Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:13:54 (1882382): wrapper (7.7.26015): starting
04:13:54 (1882382): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 04:13:54] Arguments: --nthreads 4
[2024-06-21 04:13:54] Threads: 4
[2024-06-21 04:13:54] Checking for CVMFS
[2024-06-21 04:13:54] No cvmfs_config command found, will try listing directly
[2024-06-21 04:13:54] CVMFS is ok
[2024-06-21 04:13:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 04:13:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 04:13:54] Further information can be found at the LHC@home message board.
[2024-06-21 04:13:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 04:13:54] Checking for apptainer binary...
[2024-06-21 04:13:54] which: no apptainer in ((null))
[2024-06-21 04:13:54] apptainer is not installed, using version from CVMFS
[2024-06-21 04:13:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 04:13:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 04:13:56] apptainer works
[2024-06-21 04:13:56] Set ATHENA_PROC_NUMBER=4
[2024-06-21 04:13:56] Set ATHENA_CORE_NUMBER=4
[2024-06-21 04:13:56] Starting ATLAS job with PandaID=6238850947
[2024-06-21 04:13:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:08:47]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:08:47] 2024-06-21 14:08:29,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 16:08:47] 2024-06-21 14:08:29,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 16:08:47] 2024-06-21 14:08:29,413 | INFO     | fitting pss+swap vs Time
[2024-06-21 16:08:47] 2024-06-21 14:08:29,414 | INFO     | model: linear, x: [1718936137.0, 1718936198.0, 1718936259.0, 1718936320.0, 1718936381.0, 1718936442.0, 1718936503.0, 1718936564.0, 1718936625.0, 1718936686.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,414 | INFO     | sum of square deviations: 106814839950.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,426 | INFO     | sum of deviations: 157705643010.00006
[2024-06-21 16:08:47] 2024-06-21 14:08:29,427 | INFO     | mean x: 1718957487.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,427 | INFO     | mean y: 2382415.122681883
[2024-06-21 16:08:47] 2024-06-21 14:08:29,427 | INFO     | -- intersect: -2535554222.9051957
[2024-06-21 16:08:47] 2024-06-21 14:08:29,427 | INFO     | intersect: -2535554222.9051957
[2024-06-21 16:08:47] 2024-06-21 14:08:29,428 | INFO     | chi2: 3.7262829030547286
[2024-06-21 16:08:47] 2024-06-21 14:08:29,429 | INFO     | model: linear, x: [1718936137.0, 1718936198.0, 1718936259.0, 1718936320.0, 1718936381.0, 1718936442.0, 1718936503.0, 1718936564.0, 1718936625.0, 1718936686.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,429 | INFO     | sum of square deviations: 104545476470.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,441 | INFO     | sum of deviations: 156022875660.0001
[2024-06-21 16:08:47] 2024-06-21 14:08:29,442 | INFO     | mean x: 1718957334.5
[2024-06-21 16:08:47] 2024-06-21 14:08:29,442 | INFO     | mean y: 2382302.0344827585
[2024-06-21 16:08:47] 2024-06-21 14:08:29,442 | INFO     | -- intersect: -2562976578.342321
[2024-06-21 16:08:47] 2024-06-21 14:08:29,442 | INFO     | intersect: -2562976578.342321
[2024-06-21 16:08:47] 2024-06-21 14:08:29,443 | INFO     | chi2: 3.726742159964236
[2024-06-21 16:08:47] 2024-06-21 14:08:29,443 | INFO     | current chi2=3.726742159964236 (change=-0.012324799846268289 %)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,443 | INFO     | right removable region: 695
[2024-06-21 16:08:47] 2024-06-21 14:08:29,444 | INFO     | model: linear, x: [1718936442.0, 1718936503.0, 1718936564.0, 1718936625.0, 1718936686.0, 1718936747.0, 1718936808.0, 1718936869.0, 1718936930.0, 1718936991.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,444 | INFO     | sum of square deviations: 104545476470.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,456 | INFO     | sum of deviations: -612885879.499988
