Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:07:11 (2641610): wrapper (7.7.26015): starting
22:07:11 (2641610): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 22:07:11] Arguments: --nthreads 4
[2024-06-20 22:07:11] Threads: 4
[2024-06-20 22:07:11] Checking for CVMFS
[2024-06-20 22:07:11] No cvmfs_config command found, will try listing directly
[2024-06-20 22:07:11] CVMFS is ok
[2024-06-20 22:07:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 22:07:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 22:07:11] Further information can be found at the LHC@home message board.
[2024-06-20 22:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 22:07:11] Checking for apptainer binary...
[2024-06-20 22:07:11] which: no apptainer in ((null))
[2024-06-20 22:07:11] apptainer is not installed, using version from CVMFS
[2024-06-20 22:07:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 22:07:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-20 22:07:12] apptainer works
[2024-06-20 22:07:12] Set ATHENA_PROC_NUMBER=4
[2024-06-20 22:07:12] Set ATHENA_CORE_NUMBER=4
[2024-06-20 22:07:12] Starting ATLAS job with PandaID=6238851266
[2024-06-20 22:07:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 01:55:05]  *** The last 200 lines of the pilot log: ***
[2024-06-21 01:55:05] 2024-06-20 23:54:42,124 | INFO     | current chi2=4.401146866859145 (change=0.018615308933900156 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,124 | INFO     | right removable region: 217
[2024-06-21 01:55:05] 2024-06-20 23:54:42,124 | INFO     | model: linear, x: [1718914383.0, 1718914444.0, 1718914505.0, 1718914566.0, 1718914627.0, 1718914688.0, 1718914749.0, 1718914810.0, 1718914871.0, 1718914932.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,124 | INFO     | sum of square deviations: 3212467674.5
[2024-06-21 01:55:05] 2024-06-20 23:54:42,126 | INFO     | sum of deviations: 56540535769.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,126 | INFO     | mean x: 1718921001.5
[2024-06-21 01:55:05] 2024-06-20 23:54:42,126 | INFO     | mean y: 2343839.8165137614
[2024-06-21 01:55:05] 2024-06-20 23:54:42,126 | INFO     | -- intersect: -30251256886.149654
[2024-06-21 01:55:05] 2024-06-20 23:54:42,126 | INFO     | intersect: -30251256886.149654
[2024-06-21 01:55:05] 2024-06-20 23:54:42,127 | INFO     | chi2: 1.7220812263533034
[2024-06-21 01:55:05] 2024-06-20 23:54:42,127 | INFO     | current chi2=1.7220812263533034 (change=60.879272887304246 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,127 | INFO     | model: linear, x: [1718914688.0, 1718914749.0, 1718914810.0, 1718914871.0, 1718914932.0, 1718914993.0, 1718915054.0, 1718915115.0, 1718915176.0, 1718915237.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,127 | INFO     | sum of square deviations: 2996454322.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,128 | INFO     | sum of deviations: 12174341753.000008
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | mean x: 1718921154.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | mean y: 2375165.079812207
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | -- intersect: -6981456833.163195
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | intersect: -6981456833.163195
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | chi2: 0.08145863280855584
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | current chi2=0.08145863280855584 (change=95.26975664318381 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,129 | INFO     | model: linear, x: [1718914993.0, 1718915054.0, 1718915115.0, 1718915176.0, 1718915237.0, 1718915298.0, 1718915359.0, 1718915420.0, 1718915481.0, 1718915542.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,130 | INFO     | sum of square deviations: 2790348132.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,131 | INFO     | sum of deviations: 5151641112.999999
[2024-06-21 01:55:05] 2024-06-20 23:54:42,131 | INFO     | mean x: 1718921306.5
[2024-06-21 01:55:05] 2024-06-20 23:54:42,131 | INFO     | mean y: 2380303.2115384615
[2024-06-21 01:55:05] 2024-06-20 23:54:42,131 | INFO     | -- intersect: -3171154056.542348
