Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:09 (144981): wrapper (7.7.26015): starting
21:26:09 (144981): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 21:26:09] Arguments: --nthreads 4
[2024-06-21 21:26:09] Threads: 4
[2024-06-21 21:26:09] Checking for CVMFS
[2024-06-21 21:26:09] No cvmfs_config command found, will try listing directly
[2024-06-21 21:26:09] CVMFS is ok
[2024-06-21 21:26:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 21:26:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 21:26:09] Further information can be found at the LHC@home message board.
[2024-06-21 21:26:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 21:26:09] Checking for apptainer binary...
[2024-06-21 21:26:09] which: no apptainer in ((null))
[2024-06-21 21:26:09] apptainer is not installed, using version from CVMFS
[2024-06-21 21:26:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 21:26:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-06-21 21:26:11] apptainer works
[2024-06-21 21:26:11] Set ATHENA_PROC_NUMBER=4
[2024-06-21 21:26:11] Set ATHENA_CORE_NUMBER=4
[2024-06-21 21:26:11] Starting ATLAS job with PandaID=6238842783
[2024-06-21 21:26:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 02:03:34]  *** The last 200 lines of the pilot log: ***
[2024-06-22 02:03:34] 2024-06-22 00:03:12,664 | INFO     | fitting pss+swap vs Time
[2024-06-22 02:03:34] 2024-06-22 00:03:12,664 | INFO     | model: linear, x: [1718998024.0, 1718998085.0, 1718998146.0, 1718998207.0, 1718998268.0, 1718998329.0, 1718998390.0, 1718998451.0, 1718998512.0, 1718998573.0, 1718
[2024-06-22 02:03:34] 2024-06-22 00:03:12,665 | INFO     | sum of square deviations: 6239923508.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | sum of deviations: 41235130841.500015
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | mean x: 1719006289.5
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | mean y: 2362798.8713235296
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | -- intersect: -11357303577.489962
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | intersect: -11357303577.489962
[2024-06-22 02:03:34] 2024-06-22 00:03:12,667 | INFO     | chi2: 4.475441564262221
[2024-06-22 02:03:34] 2024-06-22 00:03:12,668 | INFO     | model: linear, x: [1718998024.0, 1718998085.0, 1718998146.0, 1718998207.0, 1718998268.0, 1718998329.0, 1718998390.0, 1718998451.0, 1718998512.0, 1718998573.0, 1718
[2024-06-22 02:03:34] 2024-06-22 00:03:12,668 | INFO     | sum of square deviations: 5902093918.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,670 | INFO     | sum of deviations: 58067116095.999985
[2024-06-22 02:03:34] 2024-06-22 00:03:12,670 | INFO     | mean x: 1719006137.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,670 | INFO     | mean y: 2370277.5393258426
[2024-06-22 02:03:34] 2024-06-22 00:03:12,670 | INFO     | -- intersect: -16909886679.689842
[2024-06-22 02:03:34] 2024-06-22 00:03:12,670 | INFO     | intersect: -16909886679.689842
[2024-06-22 02:03:34] 2024-06-22 00:03:12,671 | INFO     | chi2: 3.679570649949194
[2024-06-22 02:03:34] 2024-06-22 00:03:12,671 | INFO     | current chi2=3.679570649949194 (change=17.783070181684447 %)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,671 | INFO     | right removable region: 266
[2024-06-22 02:03:34] 2024-06-22 00:03:12,671 | INFO     | model: linear, x: [1718998329.0, 1718998390.0, 1718998451.0, 1718998512.0, 1718998573.0, 1718998634.0, 1718998695.0, 1718998756.0, 1718998817.0, 1718998878.0, 1718
[2024-06-22 02:03:34] 2024-06-22 00:03:12,671 | INFO     | sum of square deviations: 5902093918.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,673 | INFO     | sum of deviations: -18286103590.000004
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | mean x: 1719006442.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | mean y: 2389596.161048689
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | -- intersect: 5328284152.739221
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | intersect: 5328284152.739221
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | chi2: 2.2720317699498436
[2024-06-22 02:03:34] 2024-06-22 00:03:12,674 | INFO     | current chi2=2.2720317699498436 (change=49.233349663355746 %)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,675 | INFO     | model: linear, x: [1718998634.0, 1718998695.0, 1718998756.0, 1718998817.0, 1718998878.0, 1718998939.0, 1718999000.0, 1718999061.0, 1718999122.0, 1718999183.0, 1718
[2024-06-22 02:03:34] 2024-06-22 00:03:12,675 | INFO     | sum of square deviations: 5576683165.5
[2024-06-22 02:03:34] 2024-06-22 00:03:12,677 | INFO     | sum of deviations: -63224194962.499985
[2024-06-22 02:03:34] 2024-06-22 00:03:12,677 | INFO     | mean x: 1719006594.5
[2024-06-22 02:03:34] 2024-06-22 00:03:12,677 | INFO     | mean y: 2410656.263358779
[2024-06-22 02:03:34] 2024-06-22 00:03:12,677 | INFO     | -- intersect: 19491200829.041046
[2024-06-22 02:03:34] 2024-06-22 00:03:12,677 | INFO     | intersect: 19491200829.041046
[2024-06-22 02:03:34] 2024-06-22 00:03:12,678 | INFO     | chi2: 1.1106917546773025
[2024-06-22 02:03:34] 2024-06-22 00:03:12,678 | INFO     | current chi2=1.1106917546773025 (change=51.114602825213936 %)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,678 | INFO     | model: linear, x: [1718998939.0, 1718999000.0, 1718999061.0, 1718999122.0, 1718999183.0, 1718999244.0, 1718999305.0, 1718999366.0, 1718999427.0, 1718999488.0, 1718
[2024-06-22 02:03:34] 2024-06-22 00:03:12,678 | INFO     | sum of square deviations: 5263458688.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,680 | INFO     | sum of deviations: -65217933083.999985
[2024-06-22 02:03:34] 2024-06-22 00:03:12,680 | INFO     | mean x: 1719006747.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,680 | INFO     | mean y: 2411602.0778210117
[2024-06-22 02:03:34] 2024-06-22 00:03:12,680 | INFO     | -- intersect: 21302107038.538036
[2024-06-22 02:03:34] 2024-06-22 00:03:12,680 | INFO     | intersect: 21302107038.538036
[2024-06-22 02:03:34] 2024-06-22 00:03:12,681 | INFO     | chi2: 1.0756414934672986
[2024-06-22 02:03:34] 2024-06-22 00:03:12,681 | INFO     | current chi2=1.0756414934672986 (change=3.155714541176844 %)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,681 | INFO     | left removable region: 30
[2024-06-22 02:03:34] 2024-06-22 00:03:12,681 | INFO     | model: linear, x: [1718999854.0, 1718999915.0, 1718999976.0, 1719000037.0, 1719000098.0, 1719000159.0, 1719000220.0, 1719000281.0, 1719000342.0, 1719000403.0, 1719
[2024-06-22 02:03:34] 2024-06-22 00:03:12,681 | INFO     | sum of square deviations: 4075741535.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,683 | INFO     | sum of deviations: -23573943246.0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,683 | INFO     | mean x: 1719007021.5
[2024-06-22 02:03:34] 2024-06-22 00:03:12,683 | INFO     | mean y: 2407437.0423728814
[2024-06-22 02:03:34] 2024-06-22 00:03:12,683 | INFO     | -- intersect: 9945082559.182203
[2024-06-22 02:03:34] 2024-06-22 00:03:12,683 | INFO     | intersect: 9945082559.182203
[2024-06-22 02:03:34] 2024-06-22 00:03:12,684 | INFO     | chi2: 0.18043257188858142
[2024-06-22 02:03:34] 2024-06-22 00:03:12,684 | INFO     | -- intersect: 9945082559.182203
[2024-06-22 02:03:34] 2024-06-22 00:03:12,684 | INFO     | current memory leak: -5.78 B/s (using 236 data points, chi2=0.18)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | ..............................
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . Timing measurements:
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . get job = 0 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . initial setup = 1 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . payload setup = 8 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . stage-in = 0 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . payload execution = 16564 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . stage-out = 1 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | . log creation = 0 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,685 | INFO     | ..............................
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | 
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | job summary report
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | --------------------------------------------------
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | PanDA job id: 6238842783
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | task id: 40024049
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | errors: (none)
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | pilot state: finished 
[2024-06-22 02:03:34] 2024-06-22 00:03:12,983 | INFO     | transexitcode: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | exeerrorcode: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | exeerrordiag: 
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | exitcode: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | exitmsg: OK
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | cpuconsumptiontime: 62682 s
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | nevents: 400
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | neventsw: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | pid: 156481
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | pgrp: 156481
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | corecount: 4
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | event service: False
[2024-06-22 02:03:34] 2024-06-22 00:03:12,984 | INFO     | sizes: {0: 2386707, 1: 2386906, 11: 2387112, 12: 2387140, 16577: 2418683, 16578: 2427849, 16585: 2427963}
[2024-06-22 02:03:34] 2024-06-22 00:03:12,985 | INFO     | --------------------------------------------------
[2024-06-22 02:03:34] 2024-06-22 00:03:12,985 | INFO     | 
[2024-06-22 02:03:34] 2024-06-22 00:03:12,985 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-22 02:03:34] 2024-06-22 00:03:13,015 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 02:03:34] 2024-06-22 00:03:13,017 | INFO     | job 6238842783 has completed (purged errors)
[2024-06-22 02:03:34] 2024-06-22 00:03:13,018 | INFO     | overall cleanup function is called
[2024-06-22 02:03:34] 2024-06-22 00:03:14,025 | INFO     | --- collectZombieJob: --- 10, [156481]
[2024-06-22 02:03:34] 2024-06-22 00:03:14,025 | INFO     | zombie collector waiting for pid 156481
[2024-06-22 02:03:34] 2024-06-22 00:03:14,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 02:03:34] 2024-06-22 00:03:15,030 | INFO     | collected zombie processes
[2024-06-22 02:03:34] 2024-06-22 00:03:15,030 | INFO     | will now attempt to kill all subprocesses of pid=156481
[2024-06-22 02:03:34] 2024-06-22 00:03:15,235 | INFO     | process IDs to be killed: [156481] (in reverse order)
[2024-06-22 02:03:34] 2024-06-22 00:03:15,365 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 02:03:34] 2024-06-22 00:03:15,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 02:03:34] 2024-06-22 00:03:15,375 | INFO     | did not find any defunct processes belonging to 156481
[2024-06-22 02:03:34] 2024-06-22 00:03:15,384 | INFO     | did not find any defunct processes belonging to 156481
[2024-06-22 02:03:34] 2024-06-22 00:03:15,384 | INFO     | ready for new job
[2024-06-22 02:03:34] 2024-06-22 00:03:15,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 02:03:34] 2024-06-22 00:03:15,387 | INFO     | *************************************
[2024-06-22 02:03:34] 2024-06-22 00:03:15,387 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 02:03:34] 2024-06-22 00:03:15,387 | INFO     | *************************************
[2024-06-22 02:03:34] 2024-06-22 00:03:15,387 | INFO     | 
[2024-06-22 02:03:34] 2024-06-22 00:03:15,391 | INFO     | architecture information:
[2024-06-22 02:03:34] 2024-06-22 00:03:15,391 | INFO     | executing command: cat /etc/os-release
[2024-06-22 02:03:34] 2024-06-22 00:03:15,410 | INFO     | cat /etc/os-release:
[2024-06-22 02:03:34] NAME="CentOS Linux"
[2024-06-22 02:03:34] VERSION="7 (Core)"
[2024-06-22 02:03:34] ID="centos"
[2024-06-22 02:03:34] ID_LIKE="rhel fedora"
[2024-06-22 02:03:34] VERSION_ID="7"
[2024-06-22 02:03:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 02:03:34] ANSI_COLOR="0;31"
[2024-06-22 02:03:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 02:03:34] HOME_URL="https://www.centos.org/"
[2024-06-22 02:03:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 02:03:34] 
[2024-06-22 02:03:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 02:03:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 02:03:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 02:03:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 02:03:34] 
[2024-06-22 02:03:34] 2024-06-22 00:03:15,410 | INFO     | *************************************
[2024-06-22 02:03:34] 2024-06-22 00:03:15,912 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-22 02:03:34] 2024-06-22 00:03:15,933 | INFO     | sufficient remaining disk space (653004898304 B)
[2024-06-22 02:03:34] 2024-06-22 00:03:15,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 02:03:34] 2024-06-22 00:03:15,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 02:03:34] 2024-06-22 00:03:15,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 02:03:34] 2024-06-22 00:03:16,010 | INFO     | all payload control threads have been joined
[2024-06-22 02:03:34] 2024-06-22 00:03:16,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 02:03:34] 2024-06-22 00:03:16,212 | INFO     | all data control threads have been joined
[2024-06-22 02:03:34] 2024-06-22 00:03:16,380 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 02:03:34] 2024-06-22 00:03:16,380 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 02:03:34] 2024-06-22 00:03:16,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:03:34] 2024-06-22 00:03:16,381 | INFO     | will abort loop
[2024-06-22 02:03:34] 2024-06-22 00:03:16,835 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 02:03:34] 2024-06-22 00:03:16,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 02:03:34] 2024-06-22 00:03:16,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 02:03:34] 2024-06-22 00:03:16,939 | INFO     | [job] retrieve thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,015 | INFO     | [payload] control thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,022 | INFO     | all job control threads have been joined
[2024-06-22 02:03:34] 2024-06-22 00:03:17,056 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,219 | INFO     | [data] control thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,320 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,386 | INFO     | [job] job monitor thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:03:34] 2024-06-22 00:03:17,856 | INFO     | [payload] failed_post thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,958 | INFO     | [payload] validate_post thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:17,973 | INFO     | [data] copytool_out thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:18,027 | INFO     | [job] control thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:18,164 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:18,171 | INFO     | [data] copytool_in thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:18,272 | INFO     | [job] validate thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:18,759 | INFO     | [job] queue monitor thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:20,053 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:26,722 | INFO     | job.realtimelogging is not enabled
[2024-06-22 02:03:34] 2024-06-22 00:03:27,727 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 02:03:34] 2024-06-22 00:03:28,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47869868921920)>', '<ExcThread(monitor, started 47870049195776)>']
[2024-06-22 02:03:34] 2024-06-22 00:03:28,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 02:03:34] 2024-06-22 00:03:28,895 | INFO     | [monitor] control thread has ended
[2024-06-22 02:03:34] 2024-06-22 00:03:33,145 | INFO     | all workflow threads have been joined
[2024-06-22 02:03:34] 2024-06-22 00:03:33,145 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 02:03:34] 2024-06-22 00:03:33,145 | INFO     | traces error code: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:33,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 02:03:34] 2024-06-22 00:03:33,275 [wrapper] ==== pilot stdout END ====
[2024-06-22 02:03:34] 2024-06-22 00:03:33,278 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 02:03:34] 2024-06-22 00:03:33,280 [wrapper] pilotpid: 149428
[2024-06-22 02:03:34] 2024-06-22 00:03:33,282 [wrapper] Pilot exit status: 0
[2024-06-22 02:03:34] 2024-06-22 00:03:33,291 [wrapper] pandaids: 6238842783
[2024-06-22 02:03:34] 2024-06-22 00:03:33,369 [wrapper] cleanup supervisor_pilot  766106 149429
[2024-06-22 02:03:34] 2024-06-22 00:03:33,372 [wrapper] Test setup, not cleaning
[2024-06-22 02:03:34] 2024-06-22 00:03:33,374 [wrapper] ==== wrapper stdout END ====
[2024-06-22 02:03:34] 2024-06-22 00:03:33,377 [wrapper] ==== wrapper stderr END ====
[2024-06-22 02:03:34] 2024-06-22 00:03:33,382 [wrapper] apfmon messages muted
[2024-06-22 02:03:34]  *** Error codes and diagnostics ***
[2024-06-22 02:03:34]     "exeErrorCode": 0,
[2024-06-22 02:03:34]     "exeErrorDiag": "",
[2024-06-22 02:03:34]     "pilotErrorCode": 0,
[2024-06-22 02:03:34]     "pilotErrorDiag": "",
[2024-06-22 02:03:34]  *** Listing of results directory ***
[2024-06-22 02:03:34] total 882688
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:33 pilot3.tar.gz
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:44 queuedata.json
[2024-06-22 02:03:34] -rwx------ 1 boinc boinc     32308 Jun 20 13:45 runpilot2-wrapper.sh
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc       100 Jun 21 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 02:03:34] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 21:26 run_atlas
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc       105 Jun 21 21:26 job.xml
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc      6661 Jun 21 21:26 init_data.xml
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 21:26 EVNT.40024047._000021.pool.root.1
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:26 start_atlas.sh
[2024-06-22 02:03:34] drwxrwx--x 2 boinc boinc      4096 Jun 21 21:26 shared
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc    482486 Jun 21 21:26 input.tar.gz
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc         0 Jun 21 21:26 boinc_lockfile
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc      2493 Jun 21 21:26 pandaJob.out
[2024-06-22 02:03:34] -rw------- 1 boinc boinc       424 Jun 21 21:26 setup.sh.local
[2024-06-22 02:03:34] -rw------- 1 boinc boinc   1025648 Jun 21 21:26 agis_schedconf.cvmfs.json
[2024-06-22 02:03:34] -rw------- 1 boinc boinc   1321363 Jun 21 21:26 cric_ddmendpoints.json
[2024-06-22 02:03:34] drwx------ 4 boinc boinc      4096 Jun 21 21:26 pilot3
[2024-06-22 02:03:34] -rw------- 1 boinc boinc        95 Jun 22 02:02 pilot_heartbeat.json
[2024-06-22 02:03:34] -rw------- 1 boinc boinc 280729810 Jun 22 02:02 HITS.40024049._000217.pool.root.1
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc       532 Jun 22 02:02 boinc_task_state.xml
[2024-06-22 02:03:34] -rw------- 1 boinc boinc      1048 Jun 22 02:03 memory_monitor_summary.json
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc      8192 Jun 22 02:03 boinc_mmap_file
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc        28 Jun 22 02:03 wrapper_checkpoint.txt
[2024-06-22 02:03:34] -rw------- 1 boinc boinc         0 Jun 22 02:03 agis_ddmendpoints.agis.ALL.json
[2024-06-22 02:03:34] -rw------- 1 boinc boinc    367957 Jun 22 02:03 log.40024049._000217.job.log.tgz.1
[2024-06-22 02:03:34] -rw------- 1 boinc boinc      7757 Jun 22 02:03 heartbeat.json
[2024-06-22 02:03:34] -rw------- 1 boinc boinc      4479 Jun 22 02:03 pilotlog.txt
[2024-06-22 02:03:34] -rw------- 1 boinc boinc   1686277 Jun 22 02:03 log.40024049._000217.job.log.1
[2024-06-22 02:03:34] -rw------- 1 boinc boinc       357 Jun 22 02:03 output.list
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc       620 Jun 22 02:03 runtime_log
[2024-06-22 02:03:34] -rw------- 1 boinc boinc   2068480 Jun 22 02:03 result.tar.gz
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc     11410 Jun 22 02:03 runtime_log.err
[2024-06-22 02:03:34] -rw------- 1 boinc boinc       659 Jun 22 02:03 Mg3NDmmPVe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmVFXKDmAs8Wom.diag
[2024-06-22 02:03:34] -rw-r--r-- 1 boinc boinc     21294 Jun 22 02:03 stderr.txt
[2024-06-22 02:03:34] HITS file was successfully produced:
[2024-06-22 02:03:34] -rw------- 1 boinc boinc 280729810 Jun 22 02:02 shared/HITS.pool.root.1
[2024-06-22 02:03:34]  *** Contents of shared directory: ***
[2024-06-22 02:03:34] total 877752
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 21:26 ATLAS.root_0
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:26 start_atlas.sh
[2024-06-22 02:03:34] -rw-r--r-- 2 boinc boinc    482486 Jun 21 21:26 input.tar.gz
[2024-06-22 02:03:34] -rw------- 1 boinc boinc 280729810 Jun 22 02:02 HITS.pool.root.1
[2024-06-22 02:03:34] -rw------- 1 boinc boinc   2068480 Jun 22 02:03 result.tar.gz
02:03:36 (144981): run_atlas exited; CPU time 62399.593723
02:03:36 (144981): called boinc_finish(0)

</stderr_txt>
]]>

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