Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:59 (2054510): wrapper (7.7.26015): starting
05:43:59 (2054510): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:43:59] Arguments: --nthreads 4
[2024-06-21 05:43:59] Threads: 4
[2024-06-21 05:43:59] Checking for CVMFS
[2024-06-21 05:43:59] No cvmfs_config command found, will try listing directly
[2024-06-21 05:43:59] CVMFS is ok
[2024-06-21 05:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:43:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:43:59] Further information can be found at the LHC@home message board.
[2024-06-21 05:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:43:59] Checking for apptainer binary...
[2024-06-21 05:43:59] which: no apptainer in ((null))
[2024-06-21 05:43:59] apptainer is not installed, using version from CVMFS
[2024-06-21 05:43:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:44:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-06-21 05:44:01] apptainer works
[2024-06-21 05:44:01] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:44:01] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:44:01] Starting ATLAS job with PandaID=6238847424
[2024-06-21 05:44:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 10:28:08]  *** The last 200 lines of the pilot log: ***
[2024-06-21 10:28:08] 2024-06-21 08:27:47,748 | INFO     | model: linear, x: [1718941496.0, 1718941557.0, 1718941618.0, 1718941679.0, 1718941740.0, 1718941801.0, 1718941862.0, 1718941923.0, 1718941984.0, 1718942045.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,748 | INFO     | sum of square deviations: 6309000152.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,750 | INFO     | sum of deviations: 114484350796.00002
[2024-06-21 10:28:08] 2024-06-21 08:27:47,751 | INFO     | mean x: 1718949792.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,751 | INFO     | mean y: 2316980.4285714286
[2024-06-21 10:28:08] 2024-06-21 08:27:47,751 | INFO     | -- intersect: -31190082171.06843
[2024-06-21 10:28:08] 2024-06-21 08:27:47,751 | INFO     | intersect: -31190082171.06843
[2024-06-21 10:28:08] 2024-06-21 08:27:47,751 | INFO     | chi2: 3.58008023198698
[2024-06-21 10:28:08] 2024-06-21 08:27:47,752 | INFO     | current chi2=3.58008023198698 (change=-0.017195510140697073 %)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,752 | INFO     | right removable region: 272
[2024-06-21 10:28:08] 2024-06-21 08:27:47,752 | INFO     | model: linear, x: [1718941801.0, 1718941862.0, 1718941923.0, 1718941984.0, 1718942045.0, 1718942106.0, 1718942167.0, 1718942228.0, 1718942289.0, 1718942350.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,752 | INFO     | sum of square deviations: 6309000152.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,754 | INFO     | sum of deviations: 56594793439.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,754 | INFO     | mean x: 1718950097.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,754 | INFO     | mean y: 2343966.4285714286
[2024-06-21 10:28:08] 2024-06-21 08:27:47,755 | INFO     | -- intersect: -15417472696.727535
[2024-06-21 10:28:08] 2024-06-21 08:27:47,755 | INFO     | intersect: -15417472696.727535
[2024-06-21 10:28:08] 2024-06-21 08:27:47,755 | INFO     | chi2: 1.4071923715422847
[2024-06-21 10:28:08] 2024-06-21 08:27:47,755 | INFO     | current chi2=1.4071923715422847 (change=60.68707251658177 %)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,755 | INFO     | model: linear, x: [1718942106.0, 1718942167.0, 1718942228.0, 1718942289.0, 1718942350.0, 1718942411.0, 1718942472.0, 1718942533.0, 1718942594.0, 1718942655.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,756 | INFO     | sum of square deviations: 5968658887.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,758 | INFO     | sum of deviations: 6783952770.5
[2024-06-21 10:28:08] 2024-06-21 08:27:47,758 | INFO     | mean x: 1718950249.5
[2024-06-21 10:28:08] 2024-06-21 08:27:47,758 | INFO     | mean y: 2366288.25
[2024-06-21 10:28:08] 2024-06-21 08:27:47,758 | INFO     | -- intersect: -1951385388.3361697
[2024-06-21 10:28:08] 2024-06-21 08:27:47,758 | INFO     | intersect: -1951385388.3361697
