Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:18:52 (3205095): wrapper (7.7.26015): starting
13:18:52 (3205095): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 13:18:52] Arguments: --nthreads 4
[2024-06-21 13:18:52] Threads: 4
[2024-06-21 13:18:52] Checking for CVMFS
[2024-06-21 13:18:52] No cvmfs_config command found, will try listing directly
[2024-06-21 13:18:52] CVMFS is ok
[2024-06-21 13:18:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 13:18:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 13:18:52] Further information can be found at the LHC@home message board.
[2024-06-21 13:18:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 13:18:52] Checking for apptainer binary...
[2024-06-21 13:18:52] which: no apptainer in ((null))
[2024-06-21 13:18:52] apptainer is not installed, using version from CVMFS
[2024-06-21 13:18:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 13:18:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-06-21 13:18:53] apptainer works
[2024-06-21 13:18:53] Set ATHENA_PROC_NUMBER=4
[2024-06-21 13:18:53] Set ATHENA_CORE_NUMBER=4
[2024-06-21 13:18:53] Starting ATLAS job with PandaID=6238842775
[2024-06-21 13:18:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 17:54:29]  *** The last 200 lines of the pilot log: ***
[2024-06-21 17:54:29] 2024-06-21 15:54:16,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 17:54:29] 2024-06-21 15:54:16,343 | INFO     | fitting pss+swap vs Time
[2024-06-21 17:54:29] 2024-06-21 15:54:16,344 | INFO     | model: linear, x: [1718968799.0, 1718968860.0, 1718968921.0, 1718968982.0, 1718969043.0, 1718969104.0, 1718969165.0, 1718969226.0, 1718969287.0, 1718969348.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,344 | INFO     | sum of square deviations: 6103286527.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,346 | INFO     | sum of deviations: 9320432170.000011
[2024-06-21 17:54:29] 2024-06-21 15:54:16,346 | INFO     | mean x: 1718977003.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,346 | INFO     | mean y: 2399599.9111111113
[2024-06-21 17:54:29] 2024-06-21 15:54:16,347 | INFO     | -- intersect: -2622679280.2499228
[2024-06-21 17:54:29] 2024-06-21 15:54:16,347 | INFO     | intersect: -2622679280.2499228
[2024-06-21 17:54:29] 2024-06-21 15:54:16,347 | INFO     | chi2: 4.080704738015422
[2024-06-21 17:54:29] 2024-06-21 15:54:16,347 | INFO     | model: linear, x: [1718968799.0, 1718968860.0, 1718968921.0, 1718968982.0, 1718969043.0, 1718969104.0, 1718969165.0, 1718969226.0, 1718969287.0, 1718969348.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,348 | INFO     | sum of square deviations: 5770452380.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | sum of deviations: 9689631315.00002
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | mean x: 1718976851.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | mean y: 2399769.0905660377
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | -- intersect: -2884072699.3313503
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | intersect: -2884072699.3313503
[2024-06-21 17:54:29] 2024-06-21 15:54:16,350 | INFO     | chi2: 4.082633221330125
[2024-06-21 17:54:29] 2024-06-21 15:54:16,351 | INFO     | current chi2=4.082633221330125 (change=-0.04725858493847274 %)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,351 | INFO     | right removable region: 264
[2024-06-21 17:54:29] 2024-06-21 15:54:16,351 | INFO     | model: linear, x: [1718969104.0, 1718969165.0, 1718969226.0, 1718969287.0, 1718969348.0, 1718969409.0, 1718969470.0, 1718969531.0, 1718969592.0, 1718969653.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,351 | INFO     | sum of square deviations: 5770452380.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,353 | INFO     | sum of deviations: -52638110545.00002
[2024-06-21 17:54:29] 2024-06-21 15:54:16,353 | INFO     | mean x: 1718977156.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,353 | INFO     | mean y: 2427911.0981132076
[2024-06-21 17:54:29] 2024-06-21 15:54:16,353 | INFO     | -- intersect: 15682950615.9502
