Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:12:27 (210906): wrapper (7.7.26015): starting
17:12:27 (210906): wrapper: running run_atlas (--nthreads 4)
[2024-06-20 17:12:27] Arguments: --nthreads 4
[2024-06-20 17:12:27] Threads: 4
[2024-06-20 17:12:27] Checking for CVMFS
[2024-06-20 17:12:27] No cvmfs_config command found, will try listing directly
[2024-06-20 17:12:27] CVMFS is ok
[2024-06-20 17:12:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 17:12:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 17:12:27] Further information can be found at the LHC@home message board.
[2024-06-20 17:12:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 17:12:27] Checking for apptainer binary...
[2024-06-20 17:12:27] which: no apptainer in ((null))
[2024-06-20 17:12:27] apptainer is not installed, using version from CVMFS
[2024-06-20 17:12:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 17:12:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-20 17:12:28] apptainer works
[2024-06-20 17:12:28] Set ATHENA_PROC_NUMBER=4
[2024-06-20 17:12:28] Set ATHENA_CORE_NUMBER=4
[2024-06-20 17:12:28] Starting ATLAS job with PandaID=6238845911
[2024-06-20 17:12:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 01:58:07]  *** The last 200 lines of the pilot log: ***
[2024-06-21 01:58:07] 2024-06-20 23:57:45,433 | INFO     | chi2: 1.7902963623594625
[2024-06-21 01:58:07] 2024-06-20 23:57:45,433 | INFO     | current chi2=1.7902963623594625 (change=59.17143865693253 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,434 | INFO     | model: linear, x: [1718896990.0, 1718897051.0, 1718897112.0, 1718897173.0, 1718897234.0, 1718897295.0, 1718897356.0, 1718897417.0, 1718897478.0, 1718897539.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,434 | INFO     | sum of square deviations: 40172446242.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,438 | INFO     | sum of deviations: 52859490616.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,438 | INFO     | mean x: 1718912392.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,438 | INFO     | mean y: 2384192.855731225
[2024-06-21 01:58:07] 2024-06-20 23:57:45,438 | INFO     | -- intersect: -2259385800.77274
[2024-06-21 01:58:07] 2024-06-20 23:57:45,439 | INFO     | intersect: -2259385800.77274
[2024-06-21 01:58:07] 2024-06-20 23:57:45,439 | INFO     | chi2: 0.12809197166854208
[2024-06-21 01:58:07] 2024-06-20 23:57:45,439 | INFO     | current chi2=0.12809197166854208 (change=92.84520851621866 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,439 | INFO     | model: linear, x: [1718897295.0, 1718897356.0, 1718897417.0, 1718897478.0, 1718897539.0, 1718897600.0, 1718897661.0, 1718897722.0, 1718897783.0, 1718897844.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,439 | INFO     | sum of square deviations: 38993289250.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | sum of deviations: 27326030187.999954
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | mean x: 1718912545.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | mean y: 2387487.858283433
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | -- intersect: -1202205840.8566525
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | intersect: -1202205840.8566525
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | chi2: 0.009833400787318642
[2024-06-21 01:58:07] 2024-06-20 23:57:45,444 | INFO     | current chi2=0.009833400787318642 (change=92.32317165609403 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,445 | INFO     | model: linear, x: [1718897600.0, 1718897661.0, 1718897722.0, 1718897783.0, 1718897844.0, 1718897905.0, 1718897966.0, 1718898027.0, 1718898088.0, 1718898149.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,445 | INFO     | sum of square deviations: 37837435020.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | sum of deviations: 21164780271.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | mean x: 1718912697.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | mean y: 2388299.7338709678
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | -- intersect: -959104188.548951
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | intersect: -959104188.548951
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | chi2: 0.004994750845126148
[2024-06-21 01:58:07] 2024-06-20 23:57:45,449 | INFO     | current chi2=0.004994750845126148 (change=49.20627204000998 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,450 | INFO     | model: linear, x: [1718897905.0, 1718897966.0, 1718898027.0, 1718898088.0, 1718898149.0, 1718898210.0, 1718898271.0, 1718898332.0, 1718898393.0, 1718898454.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,450 | INFO     | sum of square deviations: 36704650990.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | sum of deviations: 17016942836.000002
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | mean x: 1718912850.0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | mean y: 2388857.818737271
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | -- intersect: -794530358.671975
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | intersect: -794530358.671975
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | chi2: 0.002980307010148769
[2024-06-21 01:58:07] 2024-06-20 23:57:45,454 | INFO     | current chi2=0.002980307010148769 (change=40.33121766109841 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,455 | INFO     | model: linear, x: [1718898210.0, 1718898271.0, 1718898332.0, 1718898393.0, 1718898454.0, 1718898515.0, 1718898576.0, 1718898637.0, 1718898698.0, 1718898759.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,455 | INFO     | sum of square deviations: 35594704597.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | sum of deviations: 15007055421.999998
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | mean x: 1718913002.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | mean y: 2389133.5802469137
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | -- intersect: -722320426.0525557
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | intersect: -722320426.0525557
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | chi2: 0.0025530242459906975
[2024-06-21 01:58:07] 2024-06-20 23:57:45,459 | INFO     | current chi2=0.0025530242459906975 (change=14.336870755363648 %)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,460 | INFO     | left removable region: 60
[2024-06-21 01:58:07] 2024-06-20 23:57:45,460 | INFO     | model: linear, x: [1718900040.0, 1718900101.0, 1718900162.0, 1718900223.0, 1718900284.0, 1718900345.0, 1718900406.0, 1718900467.0, 1718900528.0, 1718900589.0, 1718
[2024-06-21 01:58:07] 2024-06-20 23:57:45,460 | INFO     | sum of square deviations: 28256204212.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | sum of deviations: 5121966778.499999
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | mean x: 1718913734.5
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | mean y: 2390578.948888889
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | -- intersect: -309194762.6987182
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | intersect: -309194762.6987182
[2024-06-21 01:58:07] 2024-06-20 23:57:45,463 | INFO     | chi2: 0.000741458782194571
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | -- intersect: -309194762.6987182
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | current memory leak: 0.18 B/s (using 450 data points, chi2=0.00)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | ..............................
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | . Timing measurements:
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | . get job = 0 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | . initial setup = 1 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,464 | INFO     | . payload setup = 4 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,465 | INFO     | . stage-in = 0 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,465 | INFO     | . payload execution = 31476 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,465 | INFO     | . stage-out = 1 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,465 | INFO     | . log creation = 0 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,465 | INFO     | ..............................
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | 
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | job summary report
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | --------------------------------------------------
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | PanDA job id: 6238845911
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | task id: 38921001
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | errors: (none)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | pilot state: finished 
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | transexitcode: 0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | exeerrorcode: 0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | exeerrordiag: 
[2024-06-21 01:58:07] 2024-06-20 23:57:45,521 | INFO     | exitcode: 0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | exitmsg: OK
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | cpuconsumptiontime: 121960 s
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | nevents: 400
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | neventsw: 0
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | pid: 249618
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | pgrp: 249618
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | corecount: 4
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | event service: False
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | sizes: {0: 2387075, 3: 2387281, 11: 2387309, 31485: 2425584, 31487: 2434566, 31489: 2434622, 31494: 2434920}
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | --------------------------------------------------
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | 
[2024-06-21 01:58:07] 2024-06-20 23:57:45,522 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | job 6238845911 has completed (purged errors)
[2024-06-21 01:58:07] 2024-06-20 23:57:45,540 | INFO     | overall cleanup function is called
[2024-06-21 01:58:07] 2024-06-20 23:57:46,547 | INFO     | --- collectZombieJob: --- 10, [249618]
[2024-06-21 01:58:07] 2024-06-20 23:57:46,547 | INFO     | zombie collector waiting for pid 249618
[2024-06-21 01:58:07] 2024-06-20 23:57:46,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 01:58:07] 2024-06-20 23:57:47,548 | INFO     | collected zombie processes
[2024-06-21 01:58:07] 2024-06-20 23:57:47,548 | INFO     | will now attempt to kill all subprocesses of pid=249618
[2024-06-21 01:58:07] 2024-06-20 23:57:47,687 | INFO     | process IDs to be killed: [249618] (in reverse order)
[2024-06-21 01:58:07] 2024-06-20 23:57:47,814 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 01:58:07] 2024-06-20 23:57:47,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 01:58:07] 2024-06-20 23:57:47,821 | INFO     | did not find any defunct processes belonging to 249618
[2024-06-21 01:58:07] 2024-06-20 23:57:47,827 | INFO     | did not find any defunct processes belonging to 249618
[2024-06-21 01:58:07] 2024-06-20 23:57:47,827 | INFO     | ready for new job
[2024-06-21 01:58:07] 2024-06-20 23:57:47,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 01:58:07] 2024-06-20 23:57:47,830 | INFO     | *************************************
[2024-06-21 01:58:07] 2024-06-20 23:57:47,830 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 01:58:07] 2024-06-20 23:57:47,830 | INFO     | *************************************
[2024-06-21 01:58:07] 2024-06-20 23:57:47,830 | INFO     | 
[2024-06-21 01:58:07] 2024-06-20 23:57:47,833 | INFO     | architecture information:
[2024-06-21 01:58:07] 2024-06-20 23:57:47,833 | INFO     | executing command: cat /etc/os-release
[2024-06-21 01:58:07] 2024-06-20 23:57:47,848 | INFO     | cat /etc/os-release:
[2024-06-21 01:58:07] NAME="CentOS Linux"
[2024-06-21 01:58:07] VERSION="7 (Core)"
[2024-06-21 01:58:07] ID="centos"
[2024-06-21 01:58:07] ID_LIKE="rhel fedora"
[2024-06-21 01:58:07] VERSION_ID="7"
[2024-06-21 01:58:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 01:58:07] ANSI_COLOR="0;31"
[2024-06-21 01:58:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 01:58:07] HOME_URL="https://www.centos.org/"
[2024-06-21 01:58:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 01:58:07] 
[2024-06-21 01:58:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 01:58:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 01:58:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 01:58:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 01:58:07] 
[2024-06-21 01:58:07] 2024-06-20 23:57:47,849 | INFO     | *************************************
[2024-06-21 01:58:07] 2024-06-20 23:57:48,352 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-06-21 01:58:07] 2024-06-20 23:57:48,371 | INFO     | sufficient remaining disk space (654420475904 B)
[2024-06-21 01:58:07] 2024-06-20 23:57:48,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 01:58:07] 2024-06-20 23:57:48,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 01:58:07] 2024-06-20 23:57:48,371 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 01:58:07] 2024-06-20 23:57:48,372 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 01:58:07] 2024-06-20 23:57:48,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 01:58:07] 2024-06-20 23:57:48,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 01:58:07] 2024-06-20 23:57:48,680 | INFO     | all payload control threads have been joined
[2024-06-21 01:58:07] 2024-06-20 23:57:48,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 01:58:07] 2024-06-20 23:57:48,924 | INFO     | all job control threads have been joined
[2024-06-21 01:58:07] 2024-06-20 23:57:48,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:58:07] 2024-06-20 23:57:48,926 | INFO     | aborting loop
[2024-06-21 01:58:07] 2024-06-20 23:57:49,167 | INFO     | all data control threads have been joined
[2024-06-21 01:58:07] 2024-06-20 23:57:49,376 | INFO     | [job] retrieve thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:49,437 | INFO     | [payload] failed_post thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:49,686 | INFO     | [payload] control thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:49,929 | INFO     | [job] control thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:49,931 | INFO     | [job] job monitor thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:49,996 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,053 | INFO     | [payload] validate_post thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,172 | INFO     | [data] control thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,199 | INFO     | [job] validate thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,206 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,438 | INFO     | [data] copytool_in thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,510 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:50,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:58:07] 2024-06-20 23:57:50,923 | INFO     | [data] copytool_out thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:51,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 01:58:07] 2024-06-20 23:57:51,532 | INFO     | [job] queue monitor thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:55,044 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:57:59,263 | INFO     | job.realtimelogging is not enabled
[2024-06-21 01:58:07] 2024-06-20 23:58:00,268 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 01:58:07] 2024-06-20 23:58:01,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47336231117888)>', '<ExcThread(monitor, started 47336417695488)>']
[2024-06-21 01:58:07] 2024-06-20 23:58:02,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 01:58:07] 2024-06-20 23:58:02,447 | INFO     | [monitor] control thread has ended
[2024-06-21 01:58:07] 2024-06-20 23:58:06,594 | INFO     | all workflow threads have been joined
[2024-06-21 01:58:07] 2024-06-20 23:58:06,594 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 01:58:07] 2024-06-20 23:58:06,594 | INFO     | traces error code: 0
[2024-06-21 01:58:07] 2024-06-20 23:58:06,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 01:58:07] 2024-06-20 23:58:06,728 [wrapper] ==== pilot stdout END ====
[2024-06-21 01:58:07] 2024-06-20 23:58:06,731 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 01:58:07] 2024-06-20 23:58:06,734 [wrapper] pilotpid: 240477
[2024-06-21 01:58:07] 2024-06-20 23:58:06,736 [wrapper] Pilot exit status: 0
[2024-06-21 01:58:07] 2024-06-20 23:58:06,749 [wrapper] pandaids: 6238845911
[2024-06-21 01:58:07] 2024-06-20 23:58:06,829 [wrapper] cleanup supervisor_pilot 1458264 240478
[2024-06-21 01:58:07] 2024-06-20 23:58:06,832 [wrapper] Test setup, not cleaning
[2024-06-21 01:58:07] 2024-06-20 23:58:06,834 [wrapper] ==== wrapper stdout END ====
[2024-06-21 01:58:07] 2024-06-20 23:58:06,837 [wrapper] ==== wrapper stderr END ====
[2024-06-21 01:58:07] 2024-06-20 23:58:06,841 [wrapper] apfmon messages muted
[2024-06-21 01:58:07]  *** Error codes and diagnostics ***
[2024-06-21 01:58:07]     "exeErrorCode": 0,
[2024-06-21 01:58:07]     "exeErrorDiag": "",
[2024-06-21 01:58:07]     "pilotErrorCode": 0,
[2024-06-21 01:58:07]     "pilotErrorDiag": "",
[2024-06-21 01:58:07]  *** Listing of results directory ***
[2024-06-21 01:58:07] total 954404
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:33 pilot3.tar.gz
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:50 queuedata.json
[2024-06-21 01:58:07] -rwx------ 1 boinc boinc     32308 Jun 20 13:51 runpilot2-wrapper.sh
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 01:58:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:11 run_atlas
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:11 job.xml
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc 615026760 Jun 20 17:12 EVNT.38776190._000669.pool.root.1
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:12 start_atlas.sh
[2024-06-21 01:58:07] drwxrwx--x 2 boinc boinc      4096 Jun 20 17:12 shared
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc    482539 Jun 20 17:12 input.tar.gz
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc      6660 Jun 20 17:12 init_data.xml
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc         0 Jun 20 17:12 boinc_lockfile
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc      2653 Jun 20 17:12 pandaJob.out
[2024-06-21 01:58:07] -rw------- 1 boinc boinc       424 Jun 20 17:12 setup.sh.local
[2024-06-21 01:58:07] -rw------- 1 boinc boinc   1015545 Jun 20 17:12 agis_schedconf.cvmfs.json
[2024-06-21 01:58:07] -rw------- 1 boinc boinc   1321254 Jun 20 17:12 cric_ddmendpoints.json
[2024-06-21 01:58:07] drwx------ 4 boinc boinc      4096 Jun 20 17:12 pilot3
[2024-06-21 01:58:07] -rw------- 1 boinc boinc 350052041 Jun 21 01:56 HITS.38921001._063081.pool.root.1
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc       533 Jun 21 01:57 boinc_task_state.xml
[2024-06-21 01:58:07] -rw------- 1 boinc boinc        95 Jun 21 01:57 pilot_heartbeat.json
[2024-06-21 01:58:07] -rw------- 1 boinc boinc      1048 Jun 21 01:57 memory_monitor_summary.json
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc        29 Jun 21 01:57 wrapper_checkpoint.txt
[2024-06-21 01:58:07] -rw------- 1 boinc boinc         0 Jun 21 01:57 agis_ddmendpoints.agis.ALL.json
[2024-06-21 01:58:07] -rw------- 1 boinc boinc    531925 Jun 21 01:57 log.38921001._063081.job.log.tgz.1
[2024-06-21 01:58:07] -rw------- 1 boinc boinc      7767 Jun 21 01:57 heartbeat.json
[2024-06-21 01:58:07] -rw------- 1 boinc boinc      4416 Jun 21 01:58 pilotlog.txt
[2024-06-21 01:58:07] -rw------- 1 boinc boinc   3818198 Jun 21 01:58 log.38921001._063081.job.log.1
[2024-06-21 01:58:07] -rw------- 1 boinc boinc       357 Jun 21 01:58 output.list
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc       620 Jun 21 01:58 runtime_log
[2024-06-21 01:58:07] -rw------- 1 boinc boinc   4372480 Jun 21 01:58 result.tar.gz
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc     11410 Jun 21 01:58 runtime_log.err
[2024-06-21 01:58:07] -rw------- 1 boinc boinc       659 Jun 21 01:58 NKhMDmqUVe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmhFXKDml8rNmm.diag
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc      8192 Jun 21 01:58 boinc_mmap_file
[2024-06-21 01:58:07] -rw-r--r-- 1 boinc boinc     21378 Jun 21 01:58 stderr.txt
[2024-06-21 01:58:07] HITS file was successfully produced:
[2024-06-21 01:58:07] -rw------- 1 boinc boinc 350052041 Jun 21 01:56 shared/HITS.pool.root.1
[2024-06-21 01:58:07]  *** Contents of shared directory: ***
[2024-06-21 01:58:07] total 947236
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc 615026760 Jun 20 17:12 ATLAS.root_0
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:12 start_atlas.sh
[2024-06-21 01:58:07] -rw-r--r-- 2 boinc boinc    482539 Jun 20 17:12 input.tar.gz
[2024-06-21 01:58:07] -rw------- 1 boinc boinc 350052041 Jun 21 01:56 HITS.pool.root.1
[2024-06-21 01:58:07] -rw------- 1 boinc boinc   4372480 Jun 21 01:58 result.tar.gz
01:58:08 (210906): run_atlas exited; CPU time 121520.300316
01:58:08 (210906): called boinc_finish(0)

</stderr_txt>
]]>

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