[2024-06-21 10:28:08] 2024-06-21 08:27:47,759 | INFO     | chi2: 0.08636853889135346
[2024-06-21 10:28:08] 2024-06-21 08:27:47,759 | INFO     | current chi2=0.08636853889135346 (change=93.86235026297837 %)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,759 | INFO     | model: linear, x: [1718942411.0, 1718942472.0, 1718942533.0, 1718942594.0, 1718942655.0, 1718942716.0, 1718942777.0, 1718942838.0, 1718942899.0, 1718942960.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,759 | INFO     | sum of square deviations: 5640782972.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,761 | INFO     | sum of deviations: 1079279588.0000014
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | mean x: 1718950402.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | mean y: 2368901.323193916
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | -- intersect: -326526589.0496977
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | intersect: -326526589.0496977
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | chi2: 0.027863307986002818
[2024-06-21 10:28:08] 2024-06-21 08:27:47,762 | INFO     | current chi2=0.027863307986002818 (change=67.73905366043853 %)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,763 | INFO     | model: linear, x: [1718942716.0, 1718942777.0, 1718942838.0, 1718942899.0, 1718942960.0, 1718943021.0, 1718943082.0, 1718943143.0, 1718943204.0, 1718943265.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,763 | INFO     | sum of square deviations: 5325139844.5
[2024-06-21 10:28:08] 2024-06-21 08:27:47,765 | INFO     | sum of deviations: 3980257716.5000005
[2024-06-21 10:28:08] 2024-06-21 08:27:47,765 | INFO     | mean x: 1718950554.5
[2024-06-21 10:28:08] 2024-06-21 08:27:47,765 | INFO     | mean y: 2367499.406976744
[2024-06-21 10:28:08] 2024-06-21 08:27:47,765 | INFO     | -- intersect: -1282456262.713958
[2024-06-21 10:28:08] 2024-06-21 08:27:47,765 | INFO     | intersect: -1282456262.713958
[2024-06-21 10:28:08] 2024-06-21 08:27:47,766 | INFO     | chi2: 0.02271132097610234
[2024-06-21 10:28:08] 2024-06-21 08:27:47,766 | INFO     | current chi2=0.02271132097610234 (change=18.490220229732184 %)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,766 | INFO     | left removable region: 40
[2024-06-21 10:28:08] 2024-06-21 08:27:47,766 | INFO     | model: linear, x: [1718943936.0, 1718943997.0, 1718944058.0, 1718944119.0, 1718944180.0, 1718944241.0, 1718944302.0, 1718944363.0, 1718944424.0, 1718944485.0, 1718
[2024-06-21 10:28:08] 2024-06-21 08:27:47,766 | INFO     | sum of square deviations: 3871990738.0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,768 | INFO     | sum of deviations: 9138112624.999996
[2024-06-21 10:28:08] 2024-06-21 08:27:47,768 | INFO     | mean x: 1718950981.5
[2024-06-21 10:28:08] 2024-06-21 08:27:47,768 | INFO     | mean y: 2364480.2155172415
[2024-06-21 10:28:08] 2024-06-21 08:27:47,768 | INFO     | -- intersect: -4054455054.924932
[2024-06-21 10:28:08] 2024-06-21 08:27:47,768 | INFO     | intersect: -4054455054.924932
[2024-06-21 10:28:08] 2024-06-21 08:27:47,769 | INFO     | chi2: 0.0005866493132472235
[2024-06-21 10:28:08] 2024-06-21 08:27:47,769 | INFO     | -- intersect: -4054455054.924932
[2024-06-21 10:28:08] 2024-06-21 08:27:47,769 | INFO     | current memory leak: 2.36 B/s (using 232 data points, chi2=0.00)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | ..............................
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . Timing measurements:
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . get job = 0 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . initial setup = 1 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . payload setup = 12 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . stage-in = 0 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . payload execution = 16965 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . stage-out = 1 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | . log creation = 0 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,770 | INFO     | ..............................
