Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:54:04 (335345): wrapper (7.7.26015): starting
05:54:04 (335345): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:54:04] Arguments: --nthreads 4
[2024-06-21 05:54:04] Threads: 4
[2024-06-21 05:54:04] Checking for CVMFS
[2024-06-21 05:54:04] No cvmfs_config command found, will try listing directly
[2024-06-21 05:54:04] CVMFS is ok
[2024-06-21 05:54:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:54:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:54:04] Further information can be found at the LHC@home message board.
[2024-06-21 05:54:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:54:04] Checking for apptainer binary...
[2024-06-21 05:54:04] which: no apptainer in ((null))
[2024-06-21 05:54:04] apptainer is not installed, using version from CVMFS
[2024-06-21 05:54:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:54:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-21 05:54:05] apptainer works
[2024-06-21 05:54:05] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:54:05] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:54:05] Starting ATLAS job with PandaID=6238851123
[2024-06-21 05:54:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 09:50:40]  *** The last 200 lines of the pilot log: ***
[2024-06-21 09:50:40] 2024-06-21 07:50:24,263 | INFO     | chi2: 4.252794279934643
[2024-06-21 09:50:40] 2024-06-21 07:50:24,263 | INFO     | current chi2=4.252794279934643 (change=0.01458104285910815 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,263 | INFO     | right removable region: 226
[2024-06-21 09:50:40] 2024-06-21 07:50:24,263 | INFO     | model: linear, x: [1718942387.0, 1718942448.0, 1718942509.0, 1718942570.0, 1718942631.0, 1718942692.0, 1718942753.0, 1718942814.0, 1718942875.0, 1718942936.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,264 | INFO     | sum of square deviations: 3627000098.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,265 | INFO     | sum of deviations: 60248258021.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,265 | INFO     | mean x: 1718949280.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,265 | INFO     | mean y: 2331946.7621145374
[2024-06-21 09:50:40] 2024-06-21 07:50:24,265 | INFO     | -- intersect: -28551210084.725353
[2024-06-21 09:50:40] 2024-06-21 07:50:24,265 | INFO     | intersect: -28551210084.725353
[2024-06-21 09:50:40] 2024-06-21 07:50:24,266 | INFO     | chi2: 1.6530926256091607
[2024-06-21 09:50:40] 2024-06-21 07:50:24,266 | INFO     | current chi2=1.6530926256091607 (change=61.13492732852526 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,266 | INFO     | model: linear, x: [1718942692.0, 1718942753.0, 1718942814.0, 1718942875.0, 1718942936.0, 1718942997.0, 1718943058.0, 1718943119.0, 1718943180.0, 1718943241.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,266 | INFO     | sum of square deviations: 3392567795.5
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | sum of deviations: 14755255962.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | mean x: 1718949432.5
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | mean y: 2361543.126126126
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | -- intersect: -7473845386.596862
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | intersect: -7473845386.596862
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | chi2: 0.05492122077916749
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | current chi2=0.05492122077916749 (change=96.67766827288767 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,268 | INFO     | model: linear, x: [1718942997.0, 1718943058.0, 1718943119.0, 1718943180.0, 1718943241.0, 1718943302.0, 1718943363.0, 1718943424.0, 1718943485.0, 1718943546.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,269 | INFO     | sum of square deviations: 3168461268.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,269 | INFO     | sum of deviations: 8385950966.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | mean x: 1718949585.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | mean y: 2365832.2995391707
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | -- intersect: -4547169640.461698
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | intersect: -4547169640.461698
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | chi2: 0.0009820673324853033
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | current chi2=0.0009820673324853033 (change=98.21186179303243 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | model: linear, x: [1718943302.0, 1718943363.0, 1718943424.0, 1718943485.0, 1718943546.0, 1718943607.0, 1718943668.0, 1718943729.0, 1718943790.0, 1718943851.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,270 | INFO     | sum of square deviations: 2954447953.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | sum of deviations: 7273736197.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | mean x: 1718949737.5
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | mean y: 2366621.0094339624
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | -- intersect: -4229620919.6007957
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | intersect: -4229620919.6007957
[2024-06-21 09:50:40] 2024-06-21 07:50:24,271 | INFO     | chi2: 0.0005721331603704785
[2024-06-21 09:50:40] 2024-06-21 07:50:24,272 | INFO     | current chi2=0.0005721331603704785 (change=41.74196193629723 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,272 | INFO     | model: linear, x: [1718943607.0, 1718943668.0, 1718943729.0, 1718943790.0, 1718943851.0, 1718943912.0, 1718943973.0, 1718944034.0, 1718944095.0, 1718944156.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,272 | INFO     | sum of square deviations: 2750295288.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | sum of deviations: 6562933697.000001
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | mean x: 1718949890.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | mean y: 2367152.6231884058
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | -- intersect: -4099503001.377324
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | intersect: -4099503001.377324
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | chi2: 0.0005209841130557365
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | current chi2=0.0005209841130557365 (change=8.940059912210119 %)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | left removable region: 50
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | model: linear, x: [1718945132.0, 1718945193.0, 1718945254.0, 1718945315.0, 1718945376.0, 1718945437.0, 1718945498.0, 1718945559.0, 1718945620.0, 1718945681.0, 1718
[2024-06-21 09:50:40] 2024-06-21 07:50:24,273 | INFO     | sum of square deviations: 1690450300.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | sum of deviations: 3222119735.0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | mean x: 1718950469.5
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | mean y: 2369674.409090909
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | -- intersect: -3274073431.4683585
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | intersect: -3274073431.4683585
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | chi2: 0.00017115930677169777
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | -- intersect: -3274073431.4683585
[2024-06-21 09:50:40] 2024-06-21 07:50:24,274 | INFO     | current memory leak: 1.91 B/s (using 176 data points, chi2=0.00)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | ..............................