[2024-06-21 17:54:29] 2024-06-21 15:54:16,353 | INFO     | intersect: 15682950615.9502
[2024-06-21 17:54:29] 2024-06-21 15:54:16,354 | INFO     | chi2: 1.650063317424925
[2024-06-21 17:54:29] 2024-06-21 15:54:16,354 | INFO     | current chi2=1.650063317424925 (change=59.56425609397547 %)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,354 | INFO     | model: linear, x: [1718969409.0, 1718969470.0, 1718969531.0, 1718969592.0, 1718969653.0, 1718969714.0, 1718969775.0, 1718969836.0, 1718969897.0, 1718969958.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,354 | INFO     | sum of square deviations: 5449944045.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,356 | INFO     | sum of deviations: -98840098188.49997
[2024-06-21 17:54:29] 2024-06-21 15:54:16,356 | INFO     | mean x: 1718977308.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,357 | INFO     | mean y: 2449894.796153846
[2024-06-21 17:54:29] 2024-06-21 15:54:16,357 | INFO     | -- intersect: 31177794917.250126
[2024-06-21 17:54:29] 2024-06-21 15:54:16,357 | INFO     | intersect: 31177794917.250126
[2024-06-21 17:54:29] 2024-06-21 15:54:16,357 | INFO     | chi2: 0.3617080941474903
[2024-06-21 17:54:29] 2024-06-21 15:54:16,357 | INFO     | current chi2=0.3617080941474903 (change=78.07913851984972 %)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,358 | INFO     | model: linear, x: [1718969714.0, 1718969775.0, 1718969836.0, 1718969897.0, 1718969958.0, 1718970019.0, 1718970080.0, 1718970141.0, 1718970202.0, 1718970263.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,358 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | sum of deviations: -101488957156.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | mean x: 1718977461.0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | mean y: 2451160.964705882
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | -- intersect: 33933453251.743298
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | intersect: 33933453251.743298
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | chi2: 0.2912332238536728
[2024-06-21 17:54:29] 2024-06-21 15:54:16,360 | INFO     | current chi2=0.2912332238536728 (change=19.483907447501196 %)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,361 | INFO     | left removable region: 30
[2024-06-21 17:54:29] 2024-06-21 15:54:16,361 | INFO     | model: linear, x: [1718970629.0, 1718970690.0, 1718970751.0, 1718970812.0, 1718970873.0, 1718970934.0, 1718970995.0, 1718971056.0, 1718971117.0, 1718971178.0, 1718
[2024-06-21 17:54:29] 2024-06-21 15:54:16,361 | INFO     | sum of square deviations: 3972995422.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | sum of deviations: -79021018116.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | mean x: 1718977735.5
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | mean y: 2441542.7735042735
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | -- intersect: 34192103582.034428
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | intersect: 34192103582.034428
[2024-06-21 17:54:29] 2024-06-21 15:54:16,363 | INFO     | chi2: 0.28004391051127947
[2024-06-21 17:54:29] 2024-06-21 15:54:16,364 | INFO     | -- intersect: 34192103582.034428
[2024-06-21 17:54:29] 2024-06-21 15:54:16,364 | INFO     | current memory leak: -19.89 B/s (using 234 data points, chi2=0.28)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,364 | INFO     | ..............................
[2024-06-21 17:54:29] 2024-06-21 15:54:16,364 | INFO     | . Timing measurements:
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . get job = 0 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . initial setup = 1 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . payload setup = 13 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . stage-in = 0 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . payload execution = 16452 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . stage-out = 1 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | . log creation = 0 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,365 | INFO     | ..............................
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | 
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | job summary report
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | --------------------------------------------------
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | PanDA job id: 6238842775
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | task id: 40024049
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | errors: (none)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | pilot state: finished 
[2024-06-21 17:54:29] 2024-06-21 15:54:16,450 | INFO     | transexitcode: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | exeerrorcode: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | exeerrordiag: 
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | exitcode: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | exitmsg: OK
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | cpuconsumptiontime: 62822 s
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | nevents: 400
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | neventsw: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | pid: 3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | pgrp: 3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | corecount: 4
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | event service: False
[2024-06-21 17:54:29] 2024-06-21 15:54:16,451 | INFO     | sizes: {0: 2386858, 1: 2386886, 8: 2387092, 11: 2387120, 16469: 2418730, 16471: 2427896, 16479: 2428010}
[2024-06-21 17:54:29] 2024-06-21 15:54:16,452 | INFO     | --------------------------------------------------
[2024-06-21 17:54:29] 2024-06-21 15:54:16,452 | INFO     | 
[2024-06-21 17:54:29] 2024-06-21 15:54:16,452 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/1
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,474 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 17:54:29] 2024-06-21 15:54:16,474 | INFO     | job 6238842775 has completed (purged errors)
[2024-06-21 17:54:29] 2024-06-21 15:54:16,474 | INFO     | overall cleanup function is called
[2024-06-21 17:54:29] 2024-06-21 15:54:17,481 | INFO     | --- collectZombieJob: --- 10, [3217946]
[2024-06-21 17:54:29] 2024-06-21 15:54:17,481 | INFO     | zombie collector waiting for pid 3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:17,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 17:54:29] 2024-06-21 15:54:18,486 | INFO     | collected zombie processes
[2024-06-21 17:54:29] 2024-06-21 15:54:18,486 | INFO     | will now attempt to kill all subprocesses of pid=3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:18,649 | INFO     | process IDs to be killed: [3217946] (in reverse order)
[2024-06-21 17:54:29] 2024-06-21 15:54:18,775 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 17:54:29] 2024-06-21 15:54:18,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 17:54:29] 2024-06-21 15:54:18,786 | INFO     | did not find any defunct processes belonging to 3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:18,795 | INFO     | did not find any defunct processes belonging to 3217946
[2024-06-21 17:54:29] 2024-06-21 15:54:18,795 | INFO     | ready for new job
[2024-06-21 17:54:29] 2024-06-21 15:54:18,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 17:54:29] 2024-06-21 15:54:18,797 | INFO     | *************************************
[2024-06-21 17:54:29] 2024-06-21 15:54:18,798 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 17:54:29] 2024-06-21 15:54:18,798 | INFO     | *************************************
[2024-06-21 17:54:29] 2024-06-21 15:54:18,798 | INFO     | 
[2024-06-21 17:54:29] 2024-06-21 15:54:18,802 | INFO     | architecture information:
[2024-06-21 17:54:29] 2024-06-21 15:54:18,802 | INFO     | executing command: cat /etc/os-release
[2024-06-21 17:54:29] 2024-06-21 15:54:18,819 | INFO     | cat /etc/os-release:
[2024-06-21 17:54:29] NAME="CentOS Linux"
[2024-06-21 17:54:29] VERSION="7 (Core)"
[2024-06-21 17:54:29] ID="centos"
[2024-06-21 17:54:29] ID_LIKE="rhel fedora"
[2024-06-21 17:54:29] VERSION_ID="7"
[2024-06-21 17:54:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 17:54:29] ANSI_COLOR="0;31"
[2024-06-21 17:54:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 17:54:29] HOME_URL="https://www.centos.org/"
[2024-06-21 17:54:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 17:54:29] 
[2024-06-21 17:54:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 17:54:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 17:54:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 17:54:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 17:54:29] 
[2024-06-21 17:54:29] 2024-06-21 15:54:18,819 | INFO     | *************************************
[2024-06-21 17:54:29] 2024-06-21 15:54:19,322 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/1
[2024-06-21 17:54:29] 2024-06-21 15:54:19,344 | INFO     | sufficient remaining disk space (654050328576 B)
[2024-06-21 17:54:29] 2024-06-21 15:54:19,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 17:54:29] 2024-06-21 15:54:19,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 17:54:29] 2024-06-21 15:54:19,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 17:54:29] 2024-06-21 15:54:19,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 17:54:29] 2024-06-21 15:54:19,401 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 17:54:29] 2024-06-21 15:54:19,402 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 17:54:29] 2024-06-21 15:54:19,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:54:29] 2024-06-21 15:54:19,402 | INFO     | will abort loop
[2024-06-21 17:54:29] 2024-06-21 15:54:19,531 | INFO     | all job control threads have been joined
[2024-06-21 17:54:29] 2024-06-21 15:54:19,557 | INFO     | all data control threads have been joined
[2024-06-21 17:54:29] 2024-06-21 15:54:19,640 | INFO     | all payload control threads have been joined
[2024-06-21 17:54:29] 2024-06-21 15:54:20,214 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 17:54:29] 2024-06-21 15:54:20,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 17:54:29] 2024-06-21 15:54:20,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 17:54:29] 2024-06-21 15:54:20,348 | INFO     | [job] retrieve thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:20,406 | INFO     | [job] job monitor thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:20,486 | INFO     | [payload] validate_post thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:20,536 | INFO     | [job] control thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:20,562 | INFO     | [data] control thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:20,645 | INFO     | [payload] control thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,057 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,058 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,134 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,283 | INFO     | [data] copytool_in thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,351 | INFO     | [data] copytool_out thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,394 | INFO     | [job] validate thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 17:54:29] 2024-06-21 15:54:21,592 | INFO     | [payload] failed_post thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:21,619 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:22,464 | INFO     | [job] queue monitor thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:23,351 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 17:54:29] 2024-06-21 15:54:23,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47918187938880)>', '<ExcThread(monitor, started 47918372415232)>']
[2024-06-21 17:54:29] 2024-06-21 15:54:24,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 17:54:29] 2024-06-21 15:54:24,234 | INFO     | [monitor] control thread has ended
[2024-06-21 17:54:29] 2024-06-21 15:54:28,544 | INFO     | all workflow threads have been joined
[2024-06-21 17:54:29] 2024-06-21 15:54:28,544 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 17:54:29] 2024-06-21 15:54:28,544 | INFO     | traces error code: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:28,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 17:54:29] 2024-06-21 15:54:28,654 [wrapper] ==== pilot stdout END ====
[2024-06-21 17:54:29] 2024-06-21 15:54:28,657 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 17:54:29] 2024-06-21 15:54:28,659 [wrapper] pilotpid: 3209523
[2024-06-21 17:54:29] 2024-06-21 15:54:28,661 [wrapper] Pilot exit status: 0
[2024-06-21 17:54:29] 2024-06-21 15:54:28,696 [wrapper] pandaids: 6238842775
[2024-06-21 17:54:29] 2024-06-21 15:54:28,757 [wrapper] cleanup supervisor_pilot 3812833 3209524
[2024-06-21 17:54:29] 2024-06-21 15:54:28,759 [wrapper] Test setup, not cleaning
[2024-06-21 17:54:29] 2024-06-21 15:54:28,762 [wrapper] ==== wrapper stdout END ====
