Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:27:40 (311273): wrapper (7.7.26015): starting
17:27:40 (311273): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 17:27:40] Arguments: --nthreads 4
[2024-06-20 17:27:40] Threads: 4
[2024-06-20 17:27:40] Checking for CVMFS
[2024-06-20 17:27:40] No cvmfs_config command found, will try listing directly
[2024-06-20 17:27:40] CVMFS is ok
[2024-06-20 17:27:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 17:27:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 17:27:40] Further information can be found at the LHC@home message board.
[2024-06-20 17:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 17:27:40] Checking for apptainer binary...
[2024-06-20 17:27:40] which: no apptainer in ((null))
[2024-06-20 17:27:40] apptainer is not installed, using version from CVMFS
[2024-06-20 17:27:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 17:27:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-20 17:27:42] apptainer works
[2024-06-20 17:27:42] Set ATHENA_PROC_NUMBER=4
[2024-06-20 17:27:42] Set ATHENA_CORE_NUMBER=4
[2024-06-20 17:27:42] Starting ATLAS job with PandaID=6238851676
[2024-06-20 17:27:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 21:47:46]  *** The last 200 lines of the pilot log: ***
[2024-06-20 21:47:46] 2024-06-20 19:47:32,273 | INFO     | intersect: -47103074422.461784
[2024-06-20 21:47:46] 2024-06-20 19:47:32,274 | INFO     | chi2: 4.544540039941327
[2024-06-20 21:47:46] 2024-06-20 19:47:32,274 | INFO     | model: linear, x: [1718897291.0, 1718897352.0, 1718897413.0, 1718897474.0, 1718897535.0, 1718897596.0, 1718897657.0, 1718897718.0, 1718897779.0, 1718897840.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,274 | INFO     | sum of square deviations: 4844974562.5
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | sum of deviations: 137699201346.50003
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | mean x: 1718904885.5
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | mean y: 2301606.396
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | -- intersect: -48850757758.64934
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | intersect: -48850757758.64934
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | chi2: 4.543777401472328
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | current chi2=4.543777401472328 (change=0.016781422592752053 %)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,275 | INFO     | right removable region: 249
[2024-06-20 21:47:46] 2024-06-20 19:47:32,276 | INFO     | model: linear, x: [1718897596.0, 1718897657.0, 1718897718.0, 1718897779.0, 1718897840.0, 1718897901.0, 1718897962.0, 1718898023.0, 1718898084.0, 1718898145.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,276 | INFO     | sum of square deviations: 4844974562.5
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | sum of deviations: 80240712293.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | mean x: 1718905190.5
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | mean y: 2334380.624
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | -- intersect: -28465550243.043694
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | intersect: -28465550243.043694
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | chi2: 1.9902706626972813
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | current chi2=1.9902706626972813 (change=56.205234298629335 %)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | model: linear, x: [1718897901.0, 1718897962.0, 1718898023.0, 1718898084.0, 1718898145.0, 1718898206.0, 1718898267.0, 1718898328.0, 1718898389.0, 1718898450.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,277 | INFO     | sum of square deviations: 4560048290.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,278 | INFO     | sum of deviations: 30391681995.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,278 | INFO     | mean x: 1718905343.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | mean y: 2361063.4571428574
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | -- intersect: -11453751074.329536
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | intersect: -11453751074.329536
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | chi2: 0.4115402608948196
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | current chi2=0.4115402608948196 (change=79.32239726947056 %)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | model: linear, x: [1718898206.0, 1718898267.0, 1718898328.0, 1718898389.0, 1718898450.0, 1718898511.0, 1718898572.0, 1718898633.0, 1718898694.0, 1718898755.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,279 | INFO     | sum of square deviations: 4286517580.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | sum of deviations: 10653474716.500002
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | mean x: 1718905495.5
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | mean y: 2371969.2625
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | -- intersect: -4269701081.785656
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | intersect: -4269701081.785656
[2024-06-20 21:47:46] 2024-06-20 19:47:32,280 | INFO     | chi2: 0.0010229624501187896
[2024-06-20 21:47:46] 2024-06-20 19:47:32,281 | INFO     | current chi2=0.0010229624501187896 (change=99.75143077182909 %)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,281 | INFO     | model: linear, x: [1718898511.0, 1718898572.0, 1718898633.0, 1718898694.0, 1718898755.0, 1718898816.0, 1718898877.0, 1718898938.0, 1718898999.0, 1718899060.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,281 | INFO     | sum of square deviations: 4024149870.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | sum of deviations: 9607008523.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | mean x: 1718905648.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | mean y: 2372574.821276596
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | -- intersect: -4101237316.469586
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | intersect: -4101237316.469586
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | chi2: 0.0007838427902918588
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | current chi2=0.0007838427902918588 (change=23.375213801754246 %)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | left removable region: 40
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | model: linear, x: [1718899731.0, 1718899792.0, 1718899853.0, 1718899914.0, 1718899975.0, 1718900036.0, 1718900097.0, 1718900158.0, 1718900219.0, 1718900280.0, 1718
[2024-06-20 21:47:46] 2024-06-20 19:47:32,282 | INFO     | sum of square deviations: 2830787960.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,283 | INFO     | sum of deviations: 6224864560.000001
[2024-06-20 21:47:46] 2024-06-20 19:47:32,283 | INFO     | mean x: 1718906075.0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,283 | INFO     | mean y: 2374166.3923444976
[2024-06-20 21:47:46] 2024-06-20 19:47:32,283 | INFO     | -- intersect: -3777477118.6315627
[2024-06-20 21:47:46] 2024-06-20 19:47:32,283 | INFO     | intersect: -3777477118.6315627
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | chi2: 0.0004412063211111606
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | -- intersect: -3777477118.6315627
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | current memory leak: 2.20 B/s (using 209 data points, chi2=0.00)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | ..............................
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . Timing measurements:
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . get job = 0 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . initial setup = 1 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . payload setup = 3 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . stage-in = 0 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . payload execution = 15554 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . stage-out = 0 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,284 | INFO     | . log creation = 0 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,285 | INFO     | ..............................
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | 
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | job summary report
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | --------------------------------------------------
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | PanDA job id: 6238851676
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | task id: 40024040
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | errors: (none)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | pilot state: finished 
[2024-06-20 21:47:46] 2024-06-20 19:47:32,342 | INFO     | transexitcode: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | exeerrorcode: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | exeerrordiag: 
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | exitcode: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | exitmsg: OK
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | cpuconsumptiontime: 58761 s
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | nevents: 400
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | neventsw: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | pid: 363549
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | pgrp: 363549
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | corecount: 4
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | event service: False
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | sizes: {0: 2386744, 1: 2386858, 4: 2387092, 11: 2387120, 15562: 2418100, 15563: 2427266, 15569: 2427380}
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | --------------------------------------------------
[2024-06-20 21:47:46] 2024-06-20 19:47:32,343 | INFO     | 
[2024-06-20 21:47:46] 2024-06-20 19:47:32,344 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-06-20 21:47:46] 2024-06-20 19:47:32,362 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,364 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 21:47:46] 2024-06-20 19:47:32,364 | INFO     | job 6238851676 has completed (purged errors)
[2024-06-20 21:47:46] 2024-06-20 19:47:32,364 | INFO     | overall cleanup function is called
[2024-06-20 21:47:46] 2024-06-20 19:47:33,371 | INFO     | --- collectZombieJob: --- 10, [363549]
[2024-06-20 21:47:46] 2024-06-20 19:47:33,371 | INFO     | zombie collector waiting for pid 363549
[2024-06-20 21:47:46] 2024-06-20 19:47:33,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 21:47:46] 2024-06-20 19:47:34,376 | INFO     | collected zombie processes
[2024-06-20 21:47:46] 2024-06-20 19:47:34,376 | INFO     | will now attempt to kill all subprocesses of pid=363549
[2024-06-20 21:47:46] 2024-06-20 19:47:34,515 | INFO     | process IDs to be killed: [363549] (in reverse order)
[2024-06-20 21:47:46] 2024-06-20 19:47:34,616 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 21:47:46] 2024-06-20 19:47:34,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 21:47:46] 2024-06-20 19:47:34,623 | INFO     | did not find any defunct processes belonging to 363549
[2024-06-20 21:47:46] 2024-06-20 19:47:34,629 | INFO     | did not find any defunct processes belonging to 363549
[2024-06-20 21:47:46] 2024-06-20 19:47:34,629 | INFO     | ready for new job
[2024-06-20 21:47:46] 2024-06-20 19:47:34,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 21:47:46] 2024-06-20 19:47:34,631 | INFO     | *************************************
[2024-06-20 21:47:46] 2024-06-20 19:47:34,631 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 21:47:46] 2024-06-20 19:47:34,631 | INFO     | *************************************
[2024-06-20 21:47:46] 2024-06-20 19:47:34,631 | INFO     | 
[2024-06-20 21:47:46] 2024-06-20 19:47:34,634 | INFO     | architecture information:
[2024-06-20 21:47:46] 2024-06-20 19:47:34,634 | INFO     | executing command: cat /etc/os-release
[2024-06-20 21:47:46] 2024-06-20 19:47:34,648 | INFO     | cat /etc/os-release:
[2024-06-20 21:47:46] NAME="CentOS Linux"
[2024-06-20 21:47:46] VERSION="7 (Core)"
[2024-06-20 21:47:46] ID="centos"
[2024-06-20 21:47:46] ID_LIKE="rhel fedora"
[2024-06-20 21:47:46] VERSION_ID="7"
[2024-06-20 21:47:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 21:47:46] ANSI_COLOR="0;31"
[2024-06-20 21:47:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 21:47:46] HOME_URL="https://www.centos.org/"
[2024-06-20 21:47:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 21:47:46] 
[2024-06-20 21:47:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 21:47:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 21:47:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 21:47:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 21:47:46] 
[2024-06-20 21:47:46] 2024-06-20 19:47:34,649 | INFO     | *************************************
[2024-06-20 21:47:46] 2024-06-20 19:47:35,151 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-06-20 21:47:46] 2024-06-20 19:47:35,167 | INFO     | sufficient remaining disk space (655949299712 B)
[2024-06-20 21:47:46] 2024-06-20 19:47:35,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 21:47:46] 2024-06-20 19:47:35,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 21:47:46] 2024-06-20 19:47:35,168 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-20 21:47:46] 2024-06-20 19:47:35,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 21:47:46] 2024-06-20 19:47:35,169 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 21:47:46] 2024-06-20 19:47:35,169 | INFO     | aborting loop
[2024-06-20 21:47:46] 2024-06-20 19:47:35,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 21:47:46] 2024-06-20 19:47:35,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 21:47:46] 2024-06-20 19:47:35,655 | INFO     | all data control threads have been joined
[2024-06-20 21:47:46] 2024-06-20 19:47:35,748 | INFO     | all job control threads have been joined
[2024-06-20 21:47:46] 2024-06-20 19:47:36,173 | INFO     | [job] retrieve thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:36,174 | INFO     | [job] job monitor thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:36,338 | INFO     | all payload control threads have been joined
[2024-06-20 21:47:46] 2024-06-20 19:47:36,425 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:36,529 | INFO     | [data] copytool_in thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:36,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 21:47:46] 2024-06-20 19:47:36,660 | INFO     | [data] control thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:36,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 21:47:46] 2024-06-20 19:47:36,753 | INFO     | [job] control thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,120 | INFO     | [job] validate thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,164 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,228 | INFO     | [payload] failed_post thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,324 | INFO     | [payload] validate_post thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,343 | INFO     | [payload] control thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 21:47:46] 2024-06-20 19:47:37,369 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:37,638 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:38,356 | INFO     | [job] queue monitor thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:38,651 | INFO     | [data] copytool_out thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:40,709 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 21:47:46] 2024-06-20 19:47:40,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47165742023744)>', '<ExcThread(monitor, started 47166267606784)>']
[2024-06-20 21:47:46] 2024-06-20 19:47:41,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 21:47:46] 2024-06-20 19:47:41,199 | INFO     | [monitor] control thread has ended
[2024-06-20 21:47:46] 2024-06-20 19:47:45,781 | INFO     | all workflow threads have been joined
[2024-06-20 21:47:46] 2024-06-20 19:47:45,781 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 21:47:46] 2024-06-20 19:47:45,781 | INFO     | traces error code: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:45,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 21:47:46] 2024-06-20 19:47:45,913 [wrapper] ==== pilot stdout END ====
[2024-06-20 21:47:46] 2024-06-20 19:47:45,915 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 21:47:46] 2024-06-20 19:47:45,917 [wrapper] pilotpid: 325333
[2024-06-20 21:47:46] 2024-06-20 19:47:45,920 [wrapper] Pilot exit status: 0
[2024-06-20 21:47:46] 2024-06-20 19:47:45,928 [wrapper] pandaids: 6238851676
[2024-06-20 21:47:46] 2024-06-20 19:47:46,005 [wrapper] cleanup supervisor_pilot  900108 325334
[2024-06-20 21:47:46] 2024-06-20 19:47:46,007 [wrapper] Test setup, not cleaning
[2024-06-20 21:47:46] 2024-06-20 19:47:46,009 [wrapper] ==== wrapper stdout END ====
[2024-06-20 21:47:46] 2024-06-20 19:47:46,012 [wrapper] ==== wrapper stderr END ====
[2024-06-20 21:47:46] 2024-06-20 19:47:46,016 [wrapper] apfmon messages muted
[2024-06-20 21:47:46]  *** Error codes and diagnostics ***
[2024-06-20 21:47:46]     "exeErrorCode": 0,
[2024-06-20 21:47:46]     "exeErrorDiag": "",
[2024-06-20 21:47:46]     "pilotErrorCode": 0,
[2024-06-20 21:47:46]     "pilotErrorDiag": "",
[2024-06-20 21:47:46]  *** Listing of results directory ***
[2024-06-20 21:47:46] total 870844
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc    469766 Jun 20 15:44 pilot3.tar.gz
[2024-06-20 21:47:46] -rwx------ 1 boinc boinc     32308 Jun 20 15:47 runpilot2-wrapper.sh
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc      5654 Jun 20 15:47 queuedata.json
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 21:47:46] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:25 run_atlas
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:25 job.xml
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc      6661 Jun 20 17:27 init_data.xml
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc 610399117 Jun 20 17:27 EVNT.40024038._000048.pool.root.1
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:27 start_atlas.sh
[2024-06-20 21:47:46] drwxrwx--x 2 boinc boinc      4096 Jun 20 17:27 shared
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc    482473 Jun 20 17:27 input.tar.gz
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc         0 Jun 20 17:27 boinc_lockfile
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc      2489 Jun 20 17:27 pandaJob.out
[2024-06-20 21:47:46] -rw------- 1 boinc boinc       424 Jun 20 17:27 setup.sh.local
[2024-06-20 21:47:46] -rw------- 1 boinc boinc   1015545 Jun 20 17:27 agis_schedconf.cvmfs.json
[2024-06-20 21:47:46] -rw------- 1 boinc boinc   1321254 Jun 20 17:27 cric_ddmendpoints.json
[2024-06-20 21:47:46] drwx------ 4 boinc boinc      4096 Jun 20 17:27 pilot3
[2024-06-20 21:47:46] -rw------- 1 boinc boinc        95 Jun 20 21:46 pilot_heartbeat.json
[2024-06-20 21:47:46] -rw------- 1 boinc boinc 273945341 Jun 20 21:46 HITS.40024040._000696.pool.root.1
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc       532 Jun 20 21:46 boinc_task_state.xml
[2024-06-20 21:47:46] -rw------- 1 boinc boinc      1042 Jun 20 21:47 memory_monitor_summary.json
[2024-06-20 21:47:46] -rw------- 1 boinc boinc         0 Jun 20 21:47 agis_ddmendpoints.agis.ALL.json
[2024-06-20 21:47:46] -rw------- 1 boinc boinc    364515 Jun 20 21:47 log.40024040._000696.job.log.tgz.1
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc      8192 Jun 20 21:47 boinc_mmap_file
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc        28 Jun 20 21:47 wrapper_checkpoint.txt
[2024-06-20 21:47:46] -rw------- 1 boinc boinc      7755 Jun 20 21:47 heartbeat.json
[2024-06-20 21:47:46] -rw------- 1 boinc boinc      4344 Jun 20 21:47 pilotlog.txt
[2024-06-20 21:47:46] -rw------- 1 boinc boinc   1570537 Jun 20 21:47 log.40024040._000696.job.log.1
[2024-06-20 21:47:46] -rw------- 1 boinc boinc       357 Jun 20 21:47 output.list
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc       620 Jun 20 21:47 runtime_log
[2024-06-20 21:47:46] -rw------- 1 boinc boinc   1955840 Jun 20 21:47 result.tar.gz
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc     11410 Jun 20 21:47 runtime_log.err
[2024-06-20 21:47:46] -rw------- 1 boinc boinc       658 Jun 20 21:47 T1cNDmTJXe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmDlKDm1s94Vn.diag
[2024-06-20 21:47:46] -rw-r--r-- 1 boinc boinc     21312 Jun 20 21:47 stderr.txt
[2024-06-20 21:47:46] HITS file was successfully produced:
[2024-06-20 21:47:46] -rw------- 1 boinc boinc 273945341 Jun 20 21:46 shared/HITS.pool.root.1
[2024-06-20 21:47:46]  *** Contents of shared directory: ***
[2024-06-20 21:47:46] total 866036
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc 610399117 Jun 20 17:27 ATLAS.root_0
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:27 start_atlas.sh
[2024-06-20 21:47:46] -rw-r--r-- 2 boinc boinc    482473 Jun 20 17:27 input.tar.gz
[2024-06-20 21:47:46] -rw------- 1 boinc boinc 273945341 Jun 20 21:46 HITS.pool.root.1
[2024-06-20 21:47:46] -rw------- 1 boinc boinc   1955840 Jun 20 21:47 result.tar.gz
21:47:48 (311273): run_atlas exited; CPU time 58516.510021
21:47:48 (311273): called boinc_finish(0)

</stderr_txt>
]]>

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