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . Timing measurements:
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . get job = 0 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . initial setup = 1 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . payload setup = 5 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . stage-in = 0 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . payload execution = 14136 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . stage-out = 1 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | . log creation = 0 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,275 | INFO     | ..............................
[2024-06-21 09:50:40] 2024-06-21 07:50:24,339 | INFO     | 
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | job summary report
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | --------------------------------------------------
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | PanDA job id: 6238851123
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | task id: 40024040
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | errors: (none)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | pilot state: finished 
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | transexitcode: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | exeerrorcode: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | exeerrordiag: 
[2024-06-21 09:50:40] 2024-06-21 07:50:24,340 | INFO     | exitcode: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | exitmsg: OK
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | cpuconsumptiontime: 53506 s
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | nevents: 400
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | neventsw: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | pid: 349816
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | pgrp: 349816
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | corecount: 4
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | event service: False
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | sizes: {0: 2386676, 1: 2386875, 5: 2387081, 11: 2387137, 14145: 2417618, 14147: 2426784, 14153: 2426898}
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | --------------------------------------------------
[2024-06-21 09:50:40] 2024-06-21 07:50:24,341 | INFO     | 
[2024-06-21 09:50:40] 2024-06-21 07:50:24,342 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-21 09:50:40] 2024-06-21 07:50:24,366 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,366 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | job 6238851123 has completed (purged errors)
[2024-06-21 09:50:40] 2024-06-21 07:50:24,368 | INFO     | overall cleanup function is called
[2024-06-21 09:50:40] 2024-06-21 07:50:25,376 | INFO     | --- collectZombieJob: --- 10, [349816]
[2024-06-21 09:50:40] 2024-06-21 07:50:25,376 | INFO     | zombie collector waiting for pid 349816
[2024-06-21 09:50:40] 2024-06-21 07:50:25,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 09:50:40] 2024-06-21 07:50:26,381 | INFO     | collected zombie processes
[2024-06-21 09:50:40] 2024-06-21 07:50:26,381 | INFO     | will now attempt to kill all subprocesses of pid=349816
[2024-06-21 09:50:40] 2024-06-21 07:50:26,594 | INFO     | process IDs to be killed: [349816] (in reverse order)
[2024-06-21 09:50:40] 2024-06-21 07:50:26,776 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 09:50:40] 2024-06-21 07:50:26,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 09:50:40] 2024-06-21 07:50:26,793 | INFO     | did not find any defunct processes belonging to 349816
[2024-06-21 09:50:40] 2024-06-21 07:50:26,802 | INFO     | did not find any defunct processes belonging to 349816
[2024-06-21 09:50:40] 2024-06-21 07:50:26,802 | INFO     | ready for new job
[2024-06-21 09:50:40] 2024-06-21 07:50:26,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 09:50:40] 2024-06-21 07:50:26,804 | INFO     | *************************************
[2024-06-21 09:50:40] 2024-06-21 07:50:26,804 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 09:50:40] 2024-06-21 07:50:26,804 | INFO     | *************************************
[2024-06-21 09:50:40] 2024-06-21 07:50:26,804 | INFO     | 
[2024-06-21 09:50:40] 2024-06-21 07:50:26,809 | INFO     | architecture information:
[2024-06-21 09:50:40] 2024-06-21 07:50:26,809 | INFO     | executing command: cat /etc/os-release
[2024-06-21 09:50:40] 2024-06-21 07:50:26,825 | INFO     | cat /etc/os-release:
[2024-06-21 09:50:40] NAME="CentOS Linux"
[2024-06-21 09:50:40] VERSION="7 (Core)"
[2024-06-21 09:50:40] ID="centos"
[2024-06-21 09:50:40] ID_LIKE="rhel fedora"
[2024-06-21 09:50:40] VERSION_ID="7"
[2024-06-21 09:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 09:50:40] ANSI_COLOR="0;31"
[2024-06-21 09:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 09:50:40] HOME_URL="https://www.centos.org/"
[2024-06-21 09:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 09:50:40] 
[2024-06-21 09:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 09:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 09:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 09:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 09:50:40] 
[2024-06-21 09:50:40] 2024-06-21 07:50:26,826 | INFO     | *************************************
[2024-06-21 09:50:40] 2024-06-21 07:50:27,329 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-21 09:50:40] 2024-06-21 07:50:27,351 | INFO     | sufficient remaining disk space (3175830519808 B)
[2024-06-21 09:50:40] 2024-06-21 07:50:27,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 09:50:40] 2024-06-21 07:50:27,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 09:50:40] 2024-06-21 07:50:27,352 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 09:50:40] 2024-06-21 07:50:27,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 09:50:40] 2024-06-21 07:50:27,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 09:50:40] 2024-06-21 07:50:27,354 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 09:50:40] 2024-06-21 07:50:27,354 | INFO     | aborting loop
[2024-06-21 09:50:40] 2024-06-21 07:50:27,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 09:50:40] 2024-06-21 07:50:27,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 09:50:40] 2024-06-21 07:50:27,422 | INFO     | all payload control threads have been joined
[2024-06-21 09:50:40] 2024-06-21 07:50:27,672 | INFO     | all data control threads have been joined
[2024-06-21 09:50:40] 2024-06-21 07:50:28,357 | INFO     | [job] retrieve thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:28,360 | INFO     | [job] job monitor thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:28,386 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:28,427 | INFO     | [payload] control thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:28,677 | INFO     | [data] control thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:28,972 | INFO     | all job control threads have been joined
[2024-06-21 09:50:40] 2024-06-21 07:50:29,053 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,064 | INFO     | [payload] failed_post thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 09:50:40] 2024-06-21 07:50:29,174 | INFO     | [job] validate thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,242 | INFO     | [payload] validate_post thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,350 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 09:50:40] 2024-06-21 07:50:29,357 | INFO     | [data] copytool_out thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,383 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,469 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,564 | INFO     | [data] copytool_in thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:29,977 | INFO     | [job] control thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:30,355 | INFO     | [job] queue monitor thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:33,159 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 09:50:40] 2024-06-21 07:50:34,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47143644079168)>', '<ExcThread(monitor, started 47143828555520)>']
[2024-06-21 09:50:40] 2024-06-21 07:50:34,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 09:50:40] 2024-06-21 07:50:34,393 | INFO     | [monitor] control thread has ended
[2024-06-21 09:50:40] 2024-06-21 07:50:39,029 | INFO     | all workflow threads have been joined
[2024-06-21 09:50:40] 2024-06-21 07:50:39,029 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 09:50:40] 2024-06-21 07:50:39,029 | INFO     | traces error code: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:39,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 09:50:40] 2024-06-21 07:50:39,172 [wrapper] ==== pilot stdout END ====
[2024-06-21 09:50:40] 2024-06-21 07:50:39,174 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 09:50:40] 2024-06-21 07:50:39,180 [wrapper] pilotpid: 339970
[2024-06-21 09:50:40] 2024-06-21 07:50:39,183 [wrapper] Pilot exit status: 0
[2024-06-21 09:50:40] 2024-06-21 07:50:39,201 [wrapper] pandaids: 6238851123