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | 
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | job summary report
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | --------------------------------------------------
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | PanDA job id: 6238847424
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | task id: 40024031
[2024-06-21 10:28:08] 2024-06-21 08:27:47,830 | INFO     | errors: (none)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | pilot state: finished 
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | transexitcode: 0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | exeerrorcode: 0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | exeerrordiag: 
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | exitcode: 0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | exitmsg: OK
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | cpuconsumptiontime: 64515 s
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | nevents: 400
[2024-06-21 10:28:08] 2024-06-21 08:27:47,831 | INFO     | neventsw: 0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | pid: 2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | pgrp: 2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | corecount: 4
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | event service: False
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | sizes: {0: 2386906, 1: 2386934, 10: 2387140, 11: 2387168, 16981: 2418835, 16983: 2427817, 16986: 2428001, 16993: 2428171}
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | --------------------------------------------------
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | 
[2024-06-21 10:28:08] 2024-06-21 08:27:47,832 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-21 10:28:08] 2024-06-21 08:27:47,861 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,861 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,861 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | job 6238847424 has completed (purged errors)
[2024-06-21 10:28:08] 2024-06-21 08:27:47,863 | INFO     | overall cleanup function is called
[2024-06-21 10:28:08] 2024-06-21 08:27:48,871 | INFO     | --- collectZombieJob: --- 10, [2066049]
[2024-06-21 10:28:08] 2024-06-21 08:27:48,871 | INFO     | zombie collector waiting for pid 2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:48,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 10:28:08] 2024-06-21 08:27:49,876 | INFO     | collected zombie processes
[2024-06-21 10:28:08] 2024-06-21 08:27:49,876 | INFO     | will now attempt to kill all subprocesses of pid=2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:50,018 | INFO     | process IDs to be killed: [2066049] (in reverse order)
[2024-06-21 10:28:08] 2024-06-21 08:27:50,117 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 10:28:08] 2024-06-21 08:27:50,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 10:28:08] 2024-06-21 08:27:50,124 | INFO     | did not find any defunct processes belonging to 2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:50,130 | INFO     | did not find any defunct processes belonging to 2066049
[2024-06-21 10:28:08] 2024-06-21 08:27:50,130 | INFO     | ready for new job
[2024-06-21 10:28:08] 2024-06-21 08:27:50,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 10:28:08] 2024-06-21 08:27:50,132 | INFO     | *************************************
[2024-06-21 10:28:08] 2024-06-21 08:27:50,132 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 10:28:08] 2024-06-21 08:27:50,132 | INFO     | *************************************
[2024-06-21 10:28:08] 2024-06-21 08:27:50,132 | INFO     | 
[2024-06-21 10:28:08] 2024-06-21 08:27:50,135 | INFO     | architecture information:
[2024-06-21 10:28:08] 2024-06-21 08:27:50,135 | INFO     | executing command: cat /etc/os-release
[2024-06-21 10:28:08] 2024-06-21 08:27:50,154 | INFO     | cat /etc/os-release:
[2024-06-21 10:28:08] NAME="CentOS Linux"
[2024-06-21 10:28:08] VERSION="7 (Core)"
[2024-06-21 10:28:08] ID="centos"
[2024-06-21 10:28:08] ID_LIKE="rhel fedora"
[2024-06-21 10:28:08] VERSION_ID="7"
[2024-06-21 10:28:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 10:28:08] ANSI_COLOR="0;31"
[2024-06-21 10:28:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 10:28:08] HOME_URL="https://www.centos.org/"
[2024-06-21 10:28:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 10:28:08] 
