Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:14:13 (3981627): wrapper (7.7.26015): starting
20:14:13 (3981627): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 20:14:13] Arguments: --nthreads 4
[2024-06-21 20:14:13] Threads: 4
[2024-06-21 20:14:13] Checking for CVMFS
[2024-06-21 20:14:13] No cvmfs_config command found, will try listing directly
[2024-06-21 20:14:13] CVMFS is ok
[2024-06-21 20:14:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 20:14:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 20:14:13] Further information can be found at the LHC@home message board.
[2024-06-21 20:14:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 20:14:13] Checking for apptainer binary...
[2024-06-21 20:14:13] which: no apptainer in ((null))
[2024-06-21 20:14:13] apptainer is not installed, using version from CVMFS
[2024-06-21 20:14:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 20:14:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-21 20:14:14] apptainer works
[2024-06-21 20:14:14] Set ATHENA_PROC_NUMBER=4
[2024-06-21 20:14:14] Set ATHENA_CORE_NUMBER=4
[2024-06-21 20:14:14] Starting ATLAS job with PandaID=6238851646
[2024-06-21 20:14:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 00:47:16]  *** The last 200 lines of the pilot log: ***
[2024-06-22 00:47:16] 2024-06-21 22:46:54,839 | INFO     | fitting pss+swap vs Time
[2024-06-22 00:47:16] 2024-06-21 22:46:54,839 | INFO     | model: linear, x: [1718993707.0, 1718993768.0, 1718993829.0, 1718993890.0, 1718993951.0, 1718994012.0, 1718994073.0, 1718994134.0, 1718994195.0, 1718994256.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,839 | INFO     | sum of square deviations: 5968658887.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | sum of deviations: 56842361298.50001
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | mean x: 1719001850.5
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | mean y: 2341122.600746269
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | -- intersect: -16368526455.664177
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | intersect: -16368526455.664177
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | chi2: 4.374155666495524
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | model: linear, x: [1718993707.0, 1718993768.0, 1718993829.0, 1718993890.0, 1718993951.0, 1718994012.0, 1718994073.0, 1718994134.0, 1718994195.0, 1718994256.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,841 | INFO     | sum of square deviations: 5640782972.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | sum of deviations: 72783395071.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | mean x: 1719001698.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | mean y: 2348415.600760456
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | -- intersect: -22178043975.722363
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | intersect: -22178043975.722363
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | chi2: 3.5912088911611555
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | current chi2=3.5912088911611555 (change=17.89938070406277 %)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | right removable region: 262
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | model: linear, x: [1718994012.0, 1718994073.0, 1718994134.0, 1718994195.0, 1718994256.0, 1718994317.0, 1718994378.0, 1718994439.0, 1718994500.0, 1718994561.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,843 | INFO     | sum of square deviations: 5640782972.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | sum of deviations: -2204351266.000002
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | mean x: 1719002003.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | mean y: 2368509.1482889736
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | -- intersect: 674134159.4807034
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | intersect: 674134159.4807034
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | chi2: 2.1306357765067325
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | current chi2=2.1306357765067325 (change=51.29035318000581 %)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | model: linear, x: [1718994317.0, 1718994378.0, 1718994439.0, 1718994500.0, 1718994561.0, 1718994622.0, 1718994683.0, 1718994744.0, 1718994805.0, 1718994866.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,845 | INFO     | sum of square deviations: 5325139844.5
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | sum of deviations: -46020846527.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | mean x: 1719002155.5
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | mean y: 2389679.093023256
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | -- intersect: 14858325239.086878
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | intersect: 14858325239.086878
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | chi2: 0.998653631354788
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | current chi2=0.998653631354788 (change=53.12884340128171 %)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,847 | INFO     | model: linear, x: [1718994622.0, 1718994683.0, 1718994744.0, 1718994805.0, 1718994866.0, 1718994927.0, 1718994988.0, 1718995049.0, 1718995110.0, 1718995171.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,848 | INFO     | sum of square deviations: 5021496942.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | sum of deviations: -47014731422.00001
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | mean x: 1719002308.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | mean y: 2390133.6877470356
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | -- intersect: 16096880035.384106
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | intersect: 16096880035.384106
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | chi2: 0.9532554041529394
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | current chi2=0.9532554041529394 (change=4.545943235620213 %)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | left removable region: 30
[2024-06-22 00:47:16] 2024-06-21 22:46:54,849 | INFO     | model: linear, x: [1718995537.0, 1718995598.0, 1718995659.0, 1718995720.0, 1718995781.0, 1718995842.0, 1718995903.0, 1718995964.0, 1718996025.0, 1718996086.0, 1718
[2024-06-22 00:47:16] 2024-06-21 22:46:54,850 | INFO     | sum of square deviations: 3871990738.0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,850 | INFO     | sum of deviations: -5579223266.5
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | mean x: 1719002582.5
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | mean y: 2384897.8060344825
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | -- intersect: 2479327600.5180435
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | intersect: 2479327600.5180435
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | chi2: 0.03583436843528294
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | -- intersect: 2479327600.5180435
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | current memory leak: -1.44 B/s (using 232 data points, chi2=0.04)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | ..............................