[2024-06-21 09:50:40] 2024-06-21 07:50:39,298 [wrapper] cleanup supervisor_pilot 1384033 339971
[2024-06-21 09:50:40] 2024-06-21 07:50:39,302 [wrapper] Test setup, not cleaning
[2024-06-21 09:50:40] 2024-06-21 07:50:39,305 [wrapper] ==== wrapper stdout END ====
[2024-06-21 09:50:40] 2024-06-21 07:50:39,309 [wrapper] ==== wrapper stderr END ====
[2024-06-21 09:50:40] 2024-06-21 07:50:39,318 [wrapper] apfmon messages muted
[2024-06-21 09:50:40]  *** Error codes and diagnostics ***
[2024-06-21 09:50:40]     "exeErrorCode": 0,
[2024-06-21 09:50:40]     "exeErrorDiag": "",
[2024-06-21 09:50:40]     "pilotErrorCode": 0,
[2024-06-21 09:50:40]     "pilotErrorDiag": "",
[2024-06-21 09:50:40]  *** Listing of results directory ***
[2024-06-21 09:50:40] total 878772
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:59 pilot3.tar.gz
[2024-06-21 09:50:40] -rwx------ 1 boinc boinc     32308 Jun 20 14:31 runpilot2-wrapper.sh
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:31 queuedata.json
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 09:50:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:53 run_atlas
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:53 job.xml
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc 614877104 Jun 21 05:54 EVNT.40024038._000034.pool.root.1
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:54 start_atlas.sh
[2024-06-21 09:50:40] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:54 shared
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc    482468 Jun 21 05:54 input.tar.gz
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc      6642 Jun 21 05:54 init_data.xml
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:54 boinc_lockfile
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc      2481 Jun 21 05:54 pandaJob.out
[2024-06-21 09:50:40] -rw------- 1 boinc boinc       424 Jun 21 05:54 setup.sh.local
[2024-06-21 09:50:40] -rw------- 1 boinc boinc   1024126 Jun 21 05:54 agis_schedconf.cvmfs.json
[2024-06-21 09:50:40] -rw------- 1 boinc boinc   1321251 Jun 21 05:54 cric_ddmendpoints.json
[2024-06-21 09:50:40] drwx------ 4 boinc boinc      4096 Jun 21 05:54 pilot3
[2024-06-21 09:50:40] -rw------- 1 boinc boinc 277964411 Jun 21 09:49 HITS.40024040._000336.pool.root.1
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc       531 Jun 21 09:50 boinc_task_state.xml
[2024-06-21 09:50:40] -rw------- 1 boinc boinc        95 Jun 21 09:50 pilot_heartbeat.json
[2024-06-21 09:50:40] -rw------- 1 boinc boinc      1036 Jun 21 09:50 memory_monitor_summary.json
[2024-06-21 09:50:40] -rw------- 1 boinc boinc         0 Jun 21 09:50 agis_ddmendpoints.agis.ALL.json
[2024-06-21 09:50:40] -rw------- 1 boinc boinc    334483 Jun 21 09:50 log.40024040._000336.job.log.tgz.1
[2024-06-21 09:50:40] -rw------- 1 boinc boinc      7704 Jun 21 09:50 heartbeat.json
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc      8192 Jun 21 09:50 boinc_mmap_file
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc        28 Jun 21 09:50 wrapper_checkpoint.txt
[2024-06-21 09:50:40] -rw------- 1 boinc boinc      4345 Jun 21 09:50 pilotlog.txt
[2024-06-21 09:50:40] -rw------- 1 boinc boinc   1408835 Jun 21 09:50 log.40024040._000336.job.log.1
[2024-06-21 09:50:40] -rw------- 1 boinc boinc       357 Jun 21 09:50 output.list
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc       620 Jun 21 09:50 runtime_log
[2024-06-21 09:50:40] -rw------- 1 boinc boinc   1761280 Jun 21 09:50 result.tar.gz
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc     11410 Jun 21 09:50 runtime_log.err
[2024-06-21 09:50:40] -rw------- 1 boinc boinc       657 Jun 21 09:50 VSINDmC8Ve5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmz9kKDmQhScJo.diag
[2024-06-21 09:50:40] -rw-r--r-- 1 boinc boinc     21357 Jun 21 09:50 stderr.txt
[2024-06-21 09:50:40] HITS file was successfully produced:
[2024-06-21 09:50:40] -rw------- 1 boinc boinc 277964411 Jun 21 09:49 shared/HITS.pool.root.1
[2024-06-21 09:50:40]  *** Contents of shared directory: ***
[2024-06-21 09:50:40] total 874140
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc 614877104 Jun 21 05:54 ATLAS.root_0
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:54 start_atlas.sh
[2024-06-21 09:50:40] -rw-r--r-- 2 boinc boinc    482468 Jun 21 05:54 input.tar.gz
[2024-06-21 09:50:40] -rw------- 1 boinc boinc 277964411 Jun 21 09:49 HITS.pool.root.1
[2024-06-21 09:50:40] -rw------- 1 boinc boinc   1761280 Jun 21 09:50 result.tar.gz
09:50:41 (335345): run_atlas exited; CPU time 53188.220804
09:50:41 (335345): called boinc_finish(0)

</stderr_txt>
]]>

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