Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:54 (2706759): wrapper (7.7.26015): starting
11:02:54 (2706759): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 11:02:54] Arguments: --nthreads 4
[2024-06-21 11:02:54] Threads: 4
[2024-06-21 11:02:54] Checking for CVMFS
[2024-06-21 11:02:54] No cvmfs_config command found, will try listing directly
[2024-06-21 11:02:54] CVMFS is ok
[2024-06-21 11:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 11:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 11:02:54] Further information can be found at the LHC@home message board.
[2024-06-21 11:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 11:02:54] Checking for apptainer binary...
[2024-06-21 11:02:54] which: no apptainer in ((null))
[2024-06-21 11:02:54] apptainer is not installed, using version from CVMFS
[2024-06-21 11:02:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 11:02:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-21 11:02:55] apptainer works
[2024-06-21 11:02:55] Set ATHENA_PROC_NUMBER=4
[2024-06-21 11:02:55] Set ATHENA_CORE_NUMBER=4
[2024-06-21 11:02:55] Starting ATLAS job with PandaID=6238851655
[2024-06-21 11:02:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 15:38:18]  *** The last 200 lines of the pilot log: ***
[2024-06-21 15:38:18] 2024-06-21 13:38:01,757 | INFO     | intersect: -5705777653.131192
[2024-06-21 15:38:18] 2024-06-21 13:38:01,758 | INFO     | chi2: 0.004028060408097649
[2024-06-21 15:38:18] 2024-06-21 13:38:01,758 | INFO     | current chi2=0.004028060408097649 (change=94.55830467244814 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,758 | INFO     | model: linear, x: [1718961835.0, 1718961896.0, 1718961957.0, 1718962018.0, 1718962079.0, 1718962140.0, 1718962201.0, 1718962262.0, 1718962323.0, 1718962384.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,758 | INFO     | sum of square deviations: 4844974562.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,760 | INFO     | sum of deviations: 14081298499.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,760 | INFO     | mean x: 1718969429.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,761 | INFO     | mean y: 2372809.464
[2024-06-21 15:38:18] 2024-06-21 13:38:01,761 | INFO     | -- intersect: -4993591841.164698
[2024-06-21 15:38:18] 2024-06-21 13:38:01,761 | INFO     | intersect: -4993591841.164698
[2024-06-21 15:38:18] 2024-06-21 13:38:01,761 | INFO     | chi2: 0.0013432104086877476
[2024-06-21 15:38:18] 2024-06-21 13:38:01,761 | INFO     | current chi2=0.0013432104086877476 (change=66.65366770598875 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,762 | INFO     | model: linear, x: [1718962140.0, 1718962201.0, 1718962262.0, 1718962323.0, 1718962384.0, 1718962445.0, 1718962506.0, 1718962567.0, 1718962628.0, 1718962689.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,762 | INFO     | sum of square deviations: 4560048290.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,764 | INFO     | sum of deviations: 12189918529.999998
[2024-06-21 15:38:18] 2024-06-21 13:38:01,764 | INFO     | mean x: 1718969582.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,764 | INFO     | mean y: 2373821.1265306124
[2024-06-21 15:38:18] 2024-06-21 13:38:01,764 | INFO     | -- intersect: -4592774700.892334
[2024-06-21 15:38:18] 2024-06-21 13:38:01,764 | INFO     | intersect: -4592774700.892334
[2024-06-21 15:38:18] 2024-06-21 13:38:01,765 | INFO     | chi2: 0.0005698441109468096
[2024-06-21 15:38:18] 2024-06-21 13:38:01,765 | INFO     | current chi2=0.0005698441109468096 (change=57.575960753347644 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,765 | INFO     | model: linear, x: [1718962445.0, 1718962506.0, 1718962567.0, 1718962628.0, 1718962689.0, 1718962750.0, 1718962811.0, 1718962872.0, 1718962933.0, 1718962994.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,765 | INFO     | sum of square deviations: 4286517580.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,767 | INFO     | sum of deviations: 10925703808.499998
[2024-06-21 15:38:18] 2024-06-21 13:38:01,767 | INFO     | mean x: 1718969734.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,767 | INFO     | mean y: 2374525.1458333335