[2024-06-22 00:47:16] 2024-06-21 22:46:54,851 | INFO     | . Timing measurements:
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . get job = 0 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . initial setup = 1 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . payload setup = 9 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . stage-in = 0 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . payload execution = 16304 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . stage-out = 1 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | . log creation = 0 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,852 | INFO     | ..............................
[2024-06-22 00:47:16] 2024-06-21 22:46:54,908 | INFO     | 
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | job summary report
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | --------------------------------------------------
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | PanDA job id: 6238851646
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | task id: 40024040
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | errors: (none)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | pilot state: finished 
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | transexitcode: 0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,909 | INFO     | exeerrorcode: 0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | exeerrordiag: 
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | exitcode: 0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | exitmsg: OK
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | cpuconsumptiontime: 61985 s
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | nevents: 400
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | neventsw: 0
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | pid: 3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | pgrp: 3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | corecount: 4
[2024-06-22 00:47:16] 2024-06-21 22:46:54,910 | INFO     | event service: False
[2024-06-22 00:47:16] 2024-06-21 22:46:54,911 | INFO     | sizes: {0: 2386760, 1: 2386902, 9: 2387108, 11: 2387136, 16317: 2418569, 16319: 2427551, 16321: 2427735, 16326: 2427905}
[2024-06-22 00:47:16] 2024-06-21 22:46:54,911 | INFO     | --------------------------------------------------
[2024-06-22 00:47:16] 2024-06-21 22:46:54,911 | INFO     | 
[2024-06-22 00:47:16] 2024-06-21 22:46:54,911 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,933 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 00:47:16] 2024-06-21 22:46:54,934 | INFO     | job 6238851646 has completed (purged errors)
[2024-06-22 00:47:16] 2024-06-21 22:46:54,934 | INFO     | overall cleanup function is called
[2024-06-22 00:47:16] 2024-06-21 22:46:55,941 | INFO     | --- collectZombieJob: --- 10, [3993608]
[2024-06-22 00:47:16] 2024-06-21 22:46:55,941 | INFO     | zombie collector waiting for pid 3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:55,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 00:47:16] 2024-06-21 22:46:56,946 | INFO     | collected zombie processes
[2024-06-22 00:47:16] 2024-06-21 22:46:56,946 | INFO     | will now attempt to kill all subprocesses of pid=3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:57,122 | INFO     | process IDs to be killed: [3993608] (in reverse order)
[2024-06-22 00:47:16] 2024-06-21 22:46:57,254 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 00:47:16] 2024-06-21 22:46:57,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 00:47:16] 2024-06-21 22:46:57,262 | INFO     | did not find any defunct processes belonging to 3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:57,269 | INFO     | did not find any defunct processes belonging to 3993608
[2024-06-22 00:47:16] 2024-06-21 22:46:57,269 | INFO     | ready for new job
[2024-06-22 00:47:16] 2024-06-21 22:46:57,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 00:47:16] 2024-06-21 22:46:57,271 | INFO     | *************************************
[2024-06-22 00:47:16] 2024-06-21 22:46:57,271 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 00:47:16] 2024-06-21 22:46:57,271 | INFO     | *************************************
[2024-06-22 00:47:16] 2024-06-21 22:46:57,271 | INFO     | 
[2024-06-22 00:47:16] 2024-06-21 22:46:57,274 | INFO     | architecture information:
[2024-06-22 00:47:16] 2024-06-21 22:46:57,274 | INFO     | executing command: cat /etc/os-release
[2024-06-22 00:47:16] 2024-06-21 22:46:57,295 | INFO     | cat /etc/os-release:
[2024-06-22 00:47:16] NAME="CentOS Linux"
[2024-06-22 00:47:16] VERSION="7 (Core)"
[2024-06-22 00:47:16] ID="centos"
[2024-06-22 00:47:16] ID_LIKE="rhel fedora"
[2024-06-22 00:47:16] VERSION_ID="7"
[2024-06-22 00:47:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 00:47:16] ANSI_COLOR="0;31"
[2024-06-22 00:47:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 00:47:16] HOME_URL="https://www.centos.org/"
[2024-06-22 00:47:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 00:47:16] 
[2024-06-22 00:47:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 00:47:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 00:47:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 00:47:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 00:47:16] 
[2024-06-22 00:47:16] 2024-06-21 22:46:57,295 | INFO     | *************************************
[2024-06-22 00:47:16] 2024-06-21 22:46:57,798 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-06-22 00:47:16] 2024-06-21 22:46:57,820 | INFO     | sufficient remaining disk space (659154796544 B)
[2024-06-22 00:47:16] 2024-06-21 22:46:57,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 00:47:16] 2024-06-21 22:46:57,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 00:47:16] 2024-06-21 22:46:57,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 00:47:16] 2024-06-21 22:46:57,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 00:47:16] 2024-06-21 22:46:57,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 00:47:16] 2024-06-21 22:46:57,823 | INFO     | will abort loop
[2024-06-22 00:47:16] 2024-06-21 22:46:58,058 | INFO     | all data control threads have been joined
[2024-06-22 00:47:16] 2024-06-21 22:46:58,172 | INFO     | all payload control threads have been joined
[2024-06-22 00:47:16] 2024-06-21 22:46:58,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 00:47:16] 2024-06-21 22:46:58,722 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 00:47:16] 2024-06-21 22:46:58,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 00:47:16] 2024-06-21 22:46:58,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 00:47:16] 2024-06-21 22:46:58,826 | INFO     | [job] retrieve thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:58,828 | INFO     | [job] job monitor thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,059 | INFO     | [payload] failed_post thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,063 | INFO     | [data] control thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,134 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,177 | INFO     | [payload] control thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,225 | INFO     | all job control threads have been joined
[2024-06-22 00:47:16] 2024-06-21 22:46:59,428 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,516 | INFO     | [data] copytool_in thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,629 | INFO     | [job] validate thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:46:59,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 00:47:16] 2024-06-21 22:47:00,119 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:00,184 | INFO     | [data] copytool_out thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:00,230 | INFO     | [job] control thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:00,325 | INFO     | [payload] validate_post thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:00,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 00:47:16] 2024-06-21 22:47:00,923 | INFO     | [job] queue monitor thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:04,378 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:08,635 | INFO     | job.realtimelogging is not enabled
[2024-06-22 00:47:16] 2024-06-21 22:47:09,640 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 00:47:16] 2024-06-21 22:47:10,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47535810044992)>', '<ExcThread(monitor, started 47535992420096)>']
[2024-06-22 00:47:16] 2024-06-21 22:47:10,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 00:47:16] 2024-06-21 22:47:10,772 | INFO     | [monitor] control thread has ended
[2024-06-22 00:47:16] 2024-06-21 22:47:15,252 | INFO     | all workflow threads have been joined
[2024-06-22 00:47:16] 2024-06-21 22:47:15,252 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 00:47:16] 2024-06-21 22:47:15,252 | INFO     | traces error code: 0
[2024-06-22 00:47:16] 2024-06-21 22:47:15,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 00:47:16] 2024-06-21 22:47:15,397 [wrapper] ==== pilot stdout END ====
[2024-06-22 00:47:16] 2024-06-21 22:47:15,404 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 00:47:16] 2024-06-21 22:47:15,405 [wrapper] pilotpid: 3986508
[2024-06-22 00:47:16] 2024-06-21 22:47:15,407 [wrapper] Pilot exit status: 0
[2024-06-22 00:47:16] 2024-06-21 22:47:15,427 [wrapper] pandaids: 6238851646
[2024-06-22 00:47:16] 2024-06-21 22:47:15,487 [wrapper] cleanup supervisor_pilot  448322 3986509
[2024-06-22 00:47:16] 2024-06-21 22:47:15,489 [wrapper] Test setup, not cleaning
[2024-06-22 00:47:16] 2024-06-21 22:47:15,490 [wrapper] ==== wrapper stdout END ====
[2024-06-22 00:47:16] 2024-06-21 22:47:15,492 [wrapper] ==== wrapper stderr END ====
[2024-06-22 00:47:16] 2024-06-21 22:47:15,495 [wrapper] apfmon messages muted
[2024-06-22 00:47:16]  *** Error codes and diagnostics ***
[2024-06-22 00:47:16]     "exeErrorCode": 0,
[2024-06-22 00:47:16]     "exeErrorDiag": "",
[2024-06-22 00:47:16]     "pilotErrorCode": 0,
[2024-06-22 00:47:16]     "pilotErrorDiag": "",
[2024-06-22 00:47:16]  *** Listing of results directory ***
[2024-06-22 00:47:16] total 879552
[2024-06-22 00:47:16] -rwx------ 1 boinc boinc     32308 Jun 20 15:44 runpilot2-wrapper.sh
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc    469766 Jun 20 15:44 pilot3.tar.gz
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc      5654 Jun 20 15:44 queuedata.json
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc       100 Jun 21 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 00:47:16] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 20:14 run_atlas
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc       105 Jun 21 20:14 job.xml
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc    482466 Jun 21 20:14 input.tar.gz
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc      6661 Jun 21 20:14 init_data.xml
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc 610399117 Jun 21 20:14 EVNT.40024038._000048.pool.root.1
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc     17537 Jun 21 20:14 start_atlas.sh
[2024-06-22 00:47:16] drwxrwx--x 2 boinc boinc      4096 Jun 21 20:14 shared
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc         0 Jun 21 20:14 boinc_lockfile
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc      2488 Jun 21 20:14 pandaJob.out
[2024-06-22 00:47:16] -rw------- 1 boinc boinc       424 Jun 21 20:14 setup.sh.local
[2024-06-22 00:47:16] -rw------- 1 boinc boinc   1025648 Jun 21 20:14 agis_schedconf.cvmfs.json
[2024-06-22 00:47:16] -rw------- 1 boinc boinc   1321363 Jun 21 20:14 cric_ddmendpoints.json
[2024-06-22 00:47:16] drwx------ 4 boinc boinc      4096 Jun 21 20:14 pilot3
[2024-06-22 00:47:16] -rw------- 1 boinc boinc 282746026 Jun 22 00:46 HITS.40024040._000681.pool.root.1
[2024-06-22 00:47:16] -rw------- 1 boinc boinc        95 Jun 22 00:46 pilot_heartbeat.json
[2024-06-22 00:47:16] -rw------- 1 boinc boinc      1048 Jun 22 00:46 memory_monitor_summary.json
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc       531 Jun 22 00:46 boinc_task_state.xml
[2024-06-22 00:47:16] -rw------- 1 boinc boinc         0 Jun 22 00:46 agis_ddmendpoints.agis.ALL.json
[2024-06-22 00:47:16] -rw------- 1 boinc boinc    352796 Jun 22 00:46 log.40024040._000681.job.log.tgz.1
[2024-06-22 00:47:16] -rw------- 1 boinc boinc      7757 Jun 22 00:46 heartbeat.json
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc      8192 Jun 22 00:47 boinc_mmap_file
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc        28 Jun 22 00:47 wrapper_checkpoint.txt
[2024-06-22 00:47:16] -rw------- 1 boinc boinc      4479 Jun 22 00:47 pilotlog.txt
[2024-06-22 00:47:16] -rw------- 1 boinc boinc   1635922 Jun 22 00:47 log.40024040._000681.job.log.1
[2024-06-22 00:47:16] -rw------- 1 boinc boinc       357 Jun 22 00:47 output.list
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc       620 Jun 22 00:47 runtime_log
[2024-06-22 00:47:16] -rw------- 1 boinc boinc   2007040 Jun 22 00:47 result.tar.gz
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc     11410 Jun 22 00:47 runtime_log.err
[2024-06-22 00:47:16] -rw------- 1 boinc boinc       659 Jun 22 00:47 DKdMDm5GXe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmWmqKDmiIQ1Nn.diag
[2024-06-22 00:47:16] -rw-r--r-- 1 boinc boinc     21306 Jun 22 00:47 stderr.txt
[2024-06-22 00:47:16] HITS file was successfully produced:
[2024-06-22 00:47:16] -rw------- 1 boinc boinc 282746026 Jun 22 00:46 shared/HITS.pool.root.1
[2024-06-22 00:47:16]  *** Contents of shared directory: ***
[2024-06-22 00:47:16] total 874676
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc    482466 Jun 21 20:14 input.tar.gz
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc 610399117 Jun 21 20:14 ATLAS.root_0
[2024-06-22 00:47:16] -rw-r--r-- 2 boinc boinc     17537 Jun 21 20:14 start_atlas.sh
[2024-06-22 00:47:16] -rw------- 1 boinc boinc 282746026 Jun 22 00:46 HITS.pool.root.1
[2024-06-22 00:47:16] -rw------- 1 boinc boinc   2007040 Jun 22 00:47 result.tar.gz
00:47:18 (3981627): run_atlas exited; CPU time 61696.470280
00:47:18 (3981627): called boinc_finish(0)

</stderr_txt>
]]>

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