Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:07:11 (1997702): wrapper (7.7.26015): starting
21:07:11 (1997702): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 21:07:11] Arguments: --nthreads 4
[2024-06-20 21:07:11] Threads: 4
[2024-06-20 21:07:11] Checking for CVMFS
[2024-06-20 21:07:11] No cvmfs_config command found, will try listing directly
[2024-06-20 21:07:11] CVMFS is ok
[2024-06-20 21:07:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 21:07:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 21:07:11] Further information can be found at the LHC@home message board.
[2024-06-20 21:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 21:07:11] Checking for apptainer binary...
[2024-06-20 21:07:11] which: no apptainer in ((null))
[2024-06-20 21:07:11] apptainer is not installed, using version from CVMFS
[2024-06-20 21:07:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 21:07:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-20 21:07:13] apptainer works
[2024-06-20 21:07:13] Set ATHENA_PROC_NUMBER=4
[2024-06-20 21:07:13] Set ATHENA_CORE_NUMBER=4
[2024-06-20 21:07:13] Starting ATLAS job with PandaID=6238851426
[2024-06-20 21:07:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 00:55:52]  *** The last 200 lines of the pilot log: ***
[2024-06-21 00:55:52] 2024-06-20 22:55:29,541 | INFO     | chi2: 2.545777886480588
[2024-06-21 00:55:52] 2024-06-20 22:55:29,541 | INFO     | current chi2=2.545777886480588 (change=-0.03546321639512019 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,541 | INFO     | right removable region: 218
[2024-06-21 00:55:52] 2024-06-20 22:55:29,541 | INFO     | model: linear, x: [1718910789.0, 1718910850.0, 1718910911.0, 1718910972.0, 1718911033.0, 1718911094.0, 1718911155.0, 1718911216.0, 1718911277.0, 1718911338.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,541 | INFO     | sum of square deviations: 3256879670.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,543 | INFO     | sum of deviations: 19990874189.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,543 | INFO     | mean x: 1718917438.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,543 | INFO     | mean y: 2364171.1415525116
[2024-06-21 00:55:52] 2024-06-20 22:55:29,543 | INFO     | -- intersect: -10548428528.036127
[2024-06-21 00:55:52] 2024-06-20 22:55:29,543 | INFO     | intersect: -10548428528.036127
[2024-06-21 00:55:52] 2024-06-20 22:55:29,544 | INFO     | chi2: 0.08776164002096098
[2024-06-21 00:55:52] 2024-06-20 22:55:29,544 | INFO     | current chi2=0.08776164002096098 (change=96.55143665174015 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,544 | INFO     | model: linear, x: [1718911094.0, 1718911155.0, 1718911216.0, 1718911277.0, 1718911338.0, 1718911399.0, 1718911460.0, 1718911521.0, 1718911582.0, 1718911643.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,544 | INFO     | sum of square deviations: 3038856977.5
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | sum of deviations: 11683340736.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | mean x: 1718917590.5
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | mean y: 2369926.429906542
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | -- intersect: -6606266167.868025
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | intersect: -6606266167.868025
[2024-06-21 00:55:52] 2024-06-20 22:55:29,546 | INFO     | chi2: 0.001019552830022689
[2024-06-21 00:55:52] 2024-06-20 22:55:29,547 | INFO     | current chi2=0.001019552830022689 (change=98.838270536217 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,547 | INFO     | model: linear, x: [1718911399.0, 1718911460.0, 1718911521.0, 1718911582.0, 1718911643.0, 1718911704.0, 1718911765.0, 1718911826.0, 1718911887.0, 1718911948.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,547 | INFO     | sum of square deviations: 2830787960.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,548 | INFO     | sum of deviations: 10148628560.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,548 | INFO     | mean x: 1718917743.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,548 | INFO     | mean y: 2371049.186602871
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | -- intersect: -6160103125.989888
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | intersect: -6160103125.989888
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | chi2: 0.0004689728901997557
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | current chi2=0.0004689728901997557 (change=54.002100098204885 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | model: linear, x: [1718911704.0, 1718911765.0, 1718911826.0, 1718911887.0, 1718911948.0, 1718912009.0, 1718912070.0, 1718912131.0, 1718912192.0, 1718912253.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,549 | INFO     | sum of square deviations: 2632440055.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | sum of deviations: 9029397601.500002
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | mean x: 1718917895.5
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | mean y: 2371908.7009803923
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | -- intersect: -5893600192.666825
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | intersect: -5893600192.666825
[2024-06-21 00:55:52] 2024-06-20 22:55:29,551 | INFO     | chi2: 0.00029520948880709636
[2024-06-21 00:55:52] 2024-06-20 22:55:29,552 | INFO     | current chi2=0.00029520948880709636 (change=37.051907482039326 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,552 | INFO     | model: linear, x: [1718912009.0, 1718912070.0, 1718912131.0, 1718912192.0, 1718912253.0, 1718912314.0, 1718912375.0, 1718912436.0, 1718912497.0, 1718912558.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,552 | INFO     | sum of square deviations: 2443580700.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,553 | INFO     | sum of deviations: 8185555839.999999
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | mean x: 1718918048.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | mean y: 2372588.8492462314
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | -- intersect: -5755693705.539066
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | intersect: -5755693705.539066
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | chi2: 0.00024258492193017124
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | current chi2=0.00024258492193017124 (change=17.826177298559827 %)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,554 | INFO     | left removable region: 50
[2024-06-21 00:55:52] 2024-06-20 22:55:29,555 | INFO     | model: linear, x: [1718913534.0, 1718913595.0, 1718913656.0, 1718913717.0, 1718913778.0, 1718913839.0, 1718913900.0, 1718913961.0, 1718914022.0, 1718914083.0, 1718
[2024-06-21 00:55:52] 2024-06-20 22:55:29,555 | INFO     | sum of square deviations: 1470248962.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | sum of deviations: 5140061727.0
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | mean x: 1718918627.5
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | mean y: 2374302.75
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | -- intersect: -6007048643.566027
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | intersect: -6007048643.566027
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | chi2: 0.00021076055073667138
[2024-06-21 00:55:52] 2024-06-20 22:55:29,556 | INFO     | -- intersect: -6007048643.566027
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | current memory leak: 3.50 B/s (using 168 data points, chi2=0.00)
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | ..............................
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . Timing measurements:
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . get job = 0 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . initial setup = 1 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . payload setup = 10 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . stage-in = 0 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,557 | INFO     | . payload execution = 13638 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,558 | INFO     | . stage-out = 0 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,558 | INFO     | . log creation = 0 s
[2024-06-21 00:55:52] 2024-06-20 22:55:29,558 | INFO     | ..............................
[2024-06-21 00:55:52] 2024-06-20 22:55:30,012 | INFO     | 
[2024-06-21 00:55:52] 2024-06-20 22:55:30,012 | INFO     | job summary report
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | --------------------------------------------------
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | PanDA job id: 6238851426
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | task id: 40024040
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | errors: (none)
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | pilot state: finished 
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | transexitcode: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | exeerrorcode: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | exeerrordiag: 
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | exitcode: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | exitmsg: OK
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | cpuconsumptiontime: 52717 s
[2024-06-21 00:55:52] 2024-06-20 22:55:30,013 | INFO     | nevents: 400
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | neventsw: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | pid: 2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | pgrp: 2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | corecount: 4
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | event service: False
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | sizes: {0: 2385939, 1: 2386874, 7: 2387080, 12: 2387108, 13652: 2417110, 13653: 2426092, 13654: 2426276, 13661: 2426446}
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | --------------------------------------------------
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | 
[2024-06-21 00:55:52] 2024-06-20 22:55:30,014 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-06-21 00:55:52] 2024-06-20 22:55:30,042 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,042 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,042 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,042 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,043 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 00:55:52] 2024-06-20 22:55:30,044 | INFO     | job 6238851426 has completed (purged errors)
[2024-06-21 00:55:52] 2024-06-20 22:55:30,044 | INFO     | overall cleanup function is called
[2024-06-21 00:55:52] 2024-06-20 22:55:31,051 | INFO     | --- collectZombieJob: --- 10, [2009898]
[2024-06-21 00:55:52] 2024-06-20 22:55:31,051 | INFO     | zombie collector waiting for pid 2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:31,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 00:55:52] 2024-06-20 22:55:32,057 | INFO     | collected zombie processes
[2024-06-21 00:55:52] 2024-06-20 22:55:32,057 | INFO     | will now attempt to kill all subprocesses of pid=2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:32,327 | INFO     | process IDs to be killed: [2009898] (in reverse order)
[2024-06-21 00:55:52] 2024-06-20 22:55:32,507 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 00:55:52] 2024-06-20 22:55:32,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 00:55:52] 2024-06-20 22:55:32,527 | INFO     | did not find any defunct processes belonging to 2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:32,543 | INFO     | did not find any defunct processes belonging to 2009898
[2024-06-21 00:55:52] 2024-06-20 22:55:32,543 | INFO     | ready for new job
[2024-06-21 00:55:52] 2024-06-20 22:55:32,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 00:55:52] 2024-06-20 22:55:32,545 | INFO     | *************************************
[2024-06-21 00:55:52] 2024-06-20 22:55:32,545 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 00:55:52] 2024-06-20 22:55:32,545 | INFO     | *************************************
[2024-06-21 00:55:52] 2024-06-20 22:55:32,545 | INFO     | 
[2024-06-21 00:55:52] 2024-06-20 22:55:32,550 | INFO     | architecture information:
[2024-06-21 00:55:52] 2024-06-20 22:55:32,550 | INFO     | executing command: cat /etc/os-release
[2024-06-21 00:55:52] 2024-06-20 22:55:32,570 | INFO     | cat /etc/os-release:
[2024-06-21 00:55:52] NAME="CentOS Linux"
[2024-06-21 00:55:52] VERSION="7 (Core)"
[2024-06-21 00:55:52] ID="centos"
[2024-06-21 00:55:52] ID_LIKE="rhel fedora"
[2024-06-21 00:55:52] VERSION_ID="7"
[2024-06-21 00:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 00:55:52] ANSI_COLOR="0;31"
[2024-06-21 00:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 00:55:52] HOME_URL="https://www.centos.org/"
[2024-06-21 00:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 00:55:52] 
[2024-06-21 00:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 00:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 00:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 00:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 00:55:52] 
[2024-06-21 00:55:52] 2024-06-20 22:55:32,571 | INFO     | *************************************
[2024-06-21 00:55:52] 2024-06-20 22:55:33,073 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-06-21 00:55:52] 2024-06-20 22:55:33,092 | INFO     | sufficient remaining disk space (3165543989248 B)
[2024-06-21 00:55:52] 2024-06-20 22:55:33,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 00:55:52] 2024-06-20 22:55:33,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 00:55:52] 2024-06-20 22:55:33,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 00:55:52] 2024-06-20 22:55:33,108 | INFO     | aborting loop
[2024-06-21 00:55:52] 2024-06-20 22:55:33,211 | INFO     | all job control threads have been joined
[2024-06-21 00:55:52] 2024-06-20 22:55:33,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 00:55:52] 2024-06-20 22:55:33,430 | INFO     | all payload control threads have been joined
[2024-06-21 00:55:52] 2024-06-20 22:55:33,495 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 00:55:52] 2024-06-20 22:55:33,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 00:55:52] 2024-06-20 22:55:33,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 00:55:52] 2024-06-20 22:55:33,675 | INFO     | all data control threads have been joined
[2024-06-21 00:55:52] 2024-06-20 22:55:33,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 00:55:52] 2024-06-20 22:55:34,098 | INFO     | [job] retrieve thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,113 | INFO     | [job] job monitor thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,216 | INFO     | [job] control thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,333 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,435 | INFO     | [payload] control thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,562 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 00:55:52] 2024-06-20 22:55:34,680 | INFO     | [data] control thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,710 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:34,780 | INFO     | [data] copytool_in thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:35,360 | INFO     | [payload] validate_post thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:35,386 | INFO     | [payload] failed_post thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:35,496 | INFO     | [job] validate thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:35,652 | INFO     | [job] queue monitor thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:35,929 | INFO     | [data] copytool_out thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:37,245 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:43,675 | INFO     | job.realtimelogging is not enabled
[2024-06-21 00:55:52] 2024-06-20 22:55:44,680 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 00:55:52] 2024-06-20 22:55:46,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46975592842304)>', '<ExcThread(monitor, started 46975775217408)>']
[2024-06-21 00:55:52] 2024-06-20 22:55:46,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 00:55:52] 2024-06-20 22:55:46,556 | INFO     | [monitor] control thread has ended
[2024-06-21 00:55:52] 2024-06-20 22:55:51,271 | INFO     | all workflow threads have been joined
[2024-06-21 00:55:52] 2024-06-20 22:55:51,271 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 00:55:52] 2024-06-20 22:55:51,272 | INFO     | traces error code: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:51,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 00:55:52] 2024-06-20 22:55:51,422 [wrapper] ==== pilot stdout END ====
[2024-06-21 00:55:52] 2024-06-20 22:55:51,424 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 00:55:52] 2024-06-20 22:55:51,426 [wrapper] pilotpid: 2002361
[2024-06-21 00:55:52] 2024-06-20 22:55:51,428 [wrapper] Pilot exit status: 0
[2024-06-21 00:55:52] 2024-06-20 22:55:51,437 [wrapper] pandaids: 6238851426
[2024-06-21 00:55:52] 2024-06-20 22:55:51,529 [wrapper] cleanup supervisor_pilot 3457275 2002362
[2024-06-21 00:55:52] 2024-06-20 22:55:51,532 [wrapper] Test setup, not cleaning
[2024-06-21 00:55:52] 2024-06-20 22:55:51,533 [wrapper] ==== wrapper stdout END ====
[2024-06-21 00:55:52] 2024-06-20 22:55:51,535 [wrapper] ==== wrapper stderr END ====
[2024-06-21 00:55:52] 2024-06-20 22:55:51,540 [wrapper] apfmon messages muted
[2024-06-21 00:55:52]  *** Error codes and diagnostics ***
[2024-06-21 00:55:52]     "exeErrorCode": 0,
[2024-06-21 00:55:52]     "exeErrorDiag": "",
[2024-06-21 00:55:52]     "pilotErrorCode": 0,
[2024-06-21 00:55:52]     "pilotErrorDiag": "",
[2024-06-21 00:55:52]  *** Listing of results directory ***
[2024-06-21 00:55:52] total 876468
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc      5654 Jun 20 15:09 queuedata.json
[2024-06-21 00:55:52] -rwx------ 1 boinc boinc     32308 Jun 20 15:11 runpilot2-wrapper.sh
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc    469766 Jun 20 15:11 pilot3.tar.gz
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc       100 Jun 20 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 00:55:52] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 21:07 run_atlas
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc       105 Jun 20 21:07 job.xml
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc      6642 Jun 20 21:07 init_data.xml
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc 615303616 Jun 20 21:07 EVNT.40024038._000041.pool.root.1
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:07 start_atlas.sh
[2024-06-21 00:55:52] drwxrwx--x 2 boinc boinc      4096 Jun 20 21:07 shared
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc    482470 Jun 20 21:07 input.tar.gz
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc         0 Jun 20 21:07 boinc_lockfile
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc      2480 Jun 20 21:07 pandaJob.out
[2024-06-21 00:55:52] -rw------- 1 boinc boinc       424 Jun 20 21:07 setup.sh.local
[2024-06-21 00:55:52] -rw------- 1 boinc boinc   1020848 Jun 20 21:07 agis_schedconf.cvmfs.json
[2024-06-21 00:55:52] -rw------- 1 boinc boinc   1321251 Jun 20 21:07 cric_ddmendpoints.json
[2024-06-21 00:55:52] drwx------ 4 boinc boinc      4096 Jun 20 21:07 pilot3
[2024-06-21 00:55:52] -rw------- 1 boinc boinc 275229692 Jun 21 00:54 HITS.40024040._000505.pool.root.1
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc       532 Jun 21 00:54 boinc_task_state.xml
[2024-06-21 00:55:52] -rw------- 1 boinc boinc        95 Jun 21 00:55 pilot_heartbeat.json
[2024-06-21 00:55:52] -rw------- 1 boinc boinc      1038 Jun 21 00:55 memory_monitor_summary.json
[2024-06-21 00:55:52] -rw------- 1 boinc boinc         0 Jun 21 00:55 agis_ddmendpoints.agis.ALL.json
[2024-06-21 00:55:52] -rw------- 1 boinc boinc    325837 Jun 21 00:55 log.40024040._000505.job.log.tgz.1
[2024-06-21 00:55:52] -rw------- 1 boinc boinc      7726 Jun 21 00:55 heartbeat.json
[2024-06-21 00:55:52] -rw------- 1 boinc boinc      4294 Jun 21 00:55 pilotlog.txt
[2024-06-21 00:55:52] -rw------- 1 boinc boinc   1392474 Jun 21 00:55 log.40024040._000505.job.log.1
[2024-06-21 00:55:52] -rw------- 1 boinc boinc       357 Jun 21 00:55 output.list
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc       620 Jun 21 00:55 runtime_log
[2024-06-21 00:55:52] -rw------- 1 boinc boinc   1740800 Jun 21 00:55 result.tar.gz
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc     11410 Jun 21 00:55 runtime_log.err
[2024-06-21 00:55:52] -rw------- 1 boinc boinc       658 Jun 21 00:55 8iqLDmTkWe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmsBlKDmR1irKo.diag
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc      8192 Jun 21 00:55 boinc_mmap_file
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc        28 Jun 21 00:55 wrapper_checkpoint.txt
[2024-06-21 00:55:52] -rw-r--r-- 1 boinc boinc     21338 Jun 21 00:55 stderr.txt
[2024-06-21 00:55:52] HITS file was successfully produced:
[2024-06-21 00:55:52] -rw------- 1 boinc boinc 275229692 Jun 21 00:54 shared/HITS.pool.root.1
[2024-06-21 00:55:52]  *** Contents of shared directory: ***
[2024-06-21 00:55:52] total 871864
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc 615303616 Jun 20 21:07 ATLAS.root_0
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:07 start_atlas.sh
[2024-06-21 00:55:52] -rw-r--r-- 2 boinc boinc    482470 Jun 20 21:07 input.tar.gz
[2024-06-21 00:55:52] -rw------- 1 boinc boinc 275229692 Jun 21 00:54 HITS.pool.root.1
[2024-06-21 00:55:52] -rw------- 1 boinc boinc   1740800 Jun 21 00:55 result.tar.gz
00:55:53 (1997702): run_atlas exited; CPU time 52447.734513
00:55:53 (1997702): called boinc_finish(0)

</stderr_txt>
]]>

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