Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:54:06 (3367865): wrapper (7.7.26015): starting
01:54:06 (3367865): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 01:54:06] Arguments: --nthreads 4
[2024-06-21 01:54:06] Threads: 4
[2024-06-21 01:54:06] Checking for CVMFS
[2024-06-21 01:54:06] No cvmfs_config command found, will try listing directly
[2024-06-21 01:54:06] CVMFS is ok
[2024-06-21 01:54:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 01:54:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 01:54:06] Further information can be found at the LHC@home message board.
[2024-06-21 01:54:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 01:54:06] Checking for apptainer binary...
[2024-06-21 01:54:06] which: no apptainer in ((null))
[2024-06-21 01:54:06] apptainer is not installed, using version from CVMFS
[2024-06-21 01:54:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 01:54:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-21 01:54:07] apptainer works
[2024-06-21 01:54:07] Set ATHENA_PROC_NUMBER=4
[2024-06-21 01:54:07] Set ATHENA_CORE_NUMBER=4
[2024-06-21 01:54:07] Starting ATLAS job with PandaID=6238851138
[2024-06-21 01:54:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 05:54:39]  *** The last 200 lines of the pilot log: ***
[2024-06-21 05:54:39] 2024-06-21 03:54:26,528 | INFO     | chi2: 0.00016955594635100385
[2024-06-21 05:54:39] 2024-06-21 03:54:26,528 | INFO     | current chi2=0.00016955594635100385 (change=37.49957146825519 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,528 | INFO     | model: linear, x: [1718930730.0, 1718930791.0, 1718930852.0, 1718930913.0, 1718930974.0, 1718931035.0, 1718931096.0, 1718931157.0, 1718931218.0, 1718931279.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,528 | INFO     | sum of square deviations: 1995283922.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,528 | INFO     | sum of deviations: 2230275991.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | mean x: 1718936372.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | mean y: 2375887.005376344
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | -- intersect: -1919006067.347965
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | intersect: -1919006067.347965
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | chi2: 0.00010303833792444361
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | current chi2=0.00010303833792444361 (change=39.230478115382496 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | model: linear, x: [1718931035.0, 1718931096.0, 1718931157.0, 1718931218.0, 1718931279.0, 1718931340.0, 1718931401.0, 1718931462.0, 1718931523.0, 1718931584.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,529 | INFO     | sum of square deviations: 1838657730.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | sum of deviations: 1908049438.9999998
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | mean x: 1718936525.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | mean y: 2376200.817679558
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | -- intersect: -1781433705.0112095
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | intersect: -1781433705.0112095
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | chi2: 7.63068841674159e-05
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | current chi2=7.63068841674159e-05 (change=25.94321132841784 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | model: linear, x: [1718931340.0, 1718931401.0, 1718931462.0, 1718931523.0, 1718931584.0, 1718931645.0, 1718931706.0, 1718931767.0, 1718931828.0, 1718931889.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,530 | INFO     | sum of square deviations: 1690450300.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | sum of deviations: 1626677087.4999998
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | mean x: 1718936677.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | mean y: 2376490.1761363638
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | -- intersect: -1651712309.8037426
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | intersect: -1651712309.8037426
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | chi2: 5.4699104050421395e-05
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | current chi2=5.4699104050421395e-05 (change=28.316947222726895 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | model: linear, x: [1718931645.0, 1718931706.0, 1718931767.0, 1718931828.0, 1718931889.0, 1718931950.0, 1718932011.0, 1718932072.0, 1718932133.0, 1718932194.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,531 | INFO     | sum of square deviations: 1550429070.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | sum of deviations: 1416640332.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | mean x: 1718936830.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | mean y: 2376717.847953216
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | -- intersect: -1568230598.9628878
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | intersect: -1568230598.9628878
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | chi2: 4.0367344556036e-05
[2024-06-21 05:54:39] 2024-06-21 03:54:26,532 | INFO     | current chi2=4.0367344556036e-05 (change=26.20108636729121 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | model: linear, x: [1718931950.0, 1718932011.0, 1718932072.0, 1718932133.0, 1718932194.0, 1718932255.0, 1718932316.0, 1718932377.0, 1718932438.0, 1718932499.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | sum of square deviations: 1418361477.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | sum of deviations: 1296430682.0000002
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | mean x: 1718936982.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | mean y: 2376856.6506024096
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | -- intersect: -1568790070.7432628
[2024-06-21 05:54:39] 2024-06-21 03:54:26,533 | INFO     | intersect: -1568790070.7432628
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | chi2: 4.036472821961898e-05
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | current chi2=4.036472821961898e-05 (change=0.0064813191102735136 %)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | left removable region: 140
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | model: linear, x: [1718936220.0, 1718936281.0, 1718936342.0, 1718936403.0, 1718936464.0, 1718936525.0, 1718936586.0, 1718936647.0, 1718936708.0, 1718936769.0, 1718
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | sum of square deviations: 226022842.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | sum of deviations: 221582683.0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | mean x: 1718938934.5
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | mean y: 2378801.7333333334
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | -- intersect: -1682792027.9347844
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | intersect: -1682792027.9347844
[2024-06-21 05:54:39] 2024-06-21 03:54:26,534 | INFO     | chi2: 2.915886270825914e-05
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | -- intersect: -1682792027.9347844
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | current memory leak: 0.98 B/s (using 90 data points, chi2=0.00)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | ..............................
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . Timing measurements:
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . get job = 0 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . initial setup = 1 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . payload setup = 5 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . stage-in = 0 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . payload execution = 14379 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . stage-out = 0 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | . log creation = 0 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,535 | INFO     | ..............................
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | 
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | job summary report
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | --------------------------------------------------
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | PanDA job id: 6238851138
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | task id: 40024040
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | errors: (none)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 05:54:39] 2024-06-21 03:54:26,596 | INFO     | pilot state: finished 
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | transexitcode: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | exeerrorcode: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | exeerrordiag: 
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | exitcode: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | exitmsg: OK
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | cpuconsumptiontime: 54183 s
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | nevents: 400
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | neventsw: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | pid: 3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | pgrp: 3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | corecount: 4
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | event service: False
[2024-06-21 05:54:39] 2024-06-21 03:54:26,597 | INFO     | sizes: {0: 2386847, 4: 2387053, 11: 2387081, 14388: 2417652, 14389: 2426636, 14392: 2426692, 14396: 2426990}
[2024-06-21 05:54:39] 2024-06-21 03:54:26,598 | INFO     | --------------------------------------------------
[2024-06-21 05:54:39] 2024-06-21 03:54:26,598 | INFO     | 
[2024-06-21 05:54:39] 2024-06-21 03:54:26,598 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-06-21 05:54:39] 2024-06-21 03:54:26,618 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,618 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,618 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,618 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | job 6238851138 has completed (purged errors)
[2024-06-21 05:54:39] 2024-06-21 03:54:26,619 | INFO     | overall cleanup function is called
[2024-06-21 05:54:39] 2024-06-21 03:54:27,626 | INFO     | --- collectZombieJob: --- 10, [3383013]
[2024-06-21 05:54:39] 2024-06-21 03:54:27,626 | INFO     | zombie collector waiting for pid 3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:27,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 05:54:39] 2024-06-21 03:54:28,631 | INFO     | collected zombie processes
[2024-06-21 05:54:39] 2024-06-21 03:54:28,631 | INFO     | will now attempt to kill all subprocesses of pid=3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:28,842 | INFO     | process IDs to be killed: [3383013] (in reverse order)
[2024-06-21 05:54:39] 2024-06-21 03:54:28,989 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 05:54:39] 2024-06-21 03:54:28,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 05:54:39] 2024-06-21 03:54:29,007 | INFO     | did not find any defunct processes belonging to 3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:29,023 | INFO     | did not find any defunct processes belonging to 3383013
[2024-06-21 05:54:39] 2024-06-21 03:54:29,023 | INFO     | ready for new job
[2024-06-21 05:54:39] 2024-06-21 03:54:29,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 05:54:39] 2024-06-21 03:54:29,025 | INFO     | *************************************
[2024-06-21 05:54:39] 2024-06-21 03:54:29,025 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 05:54:39] 2024-06-21 03:54:29,025 | INFO     | *************************************
[2024-06-21 05:54:39] 2024-06-21 03:54:29,025 | INFO     | 
[2024-06-21 05:54:39] 2024-06-21 03:54:29,033 | INFO     | architecture information:
[2024-06-21 05:54:39] 2024-06-21 03:54:29,033 | INFO     | executing command: cat /etc/os-release
[2024-06-21 05:54:39] 2024-06-21 03:54:29,079 | INFO     | cat /etc/os-release:
[2024-06-21 05:54:39] NAME="CentOS Linux"
[2024-06-21 05:54:39] VERSION="7 (Core)"
[2024-06-21 05:54:39] ID="centos"
[2024-06-21 05:54:39] ID_LIKE="rhel fedora"
[2024-06-21 05:54:39] VERSION_ID="7"
[2024-06-21 05:54:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 05:54:39] ANSI_COLOR="0;31"
[2024-06-21 05:54:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 05:54:39] HOME_URL="https://www.centos.org/"
[2024-06-21 05:54:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 05:54:39] 
[2024-06-21 05:54:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 05:54:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 05:54:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 05:54:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 05:54:39] 
[2024-06-21 05:54:39] 2024-06-21 03:54:29,080 | INFO     | *************************************
[2024-06-21 05:54:39] 2024-06-21 03:54:29,583 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-06-21 05:54:39] 2024-06-21 03:54:29,605 | INFO     | sufficient remaining disk space (3171228319744 B)
[2024-06-21 05:54:39] 2024-06-21 03:54:29,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 05:54:39] 2024-06-21 03:54:29,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 05:54:39] 2024-06-21 03:54:29,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 05:54:39] 2024-06-21 03:54:29,875 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 05:54:39] 2024-06-21 03:54:29,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 05:54:39] 2024-06-21 03:54:29,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 05:54:39] 2024-06-21 03:54:29,946 | INFO     | all data control threads have been joined
[2024-06-21 05:54:39] 2024-06-21 03:54:30,078 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 05:54:39] 2024-06-21 03:54:30,078 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 05:54:39] 2024-06-21 03:54:30,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 05:54:39] 2024-06-21 03:54:30,078 | INFO     | will abort loop
[2024-06-21 05:54:39] 2024-06-21 03:54:30,158 | INFO     | all job control threads have been joined
[2024-06-21 05:54:39] 2024-06-21 03:54:30,325 | INFO     | all payload control threads have been joined
[2024-06-21 05:54:39] 2024-06-21 03:54:30,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 05:54:39] 2024-06-21 03:54:30,611 | INFO     | [job] retrieve thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:30,680 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:30,847 | INFO     | [data] copytool_in thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:30,951 | INFO     | [data] control thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,083 | INFO     | [job] job monitor thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,115 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,137 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,164 | INFO     | [job] control thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,164 | INFO     | [payload] validate_post thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,330 | INFO     | [payload] control thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,557 | INFO     | [job] validate thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:31,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 05:54:39] 2024-06-21 03:54:31,920 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:32,001 | INFO     | [payload] failed_post thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:32,405 | INFO     | [data] copytool_out thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:32,610 | INFO     | [job] queue monitor thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:33,612 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 05:54:39] 2024-06-21 03:54:33,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47585700062272)>', '<ExcThread(monitor, started 47585884538624)>']
[2024-06-21 05:54:39] 2024-06-21 03:54:33,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 05:54:39] 2024-06-21 03:54:33,890 | INFO     | [monitor] control thread has ended
[2024-06-21 05:54:39] 2024-06-21 03:54:38,737 | INFO     | all workflow threads have been joined
[2024-06-21 05:54:39] 2024-06-21 03:54:38,737 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 05:54:39] 2024-06-21 03:54:38,737 | INFO     | traces error code: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:38,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 05:54:39] 2024-06-21 03:54:38,837 [wrapper] ==== pilot stdout END ====
[2024-06-21 05:54:39] 2024-06-21 03:54:38,842 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 05:54:39] 2024-06-21 03:54:38,852 [wrapper] pilotpid: 3372513
[2024-06-21 05:54:39] 2024-06-21 03:54:38,858 [wrapper] Pilot exit status: 0
[2024-06-21 05:54:39] 2024-06-21 03:54:38,867 [wrapper] pandaids: 6238851138