[2024-06-21 15:38:18] 2024-06-21 13:38:01,767 | INFO     | -- intersect: -4379026886.2354965
[2024-06-21 15:38:18] 2024-06-21 13:38:01,768 | INFO     | intersect: -4379026886.2354965
[2024-06-21 15:38:18] 2024-06-21 13:38:01,768 | INFO     | chi2: 0.0003571595691970555
[2024-06-21 15:38:18] 2024-06-21 13:38:01,768 | INFO     | current chi2=0.0003571595691970555 (change=37.323285029018486 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,768 | INFO     | model: linear, x: [1718962750.0, 1718962811.0, 1718962872.0, 1718962933.0, 1718962994.0, 1718963055.0, 1718963116.0, 1718963177.0, 1718963238.0, 1718963299.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,769 | INFO     | sum of square deviations: 4024149870.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,770 | INFO     | sum of deviations: 9958705365.000002
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | mean x: 1718969887.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | mean y: 2375086.0510638296
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | -- intersect: -4251620214.5614223
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | intersect: -4251620214.5614223
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | chi2: 0.0002647808927624602
[2024-06-21 15:38:18] 2024-06-21 13:38:01,771 | INFO     | current chi2=0.0002647808927624602 (change=25.864819089762996 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,772 | INFO     | model: linear, x: [1718963055.0, 1718963116.0, 1718963177.0, 1718963238.0, 1718963299.0, 1718963360.0, 1718963421.0, 1718963482.0, 1718963543.0, 1718963604.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,772 | INFO     | sum of square deviations: 3772712597.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | sum of deviations: 9232367629.000002
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | mean x: 1718970039.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | mean y: 2375526.6608695653
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | -- intersect: -4204190157.249712
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | intersect: -4204190157.249712
[2024-06-21 15:38:18] 2024-06-21 13:38:01,774 | INFO     | chi2: 0.0002564911112908845
[2024-06-21 15:38:18] 2024-06-21 13:38:01,775 | INFO     | current chi2=0.0002564911112908845 (change=3.1308080371994964 %)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,775 | INFO     | left removable region: 80
[2024-06-21 15:38:18] 2024-06-21 13:38:01,775 | INFO     | model: linear, x: [1718965495.0, 1718965556.0, 1718965617.0, 1718965678.0, 1718965739.0, 1718965800.0, 1718965861.0, 1718965922.0, 1718965983.0, 1718966044.0, 1718
[2024-06-21 15:38:18] 2024-06-21 13:38:01,775 | INFO     | sum of square deviations: 1931608310.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,776 | INFO     | sum of deviations: 4831771143.0
[2024-06-21 15:38:18] 2024-06-21 13:38:01,776 | INFO     | mean x: 1718971076.5
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | mean y: 2378209.695652174
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | -- intersect: -4297497080.799627
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | intersect: -4297497080.799627
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | chi2: 0.00017995200740188722
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | -- intersect: -4297497080.799627
[2024-06-21 15:38:18] 2024-06-21 13:38:01,777 | INFO     | current memory leak: 2.50 B/s (using 184 data points, chi2=0.00)
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | ..............................
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . Timing measurements:
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . get job = 0 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . initial setup = 1 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . payload setup = 6 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . stage-in = 0 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,778 | INFO     | . payload execution = 16457 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,779 | INFO     | . stage-out = 1 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,779 | INFO     | . log creation = 0 s
[2024-06-21 15:38:18] 2024-06-21 13:38:01,779 | INFO     | ..............................
[2024-06-21 15:38:18] 2024-06-21 13:38:02,179 | INFO     | 16496s have passed since pilot start
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | 
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | job summary report
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | --------------------------------------------------
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | PanDA job id: 6238851655
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | task id: 40024040
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | errors: (none)
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | pilot state: finished 
[2024-06-21 15:38:18] 2024-06-21 13:38:02,208 | INFO     | transexitcode: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | exeerrorcode: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | exeerrordiag: 
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | exitcode: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | exitmsg: OK
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | cpuconsumptiontime: 62566 s
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | nevents: 400
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | neventsw: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | pid: 2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | pgrp: 2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | corecount: 4
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | event service: False
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | sizes: {0: 2386854, 5: 2387060, 11: 2387116, 16467: 2418634, 16468: 2418633, 16470: 2427671, 16471: 2427855, 16480: 2428025}
[2024-06-21 15:38:18] 2024-06-21 13:38:02,209 | INFO     | --------------------------------------------------
[2024-06-21 15:38:18] 2024-06-21 13:38:02,210 | INFO     | 
[2024-06-21 15:38:18] 2024-06-21 13:38:02,210 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-06-21 15:38:18] 2024-06-21 13:38:02,231 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,233 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 15:38:18] 2024-06-21 13:38:02,234 | INFO     | job 6238851655 has completed (purged errors)
[2024-06-21 15:38:18] 2024-06-21 13:38:02,234 | INFO     | overall cleanup function is called
[2024-06-21 15:38:18] 2024-06-21 13:38:03,241 | INFO     | --- collectZombieJob: --- 10, [2718095]
[2024-06-21 15:38:18] 2024-06-21 13:38:03,241 | INFO     | zombie collector waiting for pid 2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:03,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 15:38:18] 2024-06-21 13:38:04,246 | INFO     | collected zombie processes
[2024-06-21 15:38:18] 2024-06-21 13:38:04,246 | INFO     | will now attempt to kill all subprocesses of pid=2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:04,445 | INFO     | process IDs to be killed: [2718095] (in reverse order)
[2024-06-21 15:38:18] 2024-06-21 13:38:04,588 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 15:38:18] 2024-06-21 13:38:04,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 15:38:18] 2024-06-21 13:38:04,598 | INFO     | did not find any defunct processes belonging to 2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:04,607 | INFO     | did not find any defunct processes belonging to 2718095
[2024-06-21 15:38:18] 2024-06-21 13:38:04,607 | INFO     | ready for new job
[2024-06-21 15:38:18] 2024-06-21 13:38:04,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 15:38:18] 2024-06-21 13:38:04,609 | INFO     | *************************************
[2024-06-21 15:38:18] 2024-06-21 13:38:04,610 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 15:38:18] 2024-06-21 13:38:04,610 | INFO     | *************************************
[2024-06-21 15:38:18] 2024-06-21 13:38:04,610 | INFO     | 
[2024-06-21 15:38:18] 2024-06-21 13:38:04,614 | INFO     | architecture information:
[2024-06-21 15:38:18] 2024-06-21 13:38:04,615 | INFO     | executing command: cat /etc/os-release
[2024-06-21 15:38:18] 2024-06-21 13:38:04,633 | INFO     | cat /etc/os-release:
[2024-06-21 15:38:18] NAME="CentOS Linux"
[2024-06-21 15:38:18] VERSION="7 (Core)"
[2024-06-21 15:38:18] ID="centos"
[2024-06-21 15:38:18] ID_LIKE="rhel fedora"
[2024-06-21 15:38:18] VERSION_ID="7"
[2024-06-21 15:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 15:38:18] ANSI_COLOR="0;31"
[2024-06-21 15:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 15:38:18] HOME_URL="https://www.centos.org/"
[2024-06-21 15:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 15:38:18] 
[2024-06-21 15:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 15:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 15:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 15:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 15:38:18] 
[2024-06-21 15:38:18] 2024-06-21 13:38:04,633 | INFO     | *************************************
[2024-06-21 15:38:18] 2024-06-21 13:38:05,136 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-06-21 15:38:18] 2024-06-21 13:38:05,158 | INFO     | sufficient remaining disk space (662971613184 B)
[2024-06-21 15:38:18] 2024-06-21 13:38:05,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 15:38:18] 2024-06-21 13:38:05,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 15:38:18] 2024-06-21 13:38:05,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 15:38:18] 2024-06-21 13:38:05,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 15:38:18] 2024-06-21 13:38:05,159 | INFO     | aborting loop
[2024-06-21 15:38:18] 2024-06-21 13:38:05,189 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 15:38:18] 2024-06-21 13:38:05,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 15:38:18] 2024-06-21 13:38:05,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 15:38:18] 2024-06-21 13:38:05,332 | INFO     | all job control threads have been joined
[2024-06-21 15:38:18] 2024-06-21 13:38:05,856 | INFO     | all payload control threads have been joined
[2024-06-21 15:38:18] 2024-06-21 13:38:06,116 | INFO     | all data control threads have been joined
[2024-06-21 15:38:18] 2024-06-21 13:38:06,164 | INFO     | [job] retrieve thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,164 | INFO     | [job] job monitor thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,337 | INFO     | [job] control thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,353 | INFO     | [data] copytool_in thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,387 | INFO     | [job] validate thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,679 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,861 | INFO     | [payload] control thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:06,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 15:38:18] 2024-06-21 13:38:06,968 | INFO     | [payload] validate_post thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,121 | INFO     | [data] control thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,164 | INFO     | [data] copytool_out thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,199 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,443 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,572 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,717 | INFO     | [payload] failed_post thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:07,902 | INFO     | [job] queue monitor thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:08,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 15:38:18] 2024-06-21 13:38:12,281 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 15:38:18] 2024-06-21 13:38:12,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47100422751296)>', '<ExcThread(monitor, started 47100613531392)>']
[2024-06-21 15:38:18] 2024-06-21 13:38:13,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 15:38:18] 2024-06-21 13:38:13,228 | INFO     | [monitor] control thread has ended
[2024-06-21 15:38:18] 2024-06-21 13:38:17,613 | INFO     | all workflow threads have been joined
[2024-06-21 15:38:18] 2024-06-21 13:38:17,613 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 15:38:18] 2024-06-21 13:38:17,613 | INFO     | traces error code: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:17,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 15:38:18] 2024-06-21 13:38:17,732 [wrapper] ==== pilot stdout END ====
[2024-06-21 15:38:18] 2024-06-21 13:38:17,734 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 15:38:18] 2024-06-21 13:38:17,736 [wrapper] pilotpid: 2711137
[2024-06-21 15:38:18] 2024-06-21 13:38:17,763 [wrapper] Pilot exit status: 0
[2024-06-21 15:38:18] 2024-06-21 13:38:17,772 [wrapper] pandaids: 6238851655
[2024-06-21 15:38:18] 2024-06-21 13:38:17,850 [wrapper] cleanup supervisor_pilot 3351965 2711138
[2024-06-21 15:38:18] 2024-06-21 13:38:17,852 [wrapper] Test setup, not cleaning
[2024-06-21 15:38:18] 2024-06-21 13:38:17,867 [wrapper] ==== wrapper stdout END ====
[2024-06-21 15:38:18] 2024-06-21 13:38:17,880 [wrapper] ==== wrapper stderr END ====
[2024-06-21 15:38:18] 2024-06-21 13:38:17,891 [wrapper] apfmon messages muted
[2024-06-21 15:38:18]  *** Error codes and diagnostics ***
[2024-06-21 15:38:18]     "exeErrorCode": 0,
[2024-06-21 15:38:18]     "exeErrorDiag": "",
[2024-06-21 15:38:18]     "pilotErrorCode": 0,
[2024-06-21 15:38:18]     "pilotErrorDiag": "",
[2024-06-21 15:38:18]  *** Listing of results directory ***
[2024-06-21 15:38:18] total 875288
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc    469766 Jun 20 15:44 pilot3.tar.gz
[2024-06-21 15:38:18] -rwx------ 1 boinc boinc     32308 Jun 20 15:47 runpilot2-wrapper.sh
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc      5654 Jun 20 15:47 queuedata.json
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc       100 Jun 21 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 15:38:18] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 11:02 run_atlas
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc       105 Jun 21 11:02 job.xml
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc      6661 Jun 21 11:02 init_data.xml
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc 610399117 Jun 21 11:02 EVNT.40024038._000048.pool.root.1
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:02 start_atlas.sh
[2024-06-21 15:38:18] drwxrwx--x 2 boinc boinc      4096 Jun 21 11:02 shared
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc    482462 Jun 21 11:02 input.tar.gz
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc         0 Jun 21 11:02 boinc_lockfile
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc      2488 Jun 21 11:02 pandaJob.out
[2024-06-21 15:38:18] -rw------- 1 boinc boinc       424 Jun 21 11:02 setup.sh.local
[2024-06-21 15:38:18] -rw------- 1 boinc boinc   1023459 Jun 21 11:03 agis_schedconf.cvmfs.json
[2024-06-21 15:38:18] -rw------- 1 boinc boinc   1321251 Jun 21 11:03 cric_ddmendpoints.json
[2024-06-21 15:38:18] drwx------ 4 boinc boinc      4096 Jun 21 11:03 pilot3
[2024-06-21 15:38:18] -rw------- 1 boinc boinc 277946414 Jun 21 15:37 HITS.40024040._000686.pool.root.1
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc       532 Jun 21 15:37 boinc_task_state.xml
[2024-06-21 15:38:18] -rw------- 1 boinc boinc      1046 Jun 21 15:37 memory_monitor_summary.json
[2024-06-21 15:38:18] -rw------- 1 boinc boinc         0 Jun 21 15:37 agis_ddmendpoints.agis.ALL.json
[2024-06-21 15:38:18] -rw------- 1 boinc boinc    369063 Jun 21 15:37 log.40024040._000686.job.log.tgz.1
[2024-06-21 15:38:18] -rw------- 1 boinc boinc        95 Jun 21 15:37 pilot_heartbeat.json
[2024-06-21 15:38:18] -rw------- 1 boinc boinc      7757 Jun 21 15:38 heartbeat.json
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc        28 Jun 21 15:38 wrapper_checkpoint.txt
[2024-06-21 15:38:18] -rw------- 1 boinc boinc      4221 Jun 21 15:38 pilotlog.txt
[2024-06-21 15:38:18] -rw------- 1 boinc boinc   1838287 Jun 21 15:38 log.40024040._000686.job.log.1
[2024-06-21 15:38:18] -rw------- 1 boinc boinc       357 Jun 21 15:38 output.list
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc       620 Jun 21 15:38 runtime_log
[2024-06-21 15:38:18] -rw------- 1 boinc boinc   2222080 Jun 21 15:38 result.tar.gz
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc     11410 Jun 21 15:38 runtime_log.err
[2024-06-21 15:38:18] -rw------- 1 boinc boinc       659 Jun 21 15:38 OtaMDm9IXe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmamqKDmAB9FBo.diag
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc     21366 Jun 21 15:38 stderr.txt
[2024-06-21 15:38:18] -rw-r--r-- 1 boinc boinc      8192 Jun 21 15:38 boinc_mmap_file
[2024-06-21 15:38:18] HITS file was successfully produced:
[2024-06-21 15:38:18] -rw------- 1 boinc boinc 277946414 Jun 21 15:37 shared/HITS.pool.root.1
[2024-06-21 15:38:18]  *** Contents of shared directory: ***
[2024-06-21 15:38:18] total 870204
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc 610399117 Jun 21 11:02 ATLAS.root_0
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc     17537 Jun 21 11:02 start_atlas.sh
[2024-06-21 15:38:18] -rw-r--r-- 2 boinc boinc    482462 Jun 21 11:02 input.tar.gz
[2024-06-21 15:38:18] -rw------- 1 boinc boinc 277946414 Jun 21 15:37 HITS.pool.root.1
[2024-06-21 15:38:18] -rw------- 1 boinc boinc   2222080 Jun 21 15:38 result.tar.gz
15:38:20 (2706759): run_atlas exited; CPU time 62286.988641
15:38:20 (2706759): called boinc_finish(0)

</stderr_txt>
]]>

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