code: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:37,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:01:39] 2024-06-21 14:01:38,128 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:01:39] 2024-06-21 14:01:38,134 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:01:39] 2024-06-21 14:01:38,138 [wrapper] pilotpid: 2830859
[2024-06-21 16:01:39] 2024-06-21 14:01:38,141 [wrapper] Pilot exit status: 0
[2024-06-21 16:01:39] 2024-06-21 14:01:38,180 [wrapper] pandaids: 6238873584
[2024-06-21 16:01:39] 2024-06-21 14:01:38,249 [wrapper] cleanup supervisor_pilot 3413970 2830860
[2024-06-21 16:01:39] 2024-06-21 14:01:38,258 [wrapper] Test setup, not cleaning
[2024-06-21 16:01:39] 2024-06-21 14:01:38,261 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:01:39] 2024-06-21 14:01:38,263 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:01:39] 2024-06-21 14:01:38,267 [wrapper] apfmon messages muted
[2024-06-21 16:01:39]  *** Error codes and diagnostics ***
[2024-06-21 16:01:39]     "exeErrorCode": 0,
[2024-06-21 16:01:39]     "exeErrorDiag": "",
[2024-06-21 16:01:39]     "pilotErrorCode": 0,
[2024-06-21 16:01:39]     "pilotErrorDiag": "",
[2024-06-21 16:01:39]  *** Listing of results directory ***
[2024-06-21 16:01:39] total 871560
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:29 pilot3.tar.gz
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:34 queuedata.json
[2024-06-21 16:01:39] -rwx------ 1 boinc boinc     32308 Jun 20 16:36 runpilot2-wrapper.sh
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc       100 Jun 21 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:01:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 11:33 run_atlas
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc       105 Jun 21 11:33 job.xml
[2024-06-21 16:01:39] drwxrwx--x 2 boinc boinc      4096 Jun 21 11:33 shared
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc    482485 Jun 21 11:33 input.tar.gz
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc      6661 Jun 21 11:33 init_data.xml
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 11:33 EVNT.40024047._000022.pool.root.1
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:33 start_atlas.sh
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc         0 Jun 21 11:33 boinc_lockfile
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc      2502 Jun 21 11:33 pandaJob.out
[2024-06-21 16:01:39] -rw------- 1 boinc boinc       424 Jun 21 11:33 setup.sh.local
[2024-06-21 16:01:39] -rw------- 1 boinc boinc   1023162 Jun 21 11:33 agis_schedconf.cvmfs.json
[2024-06-21 16:01:39] -rw------- 1 boinc boinc   1321251 Jun 21 11:33 cric_ddmendpoints.json
[2024-06-21 16:01:39] drwx------ 4 boinc boinc      4096 Jun 21 11:34 pilot3
[2024-06-21 16:01:39] -rw------- 1 boinc boinc 271165740 Jun 21 16:00 HITS.40024049._000284.pool.root.1
[2024-06-21 16:01:39] -rw------- 1 boinc boinc        95 Jun 21 16:00 pilot_heartbeat.json
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc       532 Jun 21 16:00 boinc_task_state.xml
[2024-06-21 16:01:39] -rw------- 1 boinc boinc      1047 Jun 21 16:01 memory_monitor_summary.json
[2024-06-21 16:01:39] -rw------- 1 boinc boinc         0 Jun 21 16:01 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:01:39] -rw------- 1 boinc boinc    353457 Jun 21 16:01 log.40024049._000284.job.log.tgz.1
[2024-06-21 16:01:39] -rw------- 1 boinc boinc      7757 Jun 21 16:01 heartbeat.json
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:01 boinc_mmap_file
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc        28 Jun 21 16:01 wrapper_checkpoint.txt
[2024-06-21 16:01:39] -rw------- 1 boinc boinc      4407 Jun 21 16:01 pilotlog.txt
[2024-06-21 16:01:39] -rw------- 1 boinc boinc   1606792 Jun 21 16:01 log.40024049._000284.job.log.1
[2024-06-21 16:01:39] -rw------- 1 boinc boinc       357 Jun 21 16:01 output.list
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:01 runtime_log
[2024-06-21 16:01:39] -rw------- 1 boinc boinc   1976320 Jun 21 16:01 result.tar.gz
[2024-06-21 16:01:39] -rw------- 1 boinc boinc       659 Jun 21 16:01 gHpNDmg4Xe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmFlKDm5rbGBn.diag
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:01 runtime_log.err
[2024-06-21 16:01:39] -rw-r--r-- 1 boinc boinc     21336 Jun 21 16:01 stderr.txt
[2024-06-21 16:01:39] HITS file was successfully produced:
[2024-06-21 16:01:39] -rw------- 1 boinc boinc 271165740 Jun 21 16:00 shared/HITS.pool.root.1
[2024-06-21 16:01:39]  *** Contents of shared directory: ***
[2024-06-21 16:01:39] total 866716
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc    482485 Jun 21 11:33 input.tar.gz
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc 613858340 Jun 21 11:33 ATLAS.root_0
[2024-06-21 16:01:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:33 start_atlas.sh
[2024-06-21 16:01:39] -rw------- 1 boinc boinc 271165740 Jun 21 16:00 HITS.pool.root.1
[2024-06-21 16:01:39] -rw------- 1 boinc boinc   1976320 Jun 21 16:01 result.tar.gz
16:01:40 (2826485): run_atlas exited; CPU time 60713.250293
16:01:40 (2826485): called boinc_finish(0)

</stderr_txt>
]]>

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