[2024-06-21 10:28:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 10:28:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 10:28:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 10:28:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 10:28:08] 
[2024-06-21 10:28:08] 2024-06-21 08:27:50,155 | INFO     | *************************************
[2024-06-21 10:28:08] 2024-06-21 08:27:50,657 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-21 10:28:08] 2024-06-21 08:27:50,681 | INFO     | sufficient remaining disk space (665554255872 B)
[2024-06-21 10:28:08] 2024-06-21 08:27:50,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 10:28:08] 2024-06-21 08:27:50,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 10:28:08] 2024-06-21 08:27:50,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 10:28:08] 2024-06-21 08:27:51,107 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 10:28:08] 2024-06-21 08:27:51,107 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 10:28:08] 2024-06-21 08:27:51,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:28:08] 2024-06-21 08:27:51,107 | INFO     | will abort loop
[2024-06-21 10:28:08] 2024-06-21 08:27:51,273 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 10:28:08] 2024-06-21 08:27:51,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 10:28:08] 2024-06-21 08:27:51,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 10:28:08] 2024-06-21 08:27:51,447 | INFO     | all data control threads have been joined
[2024-06-21 10:28:08] 2024-06-21 08:27:51,687 | INFO     | [job] retrieve thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:51,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 10:28:08] 2024-06-21 08:27:51,854 | INFO     | all payload control threads have been joined
[2024-06-21 10:28:08] 2024-06-21 08:27:52,045 | INFO     | [data] copytool_in thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,097 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,112 | INFO     | [job] job monitor thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,168 | INFO     | all job control threads have been joined
[2024-06-21 10:28:08] 2024-06-21 08:27:52,269 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,452 | INFO     | [data] control thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,836 | INFO     | [data] copytool_out thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:28:08] 2024-06-21 08:27:52,855 | INFO     | [payload] control thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,900 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,961 | INFO     | [payload] failed_post thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:52,985 | INFO     | [job] validate thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:53,172 | INFO     | [job] control thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:53,206 | INFO     | [payload] validate_post thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:53,845 | INFO     | [job] queue monitor thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:27:55,833 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:28:00,826 | INFO     | job.realtimelogging is not enabled
[2024-06-21 10:28:08] 2024-06-21 08:28:01,831 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 10:28:08] 2024-06-21 08:28:02,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47579071689792)>', '<ExcThread(monitor, started 47579387672320)>']
[2024-06-21 10:28:08] 2024-06-21 08:28:02,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 10:28:08] 2024-06-21 08:28:02,327 | INFO     | [monitor] control thread has ended
[2024-06-21 10:28:08] 2024-06-21 08:28:07,181 | INFO     | all workflow threads have been joined
[2024-06-21 10:28:08] 2024-06-21 08:28:07,181 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 10:28:08] 2024-06-21 08:28:07,181 | INFO     | traces error code: 0
[2024-06-21 10:28:08] 2024-06-21 08:28:07,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 10:28:08] 2024-06-21 08:28:07,300 [wrapper] ==== pilot stdout END ====
[2024-06-21 10:28:08] 2024-06-21 08:28:07,306 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 10:28:08] 2024-06-21 08:28:07,310 [wrapper] pilotpid: 2058940
[2024-06-21 10:28:08] 2024-06-21 08:28:07,314 [wrapper] Pilot exit status: 0
[2024-06-21 10:28:08] 2024-06-21 08:28:07,351 [wrapper] pandaids: 6238847424
[2024-06-21 10:28:08] 2024-06-21 08:28:07,430 [wrapper] cleanup supervisor_pilot 2712135 2058941
[2024-06-21 10:28:08] 2024-06-21 08:28:07,432 [wrapper] Test setup, not cleaning
