Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:39 (795864): wrapper (7.7.26015): starting
21:51:39 (795864): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 21:51:39] Arguments: --nthreads 4
[2024-06-21 21:51:39] Threads: 4
[2024-06-21 21:51:39] Checking for CVMFS
[2024-06-21 21:51:39] No cvmfs_config command found, will try listing directly
[2024-06-21 21:51:39] CVMFS is ok
[2024-06-21 21:51:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 21:51:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 21:51:39] Further information can be found at the LHC@home message board.
[2024-06-21 21:51:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 21:51:39] Checking for apptainer binary...
[2024-06-21 21:51:39] which: no apptainer in ((null))
[2024-06-21 21:51:39] apptainer is not installed, using version from CVMFS
[2024-06-21 21:51:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 21:51:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-21 21:51:40] apptainer works
[2024-06-21 21:51:40] Set ATHENA_PROC_NUMBER=4
[2024-06-21 21:51:40] Set ATHENA_CORE_NUMBER=4
[2024-06-21 21:51:40] Starting ATLAS job with PandaID=6238851098
[2024-06-21 21:51:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 01:55:08]  *** The last 200 lines of the pilot log: ***
[2024-06-22 01:55:08] 2024-06-21 23:54:46,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 01:55:08] 2024-06-21 23:54:46,562 | INFO     | fitting pss+swap vs Time
[2024-06-22 01:55:08] 2024-06-21 23:54:46,562 | INFO     | model: linear, x: [1718999553.0, 1718999614.0, 1718999675.0, 1718999736.0, 1718999797.0, 1718999858.0, 1718999919.0, 1718999980.0, 1719000041.0, 1719000102.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,562 | INFO     | sum of square deviations: 4233158440.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | sum of deviations: 99710725294.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | mean x: 1719006812.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | mean y: 2295664.1171548115
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | -- intersect: -40488373050.33963
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | intersect: -40488373050.33963
[2024-06-22 01:55:08] 2024-06-21 23:54:46,564 | INFO     | chi2: 4.986374266839904
[2024-06-22 01:55:08] 2024-06-21 23:54:46,565 | INFO     | model: linear, x: [1718999553.0, 1718999614.0, 1718999675.0, 1718999736.0, 1718999797.0, 1718999858.0, 1718999919.0, 1718999980.0, 1719000041.0, 1719000102.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,565 | INFO     | sum of square deviations: 3972995422.5
[2024-06-22 01:55:08] 2024-06-21 23:54:46,566 | INFO     | sum of deviations: 112601240078.49998
[2024-06-22 01:55:08] 2024-06-21 23:54:46,566 | INFO     | mean x: 1719006659.5
[2024-06-22 01:55:08] 2024-06-21 23:54:46,566 | INFO     | mean y: 2303066.0384615385
[2024-06-22 01:55:08] 2024-06-21 23:54:46,566 | INFO     | -- intersect: -48717179585.945335
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | intersect: -48717179585.945335
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | chi2: 4.182782739437608
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | current chi2=4.182782739437608 (change=16.115748325317128 %)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | right removable region: 233
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | model: linear, x: [1718999858.0, 1718999919.0, 1718999980.0, 1719000041.0, 1719000102.0, 1719000163.0, 1719000224.0, 1719000285.0, 1719000346.0, 1719000407.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,567 | INFO     | sum of square deviations: 3972995422.5
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | sum of deviations: 43209254260.499985
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | mean x: 1719006964.5
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | mean y: 2328705.7564102565
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | -- intersect: -18693139349.40488
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | intersect: -18693139349.40488
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | chi2: 2.446270055185652
[2024-06-22 01:55:08] 2024-06-21 23:54:46,569 | INFO     | current chi2=2.446270055185652 (change=50.94090567060528 %)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,570 | INFO     | model: linear, x: [1719000163.0, 1719000224.0, 1719000285.0, 1719000346.0, 1719000407.0, 1719000468.0, 1719000529.0, 1719000590.0, 1719000651.0, 1719000712.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,570 | INFO     | sum of square deviations: 3723716330.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | sum of deviations: -2818029017.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | mean x: 1719007117.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | mean y: 2356866.8340611355
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | -- intersect: 1303264752.085222
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | intersect: 1303264752.085222
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | chi2: 0.9031002974695028
[2024-06-22 01:55:08] 2024-06-21 23:54:46,571 | INFO     | current chi2=0.9031002974695028 (change=63.08255928019506 %)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,572 | INFO     | model: linear, x: [1719000468.0, 1719000529.0, 1719000590.0, 1719000651.0, 1719000712.0, 1719000773.0, 1719000834.0, 1719000895.0, 1719000956.0, 1719001017.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,572 | INFO     | sum of square deviations: 3485088600.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,572 | INFO     | sum of deviations: -8883205947.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | mean x: 1719007269.5
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | mean y: 2360696.3928571427
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | -- intersect: 4383969703.222306
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | intersect: 4383969703.222306
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | chi2: 0.8428812262930548
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | current chi2=0.8428812262930548 (change=6.668038018056521 %)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | left removable region: 30
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | model: linear, x: [1719001383.0, 1719001444.0, 1719001505.0, 1719001566.0, 1719001627.0, 1719001688.0, 1719001749.0, 1719001810.0, 1719001871.0, 1719001932.0, 1719
[2024-06-22 01:55:08] 2024-06-21 23:54:46,573 | INFO     | sum of square deviations: 2593916542.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | sum of deviations: 3801637790.999999
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | mean x: 1719007544.0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | mean y: 2371208.285714286
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | -- intersect: -2517002077.813054
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | intersect: -2517002077.813054
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | chi2: 0.0002521443253959139
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | -- intersect: -2517002077.813054
[2024-06-22 01:55:08] 2024-06-21 23:54:46,574 | INFO     | current memory leak: 1.47 B/s (using 203 data points, chi2=0.00)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | ..............................
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . Timing measurements:
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . get job = 0 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . initial setup = 1 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . payload setup = 10 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . stage-in = 0 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . payload execution = 14527 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . stage-out = 0 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | . log creation = 0 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,575 | INFO     | ..............................
[2024-06-22 01:55:08] 2024-06-21 23:54:46,637 | INFO     | 
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | job summary report
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | --------------------------------------------------
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | PanDA job id: 6238851098
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | task id: 40024040
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | errors: (none)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | pilot state: finished 
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | transexitcode: 0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | exeerrorcode: 0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | exeerrordiag: 
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | exitcode: 0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,638 | INFO     | exitmsg: OK
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | cpuconsumptiontime: 54634 s
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | nevents: 400
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | neventsw: 0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | pid: 808280
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | pgrp: 808280
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | corecount: 4
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | event service: False
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | sizes: {0: 2386816, 1: 2386816, 9: 2387050, 11: 2387078, 14542: 2417531, 14543: 2426697, 14552: 2426811}
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | --------------------------------------------------
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | 
[2024-06-22 01:55:08] 2024-06-21 23:54:46,639 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-06-22 01:55:08] 2024-06-21 23:54:46,670 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,672 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 01:55:08] 2024-06-21 23:54:46,673 | INFO     | job 6238851098 has completed (purged errors)
[2024-06-22 01:55:08] 2024-06-21 23:54:46,673 | INFO     | overall cleanup function is called
[2024-06-22 01:55:08] 2024-06-21 23:54:47,680 | INFO     | --- collectZombieJob: --- 10, [808280]
[2024-06-22 01:55:08] 2024-06-21 23:54:47,680 | INFO     | zombie collector waiting for pid 808280
[2024-06-22 01:55:08] 2024-06-21 23:54:47,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 01:55:08] 2024-06-21 23:54:48,685 | INFO     | collected zombie processes
[2024-06-22 01:55:08] 2024-06-21 23:54:48,685 | INFO     | will now attempt to kill all subprocesses of pid=808280
[2024-06-22 01:55:08] 2024-06-21 23:54:48,919 | INFO     | process IDs to be killed: [808280] (in reverse order)
[2024-06-22 01:55:08] 2024-06-21 23:54:49,145 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 01:55:08] 2024-06-21 23:54:49,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 01:55:08] 2024-06-21 23:54:49,164 | INFO     | did not find any defunct processes belonging to 808280
[2024-06-22 01:55:08] 2024-06-21 23:54:49,178 | INFO     | did not find any defunct processes belonging to 808280
[2024-06-22 01:55:08] 2024-06-21 23:54:49,178 | INFO     | ready for new job
[2024-06-22 01:55:08] 2024-06-21 23:54:49,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 01:55:08] 2024-06-21 23:54:49,180 | INFO     | *************************************
[2024-06-22 01:55:08] 2024-06-21 23:54:49,180 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 01:55:08] 2024-06-21 23:54:49,180 | INFO     | *************************************
[2024-06-22 01:55:08] 2024-06-21 23:54:49,180 | INFO     | 
[2024-06-22 01:55:08] 2024-06-21 23:54:49,188 | INFO     | architecture information:
[2024-06-22 01:55:08] 2024-06-21 23:54:49,188 | INFO     | executing command: cat /etc/os-release
[2024-06-22 01:55:08] 2024-06-21 23:54:49,211 | INFO     | cat /etc/os-release:
[2024-06-22 01:55:08] NAME="CentOS Linux"
[2024-06-22 01:55:08] VERSION="7 (Core)"
[2024-06-22 01:55:08] ID="centos"
[2024-06-22 01:55:08] ID_LIKE="rhel fedora"
[2024-06-22 01:55:08] VERSION_ID="7"
[2024-06-22 01:55:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 01:55:08] ANSI_COLOR="0;31"
[2024-06-22 01:55:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 01:55:08] HOME_URL="https://www.centos.org/"
[2024-06-22 01:55:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 01:55:08] 
[2024-06-22 01:55:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 01:55:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 01:55:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 01:55:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 01:55:08] 
[2024-06-22 01:55:08] 2024-06-21 23:54:49,211 | INFO     | *************************************
[2024-06-22 01:55:08] 2024-06-21 23:54:49,713 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-06-22 01:55:08] 2024-06-21 23:54:49,739 | INFO     | sufficient remaining disk space (3152353951744 B)
[2024-06-22 01:55:08] 2024-06-21 23:54:49,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 01:55:08] 2024-06-21 23:54:49,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 01:55:08] 2024-06-21 23:54:49,740 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 01:55:08] 2024-06-21 23:54:49,740 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 01:55:08] 2024-06-21 23:54:49,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 01:55:08] 2024-06-21 23:54:49,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 01:55:08] 2024-06-21 23:54:49,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 01:55:08] 2024-06-21 23:54:49,878 | INFO     | aborting loop
[2024-06-22 01:55:08] 2024-06-21 23:54:50,034 | INFO     | all data control threads have been joined
[2024-06-22 01:55:08] 2024-06-21 23:54:50,142 | INFO     | all job control threads have been joined
[2024-06-22 01:55:08] 2024-06-21 23:54:50,340 | INFO     | all payload control threads have been joined
[2024-06-22 01:55:08] 2024-06-21 23:54:50,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 01:55:08] 2024-06-21 23:54:50,745 | INFO     | [job] retrieve thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:50,788 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:50,883 | INFO     | [job] job monitor thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,039 | INFO     | [data] control thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,147 | INFO     | [job] control thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,346 | INFO     | [payload] control thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,475 | INFO     | [payload] failed_post thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 01:55:08] 2024-06-21 23:54:51,752 | INFO     | [data] copytool_in thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,772 | INFO     | [job] validate thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:51,792 | INFO     | [payload] validate_post thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:52,062 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:52,149 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:52,391 | INFO     | [data] copytool_out thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:52,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 01:55:08] 2024-06-21 23:54:52,652 | INFO     | [job] queue monitor thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:54:56,476 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:55:00,322 | INFO     | job.realtimelogging is not enabled
[2024-06-22 01:55:08] 2024-06-21 23:55:01,327 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 01:55:08] 2024-06-21 23:55:02,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47787273114688)>', '<ExcThread(monitor, started 47787455489792)>']
[2024-06-22 01:55:08] 2024-06-21 23:55:02,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 01:55:08] 2024-06-21 23:55:02,801 | INFO     | [monitor] control thread has ended
[2024-06-22 01:55:08] 2024-06-21 23:55:07,809 | INFO     | all workflow threads have been joined
[2024-06-22 01:55:08] 2024-06-21 23:55:07,809 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 01:55:08] 2024-06-21 23:55:07,809 | INFO     | traces error code: 0
[2024-06-22 01:55:08] 2024-06-21 23:55:07,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 01:55:08] 2024-06-21 23:55:07,925 [wrapper] ==== pilot stdout END ====
[2024-06-22 01:55:08] 2024-06-21 23:55:07,930 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 01:55:08] 2024-06-21 23:55:07,934 [wrapper] pilotpid: 800524
[2024-06-22 01:55:08] 2024-06-21 23:55:07,938 [wrapper] Pilot exit status: 0
[2024-06-22 01:55:08] 2024-06-21 23:55:07,958 [wrapper] pandaids: 6238851098
[2024-06-22 01:55:08] 2024-06-21 23:55:08,083 [wrapper] cleanup supervisor_pilot 1913924 800525
[2024-06-22 01:55:08] 2024-06-21 23:55:08,085 [wrapper] Test setup, not cleaning
[2024-06-22 01:55:08] 2024-06-21 23:55:08,087 [wrapper] ==== wrapper stdout END ====
[2024-06-22 01:55:08] 2024-06-21 23:55:08,091 [wrapper] ==== wrapper stderr END ====
[2024-06-22 01:55:08] 2024-06-21 23:55:08,097 [wrapper] apfmon messages muted
[2024-06-22 01:55:08]  *** Error codes and diagnostics ***
[2024-06-22 01:55:08]     "exeErrorCode": 0,
[2024-06-22 01:55:08]     "exeErrorDiag": "",
[2024-06-22 01:55:08]     "pilotErrorCode": 0,
[2024-06-22 01:55:08]     "pilotErrorDiag": "",
[2024-06-22 01:55:08]  *** Listing of results directory ***
[2024-06-22 01:55:08] total 878564
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:59 pilot3.tar.gz
[2024-06-22 01:55:08] -rwx------ 1 boinc boinc     32308 Jun 20 14:30 runpilot2-wrapper.sh
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:30 queuedata.json
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc       100 Jun 21 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 01:55:08] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 21:51 run_atlas
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc       105 Jun 21 21:51 job.xml
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:51 start_atlas.sh
[2024-06-22 01:55:08] drwxrwx--x 2 boinc boinc      4096 Jun 21 21:51 shared
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc    482476 Jun 21 21:51 input.tar.gz
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc      6642 Jun 21 21:51 init_data.xml
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc 616738254 Jun 21 21:51 EVNT.40024038._000033.pool.root.1
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc         0 Jun 21 21:51 boinc_lockfile
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc      2480 Jun 21 21:51 pandaJob.out
[2024-06-22 01:55:08] -rw------- 1 boinc boinc       424 Jun 21 21:51 setup.sh.local
[2024-06-22 01:55:08] -rw------- 1 boinc boinc   1025648 Jun 21 21:51 agis_schedconf.cvmfs.json
[2024-06-22 01:55:08] -rw------- 1 boinc boinc   1321363 Jun 21 21:51 cric_ddmendpoints.json
[2024-06-22 01:55:08] drwx------ 4 boinc boinc      4096 Jun 21 21:51 pilot3
[2024-06-22 01:55:08] -rw------- 1 boinc boinc 275862757 Jun 22 01:54 HITS.40024040._000314.pool.root.1
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc       531 Jun 22 01:54 boinc_task_state.xml
[2024-06-22 01:55:08] -rw------- 1 boinc boinc      1037 Jun 22 01:54 memory_monitor_summary.json
[2024-06-22 01:55:08] -rw------- 1 boinc boinc         0 Jun 22 01:54 agis_ddmendpoints.agis.ALL.json
[2024-06-22 01:55:08] -rw------- 1 boinc boinc    341808 Jun 22 01:54 log.40024040._000314.job.log.tgz.1
[2024-06-22 01:55:08] -rw------- 1 boinc boinc      7706 Jun 22 01:54 heartbeat.json
[2024-06-22 01:55:08] -rw------- 1 boinc boinc        95 Jun 22 01:54 pilot_heartbeat.json
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc        28 Jun 22 01:54 wrapper_checkpoint.txt
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc      8192 Jun 22 01:54 boinc_mmap_file
[2024-06-22 01:55:08] -rw------- 1 boinc boinc      4417 Jun 22 01:55 pilotlog.txt
[2024-06-22 01:55:08] -rw------- 1 boinc boinc   1414057 Jun 22 01:55 log.40024040._000314.job.log.1
[2024-06-22 01:55:08] -rw------- 1 boinc boinc       357 Jun 22 01:55 output.list
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc       620 Jun 22 01:55 runtime_log
[2024-06-22 01:55:08] -rw------- 1 boinc boinc   1771520 Jun 22 01:55 result.tar.gz
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc     11410 Jun 22 01:55 runtime_log.err
[2024-06-22 01:55:08] -rw------- 1 boinc boinc       656 Jun 22 01:55 MfBLDmz6Ve5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm1GXKDmKKYQWm.diag
[2024-06-22 01:55:08] -rw-r--r-- 1 boinc boinc     21293 Jun 22 01:55 stderr.txt
[2024-06-22 01:55:08] HITS file was successfully produced:
[2024-06-22 01:55:08] -rw------- 1 boinc boinc 275862757 Jun 22 01:54 shared/HITS.pool.root.1
[2024-06-22 01:55:08]  *** Contents of shared directory: ***
[2024-06-22 01:55:08] total 873916
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:51 start_atlas.sh
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc    482476 Jun 21 21:51 input.tar.gz
[2024-06-22 01:55:08] -rw-r--r-- 2 boinc boinc 616738254 Jun 21 21:51 ATLAS.root_0
[2024-06-22 01:55:08] -rw------- 1 boinc boinc 275862757 Jun 22 01:54 HITS.pool.root.1
[2024-06-22 01:55:08] -rw------- 1 boinc boinc   1771520 Jun 22 01:55 result.tar.gz
01:55:10 (795864): run_atlas exited; CPU time 54303.912250
01:55:10 (795864): called boinc_finish(0)

</stderr_txt>
]]>

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