[2024-06-21 17:54:29] 2024-06-21 15:54:28,764 [wrapper] ==== wrapper stderr END ====
[2024-06-21 17:54:29] 2024-06-21 15:54:28,768 [wrapper] apfmon messages muted
[2024-06-21 17:54:29]  *** Error codes and diagnostics ***
[2024-06-21 17:54:29]     "exeErrorCode": 0,
[2024-06-21 17:54:29]     "exeErrorDiag": "",
[2024-06-21 17:54:29]     "pilotErrorCode": 0,
[2024-06-21 17:54:29]     "pilotErrorDiag": "",
[2024-06-21 17:54:29]  *** Listing of results directory ***
[2024-06-21 17:54:29] total 879740
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:33 pilot3.tar.gz
[2024-06-21 17:54:29] -rwx------ 1 boinc boinc     32308 Jun 20 13:47 runpilot2-wrapper.sh
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:47 queuedata.json
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc       100 Jun 21 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 17:54:29] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 13:18 run_atlas
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc       105 Jun 21 13:18 job.xml
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 13:18 EVNT.40024047._000021.pool.root.1
[2024-06-21 17:54:29] drwxrwx--x 2 boinc boinc      4096 Jun 21 13:18 shared
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc    482474 Jun 21 13:18 input.tar.gz
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc      6661 Jun 21 13:18 init_data.xml
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc     17537 Jun 21 13:18 start_atlas.sh
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc         0 Jun 21 13:18 boinc_lockfile
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc      2493 Jun 21 13:18 pandaJob.out
[2024-06-21 17:54:29] -rw------- 1 boinc boinc       424 Jun 21 13:18 setup.sh.local
[2024-06-21 17:54:29] -rw------- 1 boinc boinc   1023843 Jun 21 13:19 agis_schedconf.cvmfs.json
[2024-06-21 17:54:29] -rw------- 1 boinc boinc   1321251 Jun 21 13:19 cric_ddmendpoints.json
[2024-06-21 17:54:29] drwx------ 4 boinc boinc      4096 Jun 21 13:19 pilot3
[2024-06-21 17:54:29] -rw------- 1 boinc boinc 277718999 Jun 21 17:53 HITS.40024049._000209.pool.root.1
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc       532 Jun 21 17:53 boinc_task_state.xml
[2024-06-21 17:54:29] -rw------- 1 boinc boinc      1047 Jun 21 17:54 memory_monitor_summary.json
[2024-06-21 17:54:29] -rw------- 1 boinc boinc         0 Jun 21 17:54 agis_ddmendpoints.agis.ALL.json
[2024-06-21 17:54:29] -rw------- 1 boinc boinc    359965 Jun 21 17:54 log.40024049._000209.job.log.tgz.1
[2024-06-21 17:54:29] -rw------- 1 boinc boinc        95 Jun 21 17:54 pilot_heartbeat.json
[2024-06-21 17:54:29] -rw------- 1 boinc boinc      7761 Jun 21 17:54 heartbeat.json
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc      8192 Jun 21 17:54 boinc_mmap_file
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc        28 Jun 21 17:54 wrapper_checkpoint.txt
[2024-06-21 17:54:29] -rw------- 1 boinc boinc      4407 Jun 21 17:54 pilotlog.txt
[2024-06-21 17:54:29] -rw------- 1 boinc boinc   1688646 Jun 21 17:54 log.40024049._000209.job.log.1
[2024-06-21 17:54:29] -rw------- 1 boinc boinc       357 Jun 21 17:54 output.list
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc       620 Jun 21 17:54 runtime_log
[2024-06-21 17:54:29] -rw------- 1 boinc boinc   2068480 Jun 21 17:54 result.tar.gz
[2024-06-21 17:54:29] -rw------- 1 boinc boinc       659 Jun 21 17:54 s43LDmkRVe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmc8kKDm6L4xnm.diag
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc     11410 Jun 21 17:54 runtime_log.err
[2024-06-21 17:54:29] -rw-r--r-- 1 boinc boinc     21305 Jun 21 17:54 stderr.txt
[2024-06-21 17:54:29] HITS file was successfully produced:
[2024-06-21 17:54:29] -rw------- 1 boinc boinc 277718999 Jun 21 17:53 shared/HITS.pool.root.1
[2024-06-21 17:54:29]  *** Contents of shared directory: ***
[2024-06-21 17:54:29] total 874812
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 13:18 ATLAS.root_0
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc    482474 Jun 21 13:18 input.tar.gz
[2024-06-21 17:54:29] -rw-r--r-- 2 boinc boinc     17537 Jun 21 13:18 start_atlas.sh
[2024-06-21 17:54:29] -rw------- 1 boinc boinc 277718999 Jun 21 17:53 HITS.pool.root.1
[2024-06-21 17:54:29] -rw------- 1 boinc boinc   2068480 Jun 21 17:54 result.tar.gz
17:54:30 (3205095): run_atlas exited; CPU time 62534.878862
17:54:30 (3205095): called boinc_finish(0)

</stderr_txt>
]]>

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