[2024-06-21 10:28:08] 2024-06-21 08:28:07,435 [wrapper] ==== wrapper stdout END ====
[2024-06-21 10:28:08] 2024-06-21 08:28:07,437 [wrapper] ==== wrapper stderr END ====
[2024-06-21 10:28:08] 2024-06-21 08:28:07,442 [wrapper] apfmon messages muted
[2024-06-21 10:28:08]  *** Error codes and diagnostics ***
[2024-06-21 10:28:08]     "exeErrorCode": 0,
[2024-06-21 10:28:08]     "exeErrorDiag": "",
[2024-06-21 10:28:08]     "pilotErrorCode": 0,
[2024-06-21 10:28:08]     "pilotErrorDiag": "",
[2024-06-21 10:28:08]  *** Listing of results directory ***
[2024-06-21 10:28:08] total 845156
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:33 pilot3.tar.gz
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:54 queuedata.json
[2024-06-21 10:28:08] -rwx------ 1 boinc boinc     32308 Jun 20 13:56 runpilot2-wrapper.sh
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 10:28:08] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:43 run_atlas
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:43 job.xml
[2024-06-21 10:28:08] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:43 shared
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc    482505 Jun 21 05:43 input.tar.gz
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc      6661 Jun 21 05:43 init_data.xml
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc 597143868 Jun 21 05:43 EVNT.40024029._000006.pool.root.1
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:43 start_atlas.sh
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:43 boinc_lockfile
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc      2569 Jun 21 05:44 pandaJob.out
[2024-06-21 10:28:08] -rw------- 1 boinc boinc       424 Jun 21 05:44 setup.sh.local
[2024-06-21 10:28:08] -rw------- 1 boinc boinc   1024126 Jun 21 05:44 agis_schedconf.cvmfs.json
[2024-06-21 10:28:08] -rw------- 1 boinc boinc   1321251 Jun 21 05:44 cric_ddmendpoints.json
[2024-06-21 10:28:08] drwx------ 4 boinc boinc      4096 Jun 21 05:44 pilot3
[2024-06-21 10:28:08] -rw------- 1 boinc boinc 260510420 Jun 21 10:27 HITS.40024031._000143.pool.root.1
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc       532 Jun 21 10:27 boinc_task_state.xml
[2024-06-21 10:28:08] -rw------- 1 boinc boinc        95 Jun 21 10:27 pilot_heartbeat.json
[2024-06-21 10:28:08] -rw------- 1 boinc boinc      1046 Jun 21 10:27 memory_monitor_summary.json
[2024-06-21 10:28:08] -rw------- 1 boinc boinc         0 Jun 21 10:27 agis_ddmendpoints.agis.ALL.json
[2024-06-21 10:28:08] -rw------- 1 boinc boinc    373085 Jun 21 10:27 log.40024031._000143.job.log.tgz.1
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc        28 Jun 21 10:27 wrapper_checkpoint.txt
[2024-06-21 10:28:08] -rw------- 1 boinc boinc      7760 Jun 21 10:27 heartbeat.json
[2024-06-21 10:28:08] -rw------- 1 boinc boinc      4479 Jun 21 10:28 pilotlog.txt
[2024-06-21 10:28:08] -rw------- 1 boinc boinc   1747522 Jun 21 10:28 log.40024031._000143.job.log.1
[2024-06-21 10:28:08] -rw------- 1 boinc boinc       357 Jun 21 10:28 output.list
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc       620 Jun 21 10:28 runtime_log
[2024-06-21 10:28:08] -rw------- 1 boinc boinc   2140160 Jun 21 10:28 result.tar.gz
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc     11410 Jun 21 10:28 runtime_log.err
[2024-06-21 10:28:08] -rw------- 1 boinc boinc       659 Jun 21 10:28 SZfLDmuZVe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm1FXKDmEMLmdn.diag
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc      8192 Jun 21 10:28 boinc_mmap_file
[2024-06-21 10:28:08] -rw-r--r-- 1 boinc boinc     21355 Jun 21 10:28 stderr.txt
[2024-06-21 10:28:08] HITS file was successfully produced:
[2024-06-21 10:28:08] -rw------- 1 boinc boinc 260510420 Jun 21 10:27 shared/HITS.pool.root.1
[2024-06-21 10:28:08]  *** Contents of shared directory: ***
[2024-06-21 10:28:08] total 840152
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc    482505 Jun 21 05:43 input.tar.gz
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc 597143868 Jun 21 05:43 ATLAS.root_0
[2024-06-21 10:28:08] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:43 start_atlas.sh
[2024-06-21 10:28:08] -rw------- 1 boinc boinc 260510420 Jun 21 10:27 HITS.pool.root.1
[2024-06-21 10:28:08] -rw------- 1 boinc boinc   2140160 Jun 21 10:28 result.tar.gz
10:28:09 (2054510): run_atlas exited; CPU time 64239.906086
10:28:09 (2054510): called boinc_finish(0)

</stderr_txt>
]]>

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