[2024-06-21 16:08:47] 2024-06-21 14:08:29,457 | INFO     | mean x: 1718957639.5
[2024-06-21 16:08:47] 2024-06-21 14:08:29,457 | INFO     | mean y: 2393042.521551724
[2024-06-21 16:08:47] 2024-06-21 14:08:29,457 | INFO     | -- intersect: 12470234.76631132
[2024-06-21 16:08:47] 2024-06-21 14:08:29,457 | INFO     | intersect: 12470234.76631132
[2024-06-21 16:08:47] 2024-06-21 14:08:29,458 | INFO     | chi2: 1.5235803302115614
[2024-06-21 16:08:47] 2024-06-21 14:08:29,458 | INFO     | current chi2=1.5235803302115614 (change=59.11259639029118 %)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,459 | INFO     | model: linear, x: [1718936747.0, 1718936808.0, 1718936869.0, 1718936930.0, 1718936991.0, 1718937052.0, 1718937113.0, 1718937174.0, 1718937235.0, 1718937296.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,459 | INFO     | sum of square deviations: 102308485690.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,471 | INFO     | sum of deviations: -118379303642.00003
[2024-06-21 16:08:47] 2024-06-21 14:08:29,472 | INFO     | mean x: 1718957792.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,472 | INFO     | mean y: 2401070.7250361796
[2024-06-21 16:08:47] 2024-06-21 14:08:29,472 | INFO     | -- intersect: 1991376130.169589
[2024-06-21 16:08:47] 2024-06-21 14:08:29,472 | INFO     | intersect: 1991376130.169589
[2024-06-21 16:08:47] 2024-06-21 14:08:29,473 | INFO     | chi2: 0.407476876312755
[2024-06-21 16:08:47] 2024-06-21 14:08:29,473 | INFO     | current chi2=0.407476876312755 (change=73.25530736825844 %)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,474 | INFO     | model: linear, x: [1718937052.0, 1718937113.0, 1718937174.0, 1718937235.0, 1718937296.0, 1718937357.0, 1718937418.0, 1718937479.0, 1718937540.0, 1718937601.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,474 | INFO     | sum of square deviations: 100103635047.5
[2024-06-21 16:08:47] 2024-06-21 14:08:29,486 | INFO     | sum of deviations: -127086109423.00003
[2024-06-21 16:08:47] 2024-06-21 14:08:29,486 | INFO     | mean x: 1718957944.5
[2024-06-21 16:08:47] 2024-06-21 14:08:29,486 | INFO     | mean y: 2401668.6472303206
[2024-06-21 16:08:47] 2024-06-21 14:08:29,486 | INFO     | -- intersect: 2184696820.3128333
[2024-06-21 16:08:47] 2024-06-21 14:08:29,486 | INFO     | intersect: 2184696820.3128333
[2024-06-21 16:08:47] 2024-06-21 14:08:29,487 | INFO     | chi2: 0.371246086331356
[2024-06-21 16:08:47] 2024-06-21 14:08:29,488 | INFO     | current chi2=0.371246086331356 (change=8.891495956592738 %)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,488 | INFO     | left removable region: 30
[2024-06-21 16:08:47] 2024-06-21 14:08:29,488 | INFO     | model: linear, x: [1718937967.0, 1718938028.0, 1718938089.0, 1718938150.0, 1718938211.0, 1718938272.0, 1718938333.0, 1718938394.0, 1718938455.0, 1718938516.0, 1718
[2024-06-21 16:08:47] 2024-06-21 14:08:29,489 | INFO     | sum of square deviations: 91188984180.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,500 | INFO     | sum of deviations: -77073470415.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,500 | INFO     | mean x: 1718958219.0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,500 | INFO     | mean y: 2398090.852631579
[2024-06-21 16:08:47] 2024-06-21 14:08:29,500 | INFO     | -- intersect: 1455271775.4108489
[2024-06-21 16:08:47] 2024-06-21 14:08:29,500 | INFO     | intersect: 1455271775.4108489
[2024-06-21 16:08:47] 2024-06-21 14:08:29,501 | INFO     | chi2: 0.3139657657751935
[2024-06-21 16:08:47] 2024-06-21 14:08:29,501 | INFO     | -- intersect: 1455271775.4108489
[2024-06-21 16:08:47] 2024-06-21 14:08:29,501 | INFO     | current memory leak: -0.85 B/s (using 665 data points, chi2=0.31)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,502 | INFO     | ..............................
[2024-06-21 16:08:47] 2024-06-21 14:08:29,502 | INFO     | . Timing measurements:
[2024-06-21 16:08:47] 2024-06-21 14:08:29,502 | INFO     | . get job = 0 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . initial setup = 2 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . payload setup = 17 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . stage-in = 0 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . payload execution = 42769 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . stage-out = 1 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | . log creation = 0 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,503 | INFO     | ..............................
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | 
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | job summary report
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | --------------------------------------------------
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | PanDA job id: 6238850947
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | task id: 38921013
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | errors: (none)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | pilot state: finished 
[2024-06-21 16:08:47] 2024-06-21 14:08:29,891 | INFO     | transexitcode: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | exeerrorcode: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | exeerrordiag: 
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | exitcode: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | exitmsg: OK
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | cpuconsumptiontime: 166531 s
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | nevents: 400
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | neventsw: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | pid: 1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | pgrp: 1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | corecount: 4
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | event service: False
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | sizes: {0: 2386879, 1: 2387078, 12: 2387078, 17: 2387312, 22: 2387340, 42791: 2431146, 42793: 2440128, 42795: 2440184, 42800: 2440354}
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | --------------------------------------------------
[2024-06-21 16:08:47] 2024-06-21 14:08:29,892 | INFO     | 
[2024-06-21 16:08:47] 2024-06-21 14:08:29,893 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-06-21 16:08:47] 2024-06-21 14:08:29,920 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:08:47] 2024-06-21 14:08:29,922 | INFO     | job 6238850947 has completed (purged errors)
[2024-06-21 16:08:47] 2024-06-21 14:08:29,923 | INFO     | overall cleanup function is called
[2024-06-21 16:08:47] 2024-06-21 14:08:30,931 | INFO     | --- collectZombieJob: --- 10, [1894684]
[2024-06-21 16:08:47] 2024-06-21 14:08:30,931 | INFO     | zombie collector waiting for pid 1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:30,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:08:47] 2024-06-21 14:08:31,932 | INFO     | collected zombie processes
[2024-06-21 16:08:47] 2024-06-21 14:08:31,933 | INFO     | will now attempt to kill all subprocesses of pid=1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:32,082 | INFO     | process IDs to be killed: [1894684] (in reverse order)
[2024-06-21 16:08:47] 2024-06-21 14:08:32,182 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:08:47] 2024-06-21 14:08:32,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:08:47] 2024-06-21 14:08:32,192 | INFO     | did not find any defunct processes belonging to 1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:32,198 | INFO     | did not find any defunct processes belonging to 1894684
[2024-06-21 16:08:47] 2024-06-21 14:08:32,199 | INFO     | ready for new job
[2024-06-21 16:08:47] 2024-06-21 14:08:32,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:08:47] 2024-06-21 14:08:32,201 | INFO     | *************************************
[2024-06-21 16:08:47] 2024-06-21 14:08:32,202 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:08:47] 2024-06-21 14:08:32,202 | INFO     | *************************************
[2024-06-21 16:08:47] 2024-06-21 14:08:32,202 | INFO     | 
[2024-06-21 16:08:47] 2024-06-21 14:08:32,205 | INFO     | architecture information:
[2024-06-21 16:08:47] 2024-06-21 14:08:32,205 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:08:47] 2024-06-21 14:08:32,219 | INFO     | cat /etc/os-release:
[2024-06-21 16:08:47] NAME="CentOS Linux"
[2024-06-21 16:08:47] VERSION="7 (Core)"
[2024-06-21 16:08:47] ID="centos"
[2024-06-21 16:08:47] ID_LIKE="rhel fedora"
[2024-06-21 16:08:47] VERSION_ID="7"
[2024-06-21 16:08:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:08:47] ANSI_COLOR="0;31"
[2024-06-21 16:08:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:08:47] HOME_URL="https://www.centos.org/"
[2024-06-21 16:08:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:08:47] 
[2024-06-21 16:08:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:08:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:08:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:08:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:08:47] 
[2024-06-21 16:08:47] 2024-06-21 14:08:32,219 | INFO     | *************************************
[2024-06-21 16:08:47] 2024-06-21 14:08:32,722 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-06-21 16:08:47] 2024-06-21 14:08:32,740 | INFO     | sufficient remaining disk space (666191790080 B)
[2024-06-21 16:08:47] 2024-06-21 14:08:32,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:08:47] 2024-06-21 14:08:32,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:08:47] 2024-06-21 14:08:32,741 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 16:08:47] 2024-06-21 14:08:32,742 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:08:47] 2024-06-21 14:08:32,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:08:47] 2024-06-21 14:08:32,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:08:47] 2024-06-21 14:08:32,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:08:47] 2024-06-21 14:08:32,773 | INFO     | aborting loop
[2024-06-21 16:08:47] 2024-06-21 14:08:33,152 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:08:47] 2024-06-21 14:08:33,700 | INFO     | all data control threads have been joined
[2024-06-21 16:08:47] 2024-06-21 14:08:33,747 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:33,774 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:33,897 | INFO     | all payload control threads have been joined
[2024-06-21 16:08:47] 2024-06-21 14:08:34,001 | INFO     | all job control threads have been joined
[2024-06-21 16:08:47] 2024-06-21 14:08:34,014 | INFO     | [job] validate thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,327 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:08:47] 2024-06-21 14:08:34,705 | INFO     | [data] control thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,887 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,894 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,902 | INFO     | [payload] control thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:34,909 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,005 | INFO     | [job] control thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,151 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,157 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,174 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,233 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,615 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:35,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:08:47] 2024-06-21 14:08:39,773 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:08:47] 2024-06-21 14:08:41,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47053981701184)>', '<ExcThread(monitor, started 47054168278784)>']
[2024-06-21 16:08:47] 2024-06-21 14:08:41,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:08:47] 2024-06-21 14:08:41,782 | INFO     | [monitor] control thread has ended
[2024-06-21 16:08:47] 2024-06-21 14:08:46,772 | INFO     | all workflow threads have been joined
[2024-06-21 16:08:47] 2024-06-21 14:08:46,772 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:08:47] 2024-06-21 14:08:46,772 | INFO     | traces error code: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:46,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:08:47] 2024-06-21 14:08:46,898 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:08:47] 2024-06-21 14:08:46,901 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:08:47] 2024-06-21 14:08:46,903 [wrapper] pilotpid: 1886981
[2024-06-21 16:08:47] 2024-06-21 14:08:46,906 [wrapper] Pilot exit status: 0
[2024-06-21 16:08:47] 2024-06-21 14:08:46,933 [wrapper] pandaids: 6238850947
[2024-06-21 16:08:47] 2024-06-21 14:08:46,993 [wrapper] cleanup supervisor_pilot 3429868 1886982
[2024-06-21 16:08:47] 2024-06-21 14:08:47,013 [wrapper] Test setup, not cleaning
[2024-06-21 16:08:47] 2024-06-21 14:08:47,015 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:08:47] 2024-06-21 14:08:47,017 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:08:47] 2024-06-21 14:08:47,021 [wrapper] apfmon messages muted
[2024-06-21 16:08:47]  *** Error codes and diagnostics ***
[2024-06-21 16:08:47]     "exeErrorCode": 0,
[2024-06-21 16:08:47]     "exeErrorDiag": "",
[2024-06-21 16:08:47]     "pilotErrorCode": 0,
[2024-06-21 16:08:47]     "pilotErrorDiag": "",
[2024-06-21 16:08:47]  *** Listing of results directory ***
[2024-06-21 16:08:47] total 882372
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:59 pilot3.tar.gz
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:15 queuedata.json
[2024-06-21 16:08:47] -rwx------ 1 boinc boinc     32308 Jun 20 14:16 runpilot2-wrapper.sh
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc       100 Jun 21 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:08:47] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 04:13 run_atlas
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc       105 Jun 21 04:13 job.xml
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc      6661 Jun 21 04:13 init_data.xml
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc 540142408 Jun 21 04:13 EVNT.38776210._000504.pool.root.1
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:13 start_atlas.sh
[2024-06-21 16:08:47] drwxrwx--x 2 boinc boinc      4096 Jun 21 04:13 shared
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc    482535 Jun 21 04:13 input.tar.gz
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc         0 Jun 21 04:13 boinc_lockfile
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc      2645 Jun 21 04:13 pandaJob.out
[2024-06-21 16:08:47] -rw------- 1 boinc boinc       424 Jun 21 04:13 setup.sh.local
[2024-06-21 16:08:47] -rw------- 1 boinc boinc   1024126 Jun 21 04:14 agis_schedconf.cvmfs.json
[2024-06-21 16:08:47] -rw------- 1 boinc boinc   1321251 Jun 21 04:14 cric_ddmendpoints.json
[2024-06-21 16:08:47] drwx------ 4 boinc boinc      4096 Jun 21 04:14 pilot3
[2024-06-21 16:08:47] -rw------- 1 boinc boinc 348533978 Jun 21 16:07 HITS.38921013._050192.pool.root.1
[2024-06-21 16:08:47] -rw------- 1 boinc boinc        95 Jun 21 16:07 pilot_heartbeat.json
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc       533 Jun 21 16:07 boinc_task_state.xml
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:08 boinc_mmap_file
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc        29 Jun 21 16:08 wrapper_checkpoint.txt
[2024-06-21 16:08:47] -rw------- 1 boinc boinc      1046 Jun 21 16:08 memory_monitor_summary.json
[2024-06-21 16:08:47] -rw------- 1 boinc boinc         0 Jun 21 16:08 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:08:47] -rw------- 1 boinc boinc    669792 Jun 21 16:08 log.38921013._050192.job.log.tgz.1
[2024-06-21 16:08:47] -rw------- 1 boinc boinc      7766 Jun 21 16:08 heartbeat.json
[2024-06-21 16:08:47] -rw------- 1 boinc boinc      4344 Jun 21 16:08 pilotlog.txt
[2024-06-21 16:08:47] -rw------- 1 boinc boinc   4998518 Jun 21 16:08 log.38921013._050192.job.log.1
[2024-06-21 16:08:47] -rw------- 1 boinc boinc       357 Jun 21 16:08 output.list
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:08 runtime_log
[2024-06-21 16:08:47] -rw------- 1 boinc boinc   5683200 Jun 21 16:08 result.tar.gz
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:08 runtime_log.err
[2024-06-21 16:08:47] -rw------- 1 boinc boinc       662 Jun 21 16:08 BAqNDm3sVe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmiGXKDmUyxedm.diag
[2024-06-21 16:08:47] -rw-r--r-- 1 boinc boinc     21363 Jun 21 16:08 stderr.txt
[2024-06-21 16:08:47] HITS file was successfully produced:
[2024-06-21 16:08:47] -rw------- 1 boinc boinc 348533978 Jun 21 16:07 shared/HITS.pool.root.1
[2024-06-21 16:08:47]  *** Contents of shared directory: ***
[2024-06-21 16:08:47] total 873904
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc 540142408 Jun 21 04:13 ATLAS.root_0
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:13 start_atlas.sh
[2024-06-21 16:08:47] -rw-r--r-- 2 boinc boinc    482535 Jun 21 04:13 input.tar.gz
[2024-06-21 16:08:47] -rw------- 1 boinc boinc 348533978 Jun 21 16:07 HITS.pool.root.1
[2024-06-21 16:08:47] -rw------- 1 boinc boinc   5683200 Jun 21 16:08 result.tar.gz
16:08:49 (1882382): run_atlas exited; CPU time 165895.222419
16:08:49 (1882382): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN