Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:03:08 (3787762): wrapper (7.7.26015): starting
18:03:08 (3787762): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 18:03:08] Arguments: --nthreads 4
[2024-06-21 18:03:08] Threads: 4
[2024-06-21 18:03:08] Checking for CVMFS
[2024-06-21 18:03:08] No cvmfs_config command found, will try listing directly
[2024-06-21 18:03:08] CVMFS is ok
[2024-06-21 18:03:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 18:03:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 18:03:08] Further information can be found at the LHC@home message board.
[2024-06-21 18:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 18:03:08] Checking for apptainer binary...
[2024-06-21 18:03:08] which: no apptainer in ((null))
[2024-06-21 18:03:08] apptainer is not installed, using version from CVMFS
[2024-06-21 18:03:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 18:03:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-06-21 18:03:09] apptainer works
[2024-06-21 18:03:09] Set ATHENA_PROC_NUMBER=4
[2024-06-21 18:03:09] Set ATHENA_CORE_NUMBER=4
[2024-06-21 18:03:09] Starting ATLAS job with PandaID=6238847455
[2024-06-21 18:03:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 22:52:49]  *** The last 200 lines of the pilot log: ***
[2024-06-21 22:52:49] 2024-06-21 20:52:35,343 | INFO     | model: linear, x: [1718985846.0, 1718985907.0, 1718985968.0, 1718986029.0, 1718986090.0, 1718986151.0, 1718986212.0, 1718986273.0, 1718986334.0, 1718986395.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,343 | INFO     | sum of square deviations: 6734191380.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,345 | INFO     | sum of deviations: 62591154012.00001
[2024-06-21 22:52:49] 2024-06-21 20:52:35,345 | INFO     | mean x: 1718994325.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,345 | INFO     | mean y: 2358538.007168459
[2024-06-21 22:52:49] 2024-06-21 20:52:35,346 | INFO     | -- intersect: -15974888390.462067
[2024-06-21 22:52:49] 2024-06-21 20:52:35,346 | INFO     | intersect: -15974888390.462067
[2024-06-21 22:52:49] 2024-06-21 20:52:35,346 | INFO     | chi2: 4.103450189524375
[2024-06-21 22:52:49] 2024-06-21 20:52:35,346 | INFO     | current chi2=4.103450189524375 (change=-0.07687617099872389 %)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,346 | INFO     | right removable region: 278
[2024-06-21 22:52:49] 2024-06-21 20:52:35,347 | INFO     | model: linear, x: [1718986151.0, 1718986212.0, 1718986273.0, 1718986334.0, 1718986395.0, 1718986456.0, 1718986517.0, 1718986578.0, 1718986639.0, 1718986700.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,347 | INFO     | sum of square deviations: 6734191380.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,350 | INFO     | sum of deviations: -1229246624.0000138
[2024-06-21 22:52:49] 2024-06-21 20:52:35,350 | INFO     | mean x: 1718994630.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,350 | INFO     | mean y: 2385878.8960573478
[2024-06-21 22:52:49] 2024-06-21 20:52:35,350 | INFO     | -- intersect: 316167924.3361816
[2024-06-21 22:52:49] 2024-06-21 20:52:35,350 | INFO     | intersect: 316167924.3361816
[2024-06-21 22:52:49] 2024-06-21 20:52:35,351 | INFO     | chi2: 1.6875302685996316
[2024-06-21 22:52:49] 2024-06-21 20:52:35,351 | INFO     | current chi2=1.6875302685996316 (change=58.843716890582634 %)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,351 | INFO     | model: linear, x: [1718986456.0, 1718986517.0, 1718986578.0, 1718986639.0, 1718986700.0, 1718986761.0, 1718986822.0, 1718986883.0, 1718986944.0, 1718987005.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,351 | INFO     | sum of square deviations: 6378584712.5
[2024-06-21 22:52:49] 2024-06-21 20:52:35,354 | INFO     | sum of deviations: -49063728803.00002
[2024-06-21 22:52:49] 2024-06-21 20:52:35,354 | INFO     | mean x: 1718994782.5
[2024-06-21 22:52:49] 2024-06-21 20:52:35,354 | INFO     | mean y: 2406392.5109489053
[2024-06-21 22:52:49] 2024-06-21 20:52:35,354 | INFO     | -- intersect: 13224821336.232214
[2024-06-21 22:52:49] 2024-06-21 20:52:35,354 | INFO     | intersect: 13224821336.232214
[2024-06-21 22:52:49] 2024-06-21 20:52:35,355 | INFO     | chi2: 0.4645827898953524
[2024-06-21 22:52:49] 2024-06-21 20:52:35,355 | INFO     | current chi2=0.4645827898953524 (change=72.46966181644383 %)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,355 | INFO     | model: linear, x: [1718986761.0, 1718986822.0, 1718986883.0, 1718986944.0, 1718987005.0, 1718987066.0, 1718987127.0, 1718987188.0, 1718987249.0, 1718987310.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,355 | INFO     | sum of square deviations: 6035722470.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,357 | INFO     | sum of deviations: -58973123354.000015
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | mean x: 1718994935.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | mean y: 2410727.903345725
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | -- intersect: 16798163158.623745
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | intersect: 16798163158.623745
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | chi2: 0.23707632068941145
[2024-06-21 22:52:49] 2024-06-21 20:52:35,358 | INFO     | current chi2=0.23707632068941145 (change=48.97005962213687 %)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,359 | INFO     | model: linear, x: [1718987066.0, 1718987127.0, 1718987188.0, 1718987249.0, 1718987310.0, 1718987371.0, 1718987432.0, 1718987493.0, 1718987554.0, 1718987615.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,359 | INFO     | sum of square deviations: 5705372090.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,361 | INFO     | sum of deviations: -51922771292.0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,361 | INFO     | mean x: 1718995087.5
[2024-06-21 22:52:49] 2024-06-21 20:52:35,361 | INFO     | mean y: 2407471.878787879
[2024-06-21 22:52:49] 2024-06-21 20:52:35,361 | INFO     | -- intersect: 15646433378.05488
[2024-06-21 22:52:49] 2024-06-21 20:52:35,362 | INFO     | intersect: 15646433378.05488
[2024-06-21 22:52:49] 2024-06-21 20:52:35,362 | INFO     | chi2: 0.22993214853887856
[2024-06-21 22:52:49] 2024-06-21 20:52:35,362 | INFO     | current chi2=0.22993214853887856 (change=3.0134482135364 %)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,362 | INFO     | left removable region: 40
[2024-06-21 22:52:49] 2024-06-21 20:52:35,362 | INFO     | model: linear, x: [1718988286.0, 1718988347.0, 1718988408.0, 1718988469.0, 1718988530.0, 1718988591.0, 1718988652.0, 1718988713.0, 1718988774.0, 1718988835.0, 1718
[2024-06-21 22:52:49] 2024-06-21 20:52:35,363 | INFO     | sum of square deviations: 4180243959.5
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | sum of deviations: -18131087431.499996
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | mean x: 1718995514.5
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | mean y: 2390398.214285714
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | -- intersect: 7458237059.250725
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | intersect: 7458237059.250725
[2024-06-21 22:52:49] 2024-06-21 20:52:35,365 | INFO     | chi2: 0.14132875015372495
[2024-06-21 22:52:49] 2024-06-21 20:52:35,366 | INFO     | -- intersect: 7458237059.250725
[2024-06-21 22:52:49] 2024-06-21 20:52:35,366 | INFO     | current memory leak: -4.34 B/s (using 238 data points, chi2=0.14)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,366 | INFO     | ..............................
[2024-06-21 22:52:49] 2024-06-21 20:52:35,366 | INFO     | . Timing measurements:
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . get job = 0 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . initial setup = 1 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . payload setup = 11 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . stage-in = 0 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . payload execution = 17304 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . stage-out = 1 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | . log creation = 0 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,367 | INFO     | ..............................
[2024-06-21 22:52:49] 2024-06-21 20:52:35,523 | WARNING  | process 3801886 is no longer using CPU - aborting
[2024-06-21 22:52:49] 2024-06-21 20:52:35,523 | INFO     | aborting job monitoring since job object (job id=6238847455) has expired
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | 
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | job summary report
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | --------------------------------------------------
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | PanDA job id: 6238847455
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | task id: 40024031
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | errors: (none)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | pilot state: finished 
[2024-06-21 22:52:49] 2024-06-21 20:52:35,690 | INFO     | transexitcode: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | exeerrorcode: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | exeerrordiag: 
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | exitcode: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | exitmsg: OK
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | cpuconsumptiontime: 65927 s
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | nevents: 400
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | neventsw: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | pid: 3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | pgrp: 3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | corecount: 4
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | event service: False
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | sizes: {0: 2386735, 1: 2386934, 7: 2387140, 11: 2387168, 17320: 2418947, 17321: 2428113, 17328: 2428227}
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | --------------------------------------------------
[2024-06-21 22:52:49] 2024-06-21 20:52:35,691 | INFO     | 
[2024-06-21 22:52:49] 2024-06-21 20:52:35,692 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,723 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 22:52:49] 2024-06-21 20:52:35,723 | INFO     | job 6238847455 has completed (purged errors)
[2024-06-21 22:52:49] 2024-06-21 20:52:35,723 | INFO     | overall cleanup function is called
[2024-06-21 22:52:49] 2024-06-21 20:52:36,726 | INFO     | --- collectZombieJob: --- 10, [3801886]
[2024-06-21 22:52:49] 2024-06-21 20:52:36,726 | INFO     | zombie collector waiting for pid 3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:36,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 22:52:49] 2024-06-21 20:52:37,731 | INFO     | collected zombie processes
[2024-06-21 22:52:49] 2024-06-21 20:52:37,731 | INFO     | will now attempt to kill all subprocesses of pid=3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:37,883 | INFO     | process IDs to be killed: [3801886] (in reverse order)
[2024-06-21 22:52:49] 2024-06-21 20:52:38,015 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 22:52:49] 2024-06-21 20:52:38,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 22:52:49] 2024-06-21 20:52:38,025 | INFO     | did not find any defunct processes belonging to 3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:38,035 | INFO     | did not find any defunct processes belonging to 3801886
[2024-06-21 22:52:49] 2024-06-21 20:52:38,035 | INFO     | ready for new job
[2024-06-21 22:52:49] 2024-06-21 20:52:38,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 22:52:49] 2024-06-21 20:52:38,038 | INFO     | *************************************
[2024-06-21 22:52:49] 2024-06-21 20:52:38,038 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 22:52:49] 2024-06-21 20:52:38,038 | INFO     | *************************************
[2024-06-21 22:52:49] 2024-06-21 20:52:38,038 | INFO     | 
[2024-06-21 22:52:49] 2024-06-21 20:52:38,042 | INFO     | architecture information:
[2024-06-21 22:52:49] 2024-06-21 20:52:38,042 | INFO     | executing command: cat /etc/os-release
[2024-06-21 22:52:49] 2024-06-21 20:52:38,057 | INFO     | cat /etc/os-release:
[2024-06-21 22:52:49] NAME="CentOS Linux"
[2024-06-21 22:52:49] VERSION="7 (Core)"
[2024-06-21 22:52:49] ID="centos"
[2024-06-21 22:52:49] ID_LIKE="rhel fedora"
[2024-06-21 22:52:49] VERSION_ID="7"
[2024-06-21 22:52:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 22:52:49] ANSI_COLOR="0;31"
[2024-06-21 22:52:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 22:52:49] HOME_URL="https://www.centos.org/"
[2024-06-21 22:52:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 22:52:49] 
[2024-06-21 22:52:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 22:52:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 22:52:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 22:52:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 22:52:49] 
[2024-06-21 22:52:49] 2024-06-21 20:52:38,057 | INFO     | *************************************
[2024-06-21 22:52:49] 2024-06-21 20:52:38,560 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-06-21 22:52:49] 2024-06-21 20:52:38,581 | INFO     | sufficient remaining disk space (664431230976 B)
[2024-06-21 22:52:49] 2024-06-21 20:52:38,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 22:52:49] 2024-06-21 20:52:38,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 22:52:49] 2024-06-21 20:52:38,582 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 22:52:49] 2024-06-21 20:52:38,582 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 22:52:49] 2024-06-21 20:52:38,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 22:52:49] 2024-06-21 20:52:38,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 22:52:49] 2024-06-21 20:52:38,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 22:52:49] 2024-06-21 20:52:38,701 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 22:52:49] 2024-06-21 20:52:38,980 | INFO     | all payload control threads have been joined
[2024-06-21 22:52:49] 2024-06-21 20:52:38,992 | INFO     | all data control threads have been joined
[2024-06-21 22:52:49] 2024-06-21 20:52:39,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:52:49] 2024-06-21 20:52:39,031 | INFO     | aborting loop
[2024-06-21 22:52:49] 2024-06-21 20:52:39,263 | INFO     | all job control threads have been joined
[2024-06-21 22:52:49] 2024-06-21 20:52:39,587 | INFO     | [job] retrieve thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:39,626 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:39,985 | INFO     | [payload] control thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:39,997 | INFO     | [data] control thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,020 | INFO     | [job] validate thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,035 | INFO     | [job] job monitor thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,268 | INFO     | [job] control thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,309 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,359 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,424 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:52:49] 2024-06-21 20:52:40,502 | INFO     | [data] copytool_in thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,540 | INFO     | [payload] validate_post thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:40,611 | INFO     | [data] copytool_out thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:41,030 | INFO     | [payload] failed_post thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:41,485 | INFO     | [job] queue monitor thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:42,707 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 22:52:49] 2024-06-21 20:52:42,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47931211617344)>', '<ExcThread(monitor, started 47931391891200)>']
[2024-06-21 22:52:49] 2024-06-21 20:52:43,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 22:52:49] 2024-06-21 20:52:43,606 | INFO     | [monitor] control thread has ended
[2024-06-21 22:52:49] 2024-06-21 20:52:47,957 | INFO     | all workflow threads have been joined
[2024-06-21 22:52:49] 2024-06-21 20:52:47,957 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 22:52:49] 2024-06-21 20:52:47,957 | INFO     | traces error code: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:47,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 22:52:49] 2024-06-21 20:52:48,066 [wrapper] ==== pilot stdout END ====
[2024-06-21 22:52:49] 2024-06-21 20:52:48,069 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 22:52:49] 2024-06-21 20:52:48,072 [wrapper] pilotpid: 3794685
[2024-06-21 22:52:49] 2024-06-21 20:52:48,074 [wrapper] Pilot exit status: 0
[2024-06-21 22:52:49] 2024-06-21 20:52:48,092 [wrapper] pandaids: 6238847455
[2024-06-21 22:52:49] 2024-06-21 20:52:48,157 [wrapper] cleanup supervisor_pilot  222688 3794686
[2024-06-21 22:52:49] 2024-06-21 20:52:48,160 [wrapper] Test setup, not cleaning
[2024-06-21 22:52:49] 2024-06-21 20:52:48,163 [wrapper] ==== wrapper stdout END ====
[2024-06-21 22:52:49] 2024-06-21 20:52:48,166 [wrapper] ==== wrapper stderr END ====
[2024-06-21 22:52:49] 2024-06-21 20:52:48,171 [wrapper] apfmon messages muted
[2024-06-21 22:52:49]  *** Error codes and diagnostics ***
[2024-06-21 22:52:49]     "exeErrorCode": 0,
[2024-06-21 22:52:49]     "exeErrorDiag": "",
[2024-06-21 22:52:49]     "pilotErrorCode": 0,
[2024-06-21 22:52:49]     "pilotErrorDiag": "",
[2024-06-21 22:52:49]  *** Listing of results directory ***
[2024-06-21 22:52:49] total 846400
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:59 pilot3.tar.gz
[2024-06-21 22:52:49] -rwx------ 1 boinc boinc     32308 Jun 20 14:04 runpilot2-wrapper.sh
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc      5654 Jun 20 14:04 queuedata.json
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc       100 Jun 21 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 22:52:49] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 18:03 run_atlas
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc       105 Jun 21 18:03 job.xml
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc 599128912 Jun 21 18:03 EVNT.40024029._000008.pool.root.1
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:03 start_atlas.sh
[2024-06-21 22:52:49] drwxrwx--x 2 boinc boinc      4096 Jun 21 18:03 shared
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc    482503 Jun 21 18:03 input.tar.gz
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc      6661 Jun 21 18:03 init_data.xml
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc         0 Jun 21 18:03 boinc_lockfile
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc      2569 Jun 21 18:03 pandaJob.out
[2024-06-21 22:52:49] -rw------- 1 boinc boinc       424 Jun 21 18:03 setup.sh.local
[2024-06-21 22:52:49] -rw------- 1 boinc boinc   1023047 Jun 21 18:03 agis_schedconf.cvmfs.json
[2024-06-21 22:52:49] -rw------- 1 boinc boinc   1321307 Jun 21 18:03 cric_ddmendpoints.json
[2024-06-21 22:52:49] drwx------ 4 boinc boinc      4096 Jun 21 18:03 pilot3
[2024-06-21 22:52:49] -rw------- 1 boinc boinc 259730872 Jun 21 22:51 HITS.40024031._000174.pool.root.1
[2024-06-21 22:52:49] -rw------- 1 boinc boinc      1047 Jun 21 22:52 memory_monitor_summary.json
[2024-06-21 22:52:49] -rw------- 1 boinc boinc        95 Jun 21 22:52 pilot_heartbeat.json
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc      8192 Jun 21 22:52 boinc_mmap_file
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc        28 Jun 21 22:52 wrapper_checkpoint.txt
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc       532 Jun 21 22:52 boinc_task_state.xml
[2024-06-21 22:52:49] -rw------- 1 boinc boinc         0 Jun 21 22:52 agis_ddmendpoints.agis.ALL.json
[2024-06-21 22:52:49] -rw------- 1 boinc boinc    386064 Jun 21 22:52 log.40024031._000174.job.log.tgz.1
[2024-06-21 22:52:49] -rw------- 1 boinc boinc      7758 Jun 21 22:52 heartbeat.json
[2024-06-21 22:52:49] -rw------- 1 boinc boinc      4344 Jun 21 22:52 pilotlog.txt
[2024-06-21 22:52:49] -rw------- 1 boinc boinc   1773533 Jun 21 22:52 log.40024031._000174.job.log.1
[2024-06-21 22:52:49] -rw------- 1 boinc boinc       357 Jun 21 22:52 output.list
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc       620 Jun 21 22:52 runtime_log
[2024-06-21 22:52:49] -rw------- 1 boinc boinc   2181120 Jun 21 22:52 result.tar.gz
[2024-06-21 22:52:49] -rw------- 1 boinc boinc       659 Jun 21 22:52 wgxKDmAiVe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm48kKDmH26bXn.diag
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc     11410 Jun 21 22:52 runtime_log.err
[2024-06-21 22:52:49] -rw-r--r-- 1 boinc boinc     21401 Jun 21 22:52 stderr.txt
[2024-06-21 22:52:49] HITS file was successfully produced:
[2024-06-21 22:52:49] -rw------- 1 boinc boinc 259730872 Jun 21 22:51 shared/HITS.pool.root.1
[2024-06-21 22:52:49]  *** Contents of shared directory: ***
[2024-06-21 22:52:49] total 841364
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc 599128912 Jun 21 18:03 ATLAS.root_0
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc     17537 Jun 21 18:03 start_atlas.sh
[2024-06-21 22:52:49] -rw-r--r-- 2 boinc boinc    482503 Jun 21 18:03 input.tar.gz
[2024-06-21 22:52:49] -rw------- 1 boinc boinc 259730872 Jun 21 22:51 HITS.pool.root.1
[2024-06-21 22:52:49] -rw------- 1 boinc boinc   2181120 Jun 21 22:52 result.tar.gz
22:52:50 (3787762): run_atlas exited; CPU time 65617.367535
22:52:50 (3787762): called boinc_finish(0)

</stderr_txt>
]]>

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