[2024-06-21 05:54:39] 2024-06-21 03:54:38,968 [wrapper] cleanup supervisor_pilot  340033 3372514
[2024-06-21 05:54:39] 2024-06-21 03:54:38,971 [wrapper] Test setup, not cleaning
[2024-06-21 05:54:39] 2024-06-21 03:54:38,973 [wrapper] ==== wrapper stdout END ====
[2024-06-21 05:54:39] 2024-06-21 03:54:38,975 [wrapper] ==== wrapper stderr END ====
[2024-06-21 05:54:39] 2024-06-21 03:54:38,980 [wrapper] apfmon messages muted
[2024-06-21 05:54:39]  *** Error codes and diagnostics ***
[2024-06-21 05:54:39]     "exeErrorCode": 0,
[2024-06-21 05:54:39]     "exeErrorDiag": "",
[2024-06-21 05:54:39]     "pilotErrorCode": 0,
[2024-06-21 05:54:39]     "pilotErrorDiag": "",
[2024-06-21 05:54:39]  *** Listing of results directory ***
[2024-06-21 05:54:39] total 877892
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:59 pilot3.tar.gz
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:31 queuedata.json
[2024-06-21 05:54:39] -rwx------ 1 boinc boinc     32308 Jun 20 14:32 runpilot2-wrapper.sh
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc       100 Jun 21 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 05:54:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 01:53 run_atlas
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc       105 Jun 21 01:53 job.xml
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc      6644 Jun 21 01:54 init_data.xml
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc 614877104 Jun 21 01:54 EVNT.40024038._000034.pool.root.1
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:54 start_atlas.sh
[2024-06-21 05:54:39] drwxrwx--x 2 boinc boinc      4096 Jun 21 01:54 shared
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc    482482 Jun 21 01:54 input.tar.gz
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc         0 Jun 21 01:54 boinc_lockfile
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc      2480 Jun 21 01:54 pandaJob.out
[2024-06-21 05:54:39] -rw------- 1 boinc boinc       424 Jun 21 01:54 setup.sh.local
[2024-06-21 05:54:39] -rw------- 1 boinc boinc   1024126 Jun 21 01:54 agis_schedconf.cvmfs.json
[2024-06-21 05:54:39] -rw------- 1 boinc boinc   1321251 Jun 21 01:54 cric_ddmendpoints.json
[2024-06-21 05:54:39] drwx------ 4 boinc boinc      4096 Jun 21 01:54 pilot3
[2024-06-21 05:54:39] -rw------- 1 boinc boinc 276689614 Jun 21 05:53 HITS.40024040._000350.pool.root.1
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc       531 Jun 21 05:53 boinc_task_state.xml
[2024-06-21 05:54:39] -rw------- 1 boinc boinc        95 Jun 21 05:54 pilot_heartbeat.json
[2024-06-21 05:54:39] -rw------- 1 boinc boinc      1035 Jun 21 05:54 memory_monitor_summary.json
[2024-06-21 05:54:39] -rw------- 1 boinc boinc         0 Jun 21 05:54 agis_ddmendpoints.agis.ALL.json
[2024-06-21 05:54:39] -rw------- 1 boinc boinc    358102 Jun 21 05:54 log.40024040._000350.job.log.tgz.1
[2024-06-21 05:54:39] -rw------- 1 boinc boinc      7709 Jun 21 05:54 heartbeat.json
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc      8192 Jun 21 05:54 boinc_mmap_file
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc        28 Jun 21 05:54 wrapper_checkpoint.txt
[2024-06-21 05:54:39] -rw------- 1 boinc boinc      4409 Jun 21 05:54 pilotlog.txt
[2024-06-21 05:54:39] -rw------- 1 boinc boinc   1572290 Jun 21 05:54 log.40024040._000350.job.log.1
[2024-06-21 05:54:39] -rw------- 1 boinc boinc       357 Jun 21 05:54 output.list
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc       620 Jun 21 05:54 runtime_log
[2024-06-21 05:54:39] -rw------- 1 boinc boinc   1945600 Jun 21 05:54 result.tar.gz
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc     11429 Jun 21 05:54 runtime_log.err
[2024-06-21 05:54:39] -rw------- 1 boinc boinc       658 Jun 21 05:54 josMDmB9Ve5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmJAlKDmNHbtRn.diag
[2024-06-21 05:54:39] -rw-r--r-- 1 boinc boinc     21408 Jun 21 05:54 stderr.txt
[2024-06-21 05:54:39] HITS file was successfully produced:
[2024-06-21 05:54:39] -rw------- 1 boinc boinc 276689614 Jun 21 05:53 shared/HITS.pool.root.1
[2024-06-21 05:54:39]  *** Contents of shared directory: ***
[2024-06-21 05:54:39] total 873076
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc 614877104 Jun 21 01:54 ATLAS.root_0
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:54 start_atlas.sh
[2024-06-21 05:54:39] -rw-r--r-- 2 boinc boinc    482482 Jun 21 01:54 input.tar.gz
[2024-06-21 05:54:39] -rw------- 1 boinc boinc 276689614 Jun 21 05:53 HITS.pool.root.1
[2024-06-21 05:54:39] -rw------- 1 boinc boinc   1945600 Jun 21 05:54 result.tar.gz
05:54:40 (3367865): run_atlas exited; CPU time 53872.561882
05:54:40 (3367865): called boinc_finish(0)

</stderr_txt>
]]>

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