[2024-06-21 01:55:05] 2024-06-20 23:54:42,131 | INFO     | intersect: -3171154056.542348
[2024-06-21 01:55:05] 2024-06-20 23:54:42,132 | INFO     | chi2: 0.00374663881455554
[2024-06-21 01:55:05] 2024-06-20 23:54:42,132 | INFO     | current chi2=0.00374663881455554 (change=95.40056261027496 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,132 | INFO     | model: linear, x: [1718915298.0, 1718915359.0, 1718915420.0, 1718915481.0, 1718915542.0, 1718915603.0, 1718915664.0, 1718915725.0, 1718915786.0, 1718915847.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,132 | INFO     | sum of square deviations: 2593916542.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,133 | INFO     | sum of deviations: 3658036349.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | mean x: 1718921459.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | mean y: 2381459.6896551726
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | -- intersect: -2421704695.8540926
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | intersect: -2421704695.8540926
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | chi2: 0.0024079517008906747
[2024-06-21 01:55:05] 2024-06-20 23:54:42,134 | INFO     | current chi2=0.0024079517008906747 (change=35.730348718539936 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,135 | INFO     | model: linear, x: [1718915603.0, 1718915664.0, 1718915725.0, 1718915786.0, 1718915847.0, 1718915908.0, 1718915969.0, 1718916030.0, 1718916091.0, 1718916152.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,135 | INFO     | sum of square deviations: 2406926989.5
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | sum of deviations: 2801631606.9999995
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | mean x: 1718921611.5
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | mean y: 2382156.6565656564
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | -- intersect: -1998420168.358775
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | intersect: -1998420168.358775
[2024-06-21 01:55:05] 2024-06-20 23:54:42,136 | INFO     | chi2: 0.002027882259815236
[2024-06-21 01:55:05] 2024-06-20 23:54:42,137 | INFO     | current chi2=0.002027882259815236 (change=15.783931253058567 %)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,137 | INFO     | left removable region: 50
[2024-06-21 01:55:05] 2024-06-20 23:54:42,137 | INFO     | model: linear, x: [1718917128.0, 1718917189.0, 1718917250.0, 1718917311.0, 1718917372.0, 1718917433.0, 1718917494.0, 1718917555.0, 1718917616.0, 1718917677.0, 1718
[2024-06-21 01:55:05] 2024-06-20 23:54:42,137 | INFO     | sum of square deviations: 1444149868.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | sum of deviations: -263258432.00000003
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | mean x: 1718922191.0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | mean y: 2385079.5329341316
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | -- intersect: 315732586.43632746
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | intersect: 315732586.43632746
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | chi2: 0.0005070791441929685
[2024-06-21 01:55:05] 2024-06-20 23:54:42,138 | INFO     | -- intersect: 315732586.43632746
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | current memory leak: -0.18 B/s (using 167 data points, chi2=0.00)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | ..............................
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . Timing measurements:
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . get job = 0 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . initial setup = 1 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . payload setup = 8 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . stage-in = 0 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . payload execution = 13598 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,139 | INFO     | . stage-out = 0 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,140 | INFO     | . log creation = 0 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,140 | INFO     | ..............................
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | 
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | job summary report
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | --------------------------------------------------
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | PanDA job id: 6238851266
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | task id: 40024040
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | errors: (none)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 01:55:05] 2024-06-20 23:54:42,282 | INFO     | pilot state: finished 
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | transexitcode: 0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | exeerrorcode: 0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | exeerrordiag: 
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | exitcode: 0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | exitmsg: OK
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | cpuconsumptiontime: 51454 s
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | nevents: 400
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | neventsw: 0
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | pid: 2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | pgrp: 2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | corecount: 4
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | event service: False
[2024-06-21 01:55:05] 2024-06-20 23:54:42,283 | INFO     | sizes: {0: 2386846, 8: 2387052, 11: 2387080, 13611: 2417170, 13612: 2426208, 13619: 2426322}
[2024-06-21 01:55:05] 2024-06-20 23:54:42,284 | INFO     | --------------------------------------------------
[2024-06-21 01:55:05] 2024-06-20 23:54:42,284 | INFO     | 
[2024-06-21 01:55:05] 2024-06-20 23:54:42,284 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-06-21 01:55:05] 2024-06-20 23:54:42,311 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,312 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,313 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 01:55:05] 2024-06-20 23:54:42,313 | INFO     | job 6238851266 has completed (purged errors)
[2024-06-21 01:55:05] 2024-06-20 23:54:42,313 | INFO     | overall cleanup function is called
[2024-06-21 01:55:05] 2024-06-20 23:54:43,320 | INFO     | --- collectZombieJob: --- 10, [2655431]
[2024-06-21 01:55:05] 2024-06-20 23:54:43,320 | INFO     | zombie collector waiting for pid 2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:43,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 01:55:05] 2024-06-20 23:54:44,325 | INFO     | collected zombie processes
[2024-06-21 01:55:05] 2024-06-20 23:54:44,325 | INFO     | will now attempt to kill all subprocesses of pid=2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:44,565 | INFO     | process IDs to be killed: [2655431] (in reverse order)
[2024-06-21 01:55:05] 2024-06-20 23:54:44,724 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 01:55:05] 2024-06-20 23:54:44,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 01:55:05] 2024-06-20 23:54:44,737 | INFO     | did not find any defunct processes belonging to 2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:44,746 | INFO     | did not find any defunct processes belonging to 2655431
[2024-06-21 01:55:05] 2024-06-20 23:54:44,746 | INFO     | ready for new job
[2024-06-21 01:55:05] 2024-06-20 23:54:44,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 01:55:05] 2024-06-20 23:54:44,748 | INFO     | *************************************
[2024-06-21 01:55:05] 2024-06-20 23:54:44,748 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 01:55:05] 2024-06-20 23:54:44,748 | INFO     | *************************************
[2024-06-21 01:55:05] 2024-06-20 23:54:44,748 | INFO     | 
[2024-06-21 01:55:05] 2024-06-20 23:54:44,753 | INFO     | architecture information:
[2024-06-21 01:55:05] 2024-06-20 23:54:44,753 | INFO     | executing command: cat /etc/os-release
[2024-06-21 01:55:05] 2024-06-20 23:54:44,778 | INFO     | cat /etc/os-release:
[2024-06-21 01:55:05] NAME="CentOS Linux"
[2024-06-21 01:55:05] VERSION="7 (Core)"
[2024-06-21 01:55:05] ID="centos"
[2024-06-21 01:55:05] ID_LIKE="rhel fedora"
[2024-06-21 01:55:05] VERSION_ID="7"
[2024-06-21 01:55:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 01:55:05] ANSI_COLOR="0;31"
[2024-06-21 01:55:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 01:55:05] HOME_URL="https://www.centos.org/"
[2024-06-21 01:55:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 01:55:05] 
[2024-06-21 01:55:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 01:55:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 01:55:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 01:55:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 01:55:05] 
[2024-06-21 01:55:05] 2024-06-20 23:54:44,778 | INFO     | *************************************
[2024-06-21 01:55:05] 2024-06-20 23:54:45,280 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-06-21 01:55:05] 2024-06-20 23:54:45,302 | INFO     | sufficient remaining disk space (3169332494336 B)
[2024-06-21 01:55:05] 2024-06-20 23:54:45,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 01:55:05] 2024-06-20 23:54:45,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 01:55:05] 2024-06-20 23:54:45,303 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 01:55:05] 2024-06-20 23:54:45,303 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 01:55:05] 2024-06-20 23:54:45,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 01:55:05] 2024-06-20 23:54:45,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 01:55:05] 2024-06-20 23:54:45,310 | INFO     | all job control threads have been joined
[2024-06-21 01:55:05] 2024-06-20 23:54:45,423 | INFO     | all data control threads have been joined
[2024-06-21 01:55:05] 2024-06-20 23:54:45,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:55:05] 2024-06-20 23:54:45,437 | INFO     | aborting loop
[2024-06-21 01:55:05] 2024-06-20 23:54:45,603 | INFO     | all payload control threads have been joined
[2024-06-21 01:55:05] 2024-06-20 23:54:45,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 01:55:05] 2024-06-20 23:54:45,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 01:55:05] 2024-06-20 23:54:46,308 | INFO     | [job] retrieve thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,315 | INFO     | [job] control thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,354 | INFO     | [data] copytool_in thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,417 | INFO     | [payload] validate_post thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,428 | INFO     | [data] control thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,442 | INFO     | [job] job monitor thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,608 | INFO     | [payload] control thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:46,788 | INFO     | [job] validate thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:47,146 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:47,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:55:05] 2024-06-20 23:54:47,291 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:47,645 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:47,700 | INFO     | [payload] failed_post thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:47,783 | INFO     | [data] copytool_out thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:48,232 | INFO     | [job] queue monitor thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:49,871 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:56,283 | INFO     | job.realtimelogging is not enabled
[2024-06-21 01:55:05] 2024-06-20 23:54:57,288 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 01:55:05] 2024-06-20 23:54:59,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47887890396224)>', '<ExcThread(monitor, started 47888686122752)>']
[2024-06-21 01:55:05] 2024-06-20 23:54:59,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 01:55:05] 2024-06-20 23:54:59,372 | INFO     | [monitor] control thread has ended
[2024-06-21 01:55:05] 2024-06-20 23:55:04,335 | INFO     | all workflow threads have been joined
[2024-06-21 01:55:05] 2024-06-20 23:55:04,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 01:55:05] 2024-06-20 23:55:04,336 | INFO     | traces error code: 0
[2024-06-21 01:55:05] 2024-06-20 23:55:04,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 01:55:05] 2024-06-20 23:55:04,476 [wrapper] ==== pilot stdout END ====
[2024-06-21 01:55:05] 2024-06-20 23:55:04,479 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 01:55:05] 2024-06-20 23:55:04,481 [wrapper] pilotpid: 2647924
[2024-06-21 01:55:05] 2024-06-20 23:55:04,483 [wrapper] Pilot exit status: 0
[2024-06-21 01:55:05] 2024-06-20 23:55:04,492 [wrapper] pandaids: 6238851266
[2024-06-21 01:55:05] 2024-06-20 23:55:04,587 [wrapper] cleanup supervisor_pilot 4111528 2647925
[2024-06-21 01:55:05] 2024-06-20 23:55:04,591 [wrapper] Test setup, not cleaning
[2024-06-21 01:55:05] 2024-06-20 23:55:04,593 [wrapper] ==== wrapper stdout END ====
[2024-06-21 01:55:05] 2024-06-20 23:55:04,595 [wrapper] ==== wrapper stderr END ====
[2024-06-21 01:55:05] 2024-06-20 23:55:04,607 [wrapper] apfmon messages muted
[2024-06-21 01:55:05]  *** Error codes and diagnostics ***
[2024-06-21 01:55:05]     "exeErrorCode": 0,
[2024-06-21 01:55:05]     "exeErrorDiag": "",
[2024-06-21 01:55:05]     "pilotErrorCode": 0,
[2024-06-21 01:55:05]     "pilotErrorDiag": "",
[2024-06-21 01:55:05]  *** Listing of results directory ***
[2024-06-21 01:55:05] total 875236
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:56 queuedata.json
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc    469766 Jun 20 14:56 pilot3.tar.gz
[2024-06-21 01:55:05] -rwx------ 1 boinc boinc     32308 Jun 20 14:58 runpilot2-wrapper.sh
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc       100 Jun 20 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 01:55:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 22:07 run_atlas
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc       105 Jun 20 22:07 job.xml
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc 613404977 Jun 20 22:07 EVNT.40024038._000039.pool.root.1
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:07 start_atlas.sh
[2024-06-21 01:55:05] drwxrwx--x 2 boinc boinc      4096 Jun 20 22:07 shared
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc    482475 Jun 20 22:07 input.tar.gz
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc      6642 Jun 20 22:07 init_data.xml
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc         0 Jun 20 22:07 boinc_lockfile
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc      2480 Jun 20 22:07 pandaJob.out
[2024-06-21 01:55:05] -rw------- 1 boinc boinc       424 Jun 20 22:07 setup.sh.local
[2024-06-21 01:55:05] -rw------- 1 boinc boinc   1024128 Jun 20 22:07 agis_schedconf.cvmfs.json
[2024-06-21 01:55:05] -rw------- 1 boinc boinc   1321251 Jun 20 22:07 cric_ddmendpoints.json
[2024-06-21 01:55:05] drwx------ 4 boinc boinc      4096 Jun 20 22:07 pilot3
[2024-06-21 01:55:05] -rw------- 1 boinc boinc 275892145 Jun 21 01:54 HITS.40024040._000460.pool.root.1
[2024-06-21 01:55:05] -rw------- 1 boinc boinc        95 Jun 21 01:54 pilot_heartbeat.json
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc       532 Jun 21 01:54 boinc_task_state.xml
[2024-06-21 01:55:05] -rw------- 1 boinc boinc      1038 Jun 21 01:54 memory_monitor_summary.json
[2024-06-21 01:55:05] -rw------- 1 boinc boinc         0 Jun 21 01:54 agis_ddmendpoints.agis.ALL.json
[2024-06-21 01:55:05] -rw------- 1 boinc boinc    328934 Jun 21 01:54 log.40024040._000460.job.log.tgz.1
[2024-06-21 01:55:05] -rw------- 1 boinc boinc      7712 Jun 21 01:54 heartbeat.json
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc      8192 Jun 21 01:54 boinc_mmap_file
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc        28 Jun 21 01:54 wrapper_checkpoint.txt
[2024-06-21 01:55:05] -rw------- 1 boinc boinc      4417 Jun 21 01:55 pilotlog.txt
[2024-06-21 01:55:05] -rw------- 1 boinc boinc   1374786 Jun 21 01:55 log.40024040._000460.job.log.1
[2024-06-21 01:55:05] -rw------- 1 boinc boinc       357 Jun 21 01:55 output.list
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc       620 Jun 21 01:55 runtime_log
[2024-06-21 01:55:05] -rw------- 1 boinc boinc   1720320 Jun 21 01:55 result.tar.gz
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc     11410 Jun 21 01:55 runtime_log.err
[2024-06-21 01:55:05] -rw------- 1 boinc boinc       658 Jun 21 01:55 PHFLDmGYWe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmVBlKDmRsgiOn.diag
[2024-06-21 01:55:05] -rw-r--r-- 1 boinc boinc     21382 Jun 21 01:55 stderr.txt
[2024-06-21 01:55:05] HITS file was successfully produced:
[2024-06-21 01:55:05] -rw------- 1 boinc boinc 275892145 Jun 21 01:54 shared/HITS.pool.root.1
[2024-06-21 01:55:05]  *** Contents of shared directory: ***
[2024-06-21 01:55:05] total 870640
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc 613404977 Jun 20 22:07 ATLAS.root_0
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:07 start_atlas.sh
[2024-06-21 01:55:05] -rw-r--r-- 2 boinc boinc    482475 Jun 20 22:07 input.tar.gz
[2024-06-21 01:55:05] -rw------- 1 boinc boinc 275892145 Jun 21 01:54 HITS.pool.root.1
[2024-06-21 01:55:05] -rw------- 1 boinc boinc   1720320 Jun 21 01:55 result.tar.gz
01:55:06 (2641610): run_atlas exited; CPU time 51162.479758
01:55:06 (2641610): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN