Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:59 (1235824): wrapper (7.7.26015): starting
09:35:59 (1235824): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 09:35:59] Arguments: --nthreads 4
[2024-06-21 09:35:59] Threads: 4
[2024-06-21 09:35:59] Checking for CVMFS
[2024-06-21 09:35:59] No cvmfs_config command found, will try listing directly
[2024-06-21 09:35:59] CVMFS is ok
[2024-06-21 09:35:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 09:35:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 09:35:59] Further information can be found at the LHC@home message board.
[2024-06-21 09:35:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 09:35:59] Checking for apptainer binary...
[2024-06-21 09:35:59] which: no apptainer in ((null))
[2024-06-21 09:35:59] apptainer is not installed, using version from CVMFS
[2024-06-21 09:35:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 09:36:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-21 09:36:00] apptainer works
[2024-06-21 09:36:00] Set ATHENA_PROC_NUMBER=4
[2024-06-21 09:36:00] Set ATHENA_CORE_NUMBER=4
[2024-06-21 09:36:00] Starting ATLAS job with PandaID=6238862470
[2024-06-21 09:36:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:21:40]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:21:40] 2024-06-21 14:21:26,378 | INFO     | chi2: 4.254087053807206
[2024-06-21 16:21:40] 2024-06-21 14:21:26,378 | INFO     | current chi2=4.254087053807206 (change=0.0028721130308913623 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,378 | INFO     | right removable region: 392
[2024-06-21 16:21:40] 2024-06-21 14:21:26,378 | INFO     | model: linear, x: [1718955700.0, 1718955761.0, 1718955822.0, 1718955883.0, 1718955944.0, 1718956005.0, 1718956066.0, 1718956127.0, 1718956188.0, 1718956249.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,379 | INFO     | sum of square deviations: 18821458012.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,382 | INFO     | sum of deviations: 128359410918.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | mean x: 1718967656.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | mean y: 2357567.4020356233
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | -- intersect: -11720734000.242626
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | intersect: -11720734000.242626
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | chi2: 1.691370881835861
[2024-06-21 16:21:40] 2024-06-21 14:21:26,383 | INFO     | current chi2=1.691370881835861 (change=60.242414356831034 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,384 | INFO     | model: linear, x: [1718956005.0, 1718956066.0, 1718956127.0, 1718956188.0, 1718956249.0, 1718956310.0, 1718956371.0, 1718956432.0, 1718956493.0, 1718956554.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,384 | INFO     | sum of square deviations: 18112179597.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | sum of deviations: 48442015888.00001
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | mean x: 1718967808.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | mean y: 2374750.469072165
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | -- intersect: -4595098758.688819
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | intersect: -4595098758.688819
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | chi2: 0.09720843254915669
[2024-06-21 16:21:40] 2024-06-21 14:21:26,388 | INFO     | current chi2=0.09720843254915669 (change=94.25268380855393 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,389 | INFO     | model: linear, x: [1718956310.0, 1718956371.0, 1718956432.0, 1718956493.0, 1718956554.0, 1718956615.0, 1718956676.0, 1718956737.0, 1718956798.0, 1718956859.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,389 | INFO     | sum of square deviations: 17420948032.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | sum of deviations: 32441632440.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | mean x: 1718967961.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | mean y: 2378262.436031332
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | -- intersect: -3198717720.656461
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | intersect: -3198717720.656461
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | chi2: 0.0031131341756528976
[2024-06-21 16:21:40] 2024-06-21 14:21:26,391 | INFO     | current chi2=0.0031131341756528976 (change=96.79746489680447 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,392 | INFO     | model: linear, x: [1718956615.0, 1718956676.0, 1718956737.0, 1718956798.0, 1718956859.0, 1718956920.0, 1718956981.0, 1718957042.0, 1718957103.0, 1718957164.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,392 | INFO     | sum of square deviations: 16747530754.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | sum of deviations: 29131027233.499996
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | mean x: 1718968113.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | mean y: 2379011.505291005
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | -- intersect: -2987632331.774766
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | intersect: -2987632331.774766
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | chi2: 0.001889183133552917
[2024-06-21 16:21:40] 2024-06-21 14:21:26,394 | INFO     | current chi2=0.001889183133552917 (change=39.31571763505147 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,395 | INFO     | model: linear, x: [1718956920.0, 1718956981.0, 1718957042.0, 1718957103.0, 1718957164.0, 1718957225.0, 1718957286.0, 1718957347.0, 1718957408.0, 1718957469.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,395 | INFO     | sum of square deviations: 16091695202.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | sum of deviations: 26810518761.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | mean x: 1718968266.0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | mean y: 2379550.36997319
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | -- intersect: -2861609008.115068
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | intersect: -2861609008.115068
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | chi2: 0.0014439868294628313
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | current chi2=0.0014439868294628313 (change=23.565545138698198 %)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,397 | INFO     | left removable region: 50
[2024-06-21 16:21:40] 2024-06-21 14:21:26,398 | INFO     | model: linear, x: [1718958445.0, 1718958506.0, 1718958567.0, 1718958628.0, 1718958689.0, 1718958750.0, 1718958811.0, 1718958872.0, 1718958933.0, 1718958994.0, 1718
[2024-06-21 16:21:40] 2024-06-21 14:21:26,398 | INFO     | sum of square deviations: 12403750705.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,399 | INFO     | sum of deviations: 20358092999.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,399 | INFO     | mean x: 1718968845.5
[2024-06-21 16:21:40] 2024-06-21 14:21:26,399 | INFO     | mean y: 2380845.99122807
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | -- intersect: -2818937354.512019
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | intersect: -2818937354.512019
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | chi2: 0.0009284150524776787
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | -- intersect: -2818937354.512019
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | current memory leak: 1.64 B/s (using 342 data points, chi2=0.00)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | ..............................
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | . Timing measurements:
[2024-06-21 16:21:40] 2024-06-21 14:21:26,400 | INFO     | . get job = 0 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . initial setup = 1 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . payload setup = 5 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . stage-in = 0 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . payload execution = 24277 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . stage-out = 1 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | . log creation = 0 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,401 | INFO     | ..............................
[2024-06-21 16:21:40] 2024-06-21 14:21:26,467 | INFO     | 
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | job summary report
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | --------------------------------------------------
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | PanDA job id: 6238862470
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | task id: 38920987
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | errors: (none)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | pilot state: finished 
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | transexitcode: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | exeerrorcode: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | exeerrordiag: 
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | exitcode: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,468 | INFO     | exitmsg: OK
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | cpuconsumptiontime: 93369 s
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | nevents: 400
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | neventsw: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | pid: 1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | pgrp: 1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | corecount: 4
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | event service: False
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | sizes: {0: 2386936, 5: 2387142, 11: 2387198, 24286: 2422078, 24287: 2422077, 24288: 2431115, 24289: 2431299, 24301: 2431469}
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | --------------------------------------------------
[2024-06-21 16:21:40] 2024-06-21 14:21:26,469 | INFO     | 
[2024-06-21 16:21:40] 2024-06-21 14:21:26,470 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2024-06-21 16:21:40] 2024-06-21 14:21:26,512 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | job 6238862470 has completed (purged errors)
[2024-06-21 16:21:40] 2024-06-21 14:21:26,514 | INFO     | overall cleanup function is called
[2024-06-21 16:21:40] 2024-06-21 14:21:27,521 | INFO     | --- collectZombieJob: --- 10, [1254958]
[2024-06-21 16:21:40] 2024-06-21 14:21:27,522 | INFO     | zombie collector waiting for pid 1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:27,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:21:40] 2024-06-21 14:21:28,526 | INFO     | collected zombie processes
[2024-06-21 16:21:40] 2024-06-21 14:21:28,527 | INFO     | will now attempt to kill all subprocesses of pid=1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:28,847 | INFO     | process IDs to be killed: [1254958] (in reverse order)
[2024-06-21 16:21:40] 2024-06-21 14:21:29,073 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:21:40] 2024-06-21 14:21:29,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:21:40] 2024-06-21 14:21:29,092 | INFO     | did not find any defunct processes belonging to 1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:29,106 | INFO     | did not find any defunct processes belonging to 1254958
[2024-06-21 16:21:40] 2024-06-21 14:21:29,107 | INFO     | ready for new job
[2024-06-21 16:21:40] 2024-06-21 14:21:29,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:21:40] 2024-06-21 14:21:29,109 | INFO     | *************************************
[2024-06-21 16:21:40] 2024-06-21 14:21:29,109 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:21:40] 2024-06-21 14:21:29,110 | INFO     | *************************************
[2024-06-21 16:21:40] 2024-06-21 14:21:29,110 | INFO     | 
[2024-06-21 16:21:40] 2024-06-21 14:21:29,116 | INFO     | architecture information:
[2024-06-21 16:21:40] 2024-06-21 14:21:29,117 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:21:40] 2024-06-21 14:21:29,134 | INFO     | cat /etc/os-release:
[2024-06-21 16:21:40] NAME="CentOS Linux"
[2024-06-21 16:21:40] VERSION="7 (Core)"
[2024-06-21 16:21:40] ID="centos"
[2024-06-21 16:21:40] ID_LIKE="rhel fedora"
[2024-06-21 16:21:40] VERSION_ID="7"
[2024-06-21 16:21:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:21:40] ANSI_COLOR="0;31"
[2024-06-21 16:21:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:21:40] HOME_URL="https://www.centos.org/"
[2024-06-21 16:21:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:21:40] 
[2024-06-21 16:21:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:21:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:21:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:21:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:21:40] 
[2024-06-21 16:21:40] 2024-06-21 14:21:29,135 | INFO     | *************************************
[2024-06-21 16:21:40] 2024-06-21 14:21:29,638 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2024-06-21 16:21:40] 2024-06-21 14:21:29,663 | INFO     | sufficient remaining disk space (3146438934528 B)
[2024-06-21 16:21:40] 2024-06-21 14:21:29,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:21:40] 2024-06-21 14:21:29,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:21:40] 2024-06-21 14:21:29,664 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 16:21:40] 2024-06-21 14:21:29,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:21:40] 2024-06-21 14:21:29,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:21:40] 2024-06-21 14:21:29,665 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:21:40] 2024-06-21 14:21:29,666 | INFO     | aborting loop
[2024-06-21 16:21:40] 2024-06-21 14:21:29,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:21:40] 2024-06-21 14:21:29,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:21:40] 2024-06-21 14:21:29,891 | INFO     | all payload control threads have been joined
[2024-06-21 16:21:40] 2024-06-21 14:21:30,007 | INFO     | all job control threads have been joined
[2024-06-21 16:21:40] 2024-06-21 14:21:30,453 | INFO     | all data control threads have been joined
[2024-06-21 16:21:40] 2024-06-21 14:21:30,669 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:30,672 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:30,897 | INFO     | [payload] control thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,012 | INFO     | [job] control thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:21:40] 2024-06-21 14:21:31,198 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,350 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,459 | INFO     | [data] control thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,465 | INFO     | [job] validate thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:21:40] 2024-06-21 14:21:31,624 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,792 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:31,966 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:32,004 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:32,141 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:32,481 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:33,168 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:33,670 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:21:40] 2024-06-21 14:21:34,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47584654107712)>', '<ExcThread(monitor, started 47584836482816)>']
[2024-06-21 16:21:40] 2024-06-21 14:21:34,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:21:40] 2024-06-21 14:21:34,692 | INFO     | [monitor] control thread has ended
[2024-06-21 16:21:40] 2024-06-21 14:21:39,551 | INFO     | all workflow threads have been joined
[2024-06-21 16:21:40] 2024-06-21 14:21:39,552 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:21:40] 2024-06-21 14:21:39,552 | INFO     | traces error code: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:39,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:21:40] 2024-06-21 14:21:39,682 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:21:40] 2024-06-21 14:21:39,685 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:21:40] 2024-06-21 14:21:39,693 [wrapper] pilotpid: 1240591
[2024-06-21 16:21:40] 2024-06-21 14:21:39,695 [wrapper] Pilot exit status: 0
[2024-06-21 16:21:40] 2024-06-21 14:21:39,766 [wrapper] pandaids: 6238862470
[2024-06-21 16:21:40] 2024-06-21 14:21:39,887 [wrapper] cleanup supervisor_pilot 3101980 1240592
[2024-06-21 16:21:40] 2024-06-21 14:21:39,890 [wrapper] Test setup, not cleaning
[2024-06-21 16:21:40] 2024-06-21 14:21:39,892 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:21:40] 2024-06-21 14:21:39,894 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:21:40] 2024-06-21 14:21:39,898 [wrapper] apfmon messages muted
[2024-06-21 16:21:40]  *** Error codes and diagnostics ***
[2024-06-21 16:21:40]     "exeErrorCode": 0,
[2024-06-21 16:21:40]     "exeErrorDiag": "",
[2024-06-21 16:21:40]     "pilotErrorCode": 0,
[2024-06-21 16:21:40]     "pilotErrorDiag": "",
[2024-06-21 16:21:40]  *** Listing of results directory ***
[2024-06-21 16:21:40] total 963988
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc    469766 Jun 20 16:05 pilot3.tar.gz
[2024-06-21 16:21:40] -rwx------ 1 boinc boinc     32308 Jun 20 16:08 runpilot2-wrapper.sh
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc      5654 Jun 20 16:08 queuedata.json
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc       100 Jun 21 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:21:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 09:35 run_atlas
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc       105 Jun 21 09:35 job.xml
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc 638003728 Jun 21 09:35 EVNT.38776170._000771.pool.root.1
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:35 start_atlas.sh
[2024-06-21 16:21:40] drwxrwx--x 2 boinc boinc      4096 Jun 21 09:35 shared
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc    482532 Jun 21 09:35 input.tar.gz
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc      6642 Jun 21 09:35 init_data.xml
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc         0 Jun 21 09:35 boinc_lockfile
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc      2617 Jun 21 09:36 pandaJob.out
[2024-06-21 16:21:40] -rw------- 1 boinc boinc       424 Jun 21 09:36 setup.sh.local
[2024-06-21 16:21:40] -rw------- 1 boinc boinc   1023442 Jun 21 09:36 agis_schedconf.cvmfs.json
[2024-06-21 16:21:40] -rw------- 1 boinc boinc   1321251 Jun 21 09:36 cric_ddmendpoints.json
[2024-06-21 16:21:40] drwx------ 4 boinc boinc      4096 Jun 21 09:36 pilot3
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc       531 Jun 21 16:20 boinc_task_state.xml
[2024-06-21 16:21:40] -rw------- 1 boinc boinc 339236213 Jun 21 16:20 HITS.38920987._059462.pool.root.1
[2024-06-21 16:21:40] -rw------- 1 boinc boinc        95 Jun 21 16:20 pilot_heartbeat.json
[2024-06-21 16:21:40] -rw------- 1 boinc boinc      1043 Jun 21 16:21 memory_monitor_summary.json
[2024-06-21 16:21:40] -rw------- 1 boinc boinc         0 Jun 21 16:21 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:21:40] -rw------- 1 boinc boinc    468413 Jun 21 16:21 log.38920987._059462.job.log.tgz.1
[2024-06-21 16:21:40] -rw------- 1 boinc boinc      7720 Jun 21 16:21 heartbeat.json
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc        28 Jun 21 16:21 wrapper_checkpoint.txt
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:21 boinc_mmap_file
[2024-06-21 16:21:40] -rw------- 1 boinc boinc      4345 Jun 21 16:21 pilotlog.txt
[2024-06-21 16:21:40] -rw------- 1 boinc boinc   2703793 Jun 21 16:21 log.38920987._059462.job.log.1
[2024-06-21 16:21:40] -rw------- 1 boinc boinc       357 Jun 21 16:21 output.list
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:21 runtime_log
[2024-06-21 16:21:40] -rw------- 1 boinc boinc   3194880 Jun 21 16:21 result.tar.gz
[2024-06-21 16:21:40] -rw------- 1 boinc boinc       658 Jun 21 16:21 uGCMDmldXe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmTJXKDm0w9n6m.diag
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:21 runtime_log.err
[2024-06-21 16:21:40] -rw-r--r-- 1 boinc boinc     21393 Jun 21 16:21 stderr.txt
[2024-06-21 16:21:40] HITS file was successfully produced:
[2024-06-21 16:21:40] -rw------- 1 boinc boinc 339236213 Jun 21 16:20 shared/HITS.pool.root.1
[2024-06-21 16:21:40]  *** Contents of shared directory: ***
[2024-06-21 16:21:40] total 957960
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc 638003728 Jun 21 09:35 ATLAS.root_0
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 09:35 start_atlas.sh
[2024-06-21 16:21:40] -rw-r--r-- 2 boinc boinc    482532 Jun 21 09:35 input.tar.gz
[2024-06-21 16:21:40] -rw------- 1 boinc boinc 339236213 Jun 21 16:20 HITS.pool.root.1
[2024-06-21 16:21:40] -rw------- 1 boinc boinc   3194880 Jun 21 16:21 result.tar.gz
16:21:42 (1235824): run_atlas exited; CPU time 92871.589550
16:21:42 (1235824): called boinc_finish(0)

</stderr_txt>
]]>

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