Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:26:22 (3113209): wrapper (7.7.26015): starting
12:26:22 (3113209): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 12:26:22] Arguments: --nthreads 4
[2024-06-21 12:26:22] Threads: 4
[2024-06-21 12:26:22] Checking for CVMFS
[2024-06-21 12:26:22] No cvmfs_config command found, will try listing directly
[2024-06-21 12:26:22] CVMFS is ok
[2024-06-21 12:26:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 12:26:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 12:26:22] Further information can be found at the LHC@home message board.
[2024-06-21 12:26:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 12:26:22] Checking for apptainer binary...
[2024-06-21 12:26:22] which: no apptainer in ((null))
[2024-06-21 12:26:22] apptainer is not installed, using version from CVMFS
[2024-06-21 12:26:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 12:26:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-06-21 12:26:23] apptainer works
[2024-06-21 12:26:24] Set ATHENA_PROC_NUMBER=4
[2024-06-21 12:26:24] Set ATHENA_CORE_NUMBER=4
[2024-06-21 12:26:24] Starting ATLAS job with PandaID=6238842780
[2024-06-21 12:26:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 16:53:05]  *** The last 200 lines of the pilot log: ***
[2024-06-21 16:53:05] 2024-06-21 14:52:50,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 16:53:05] 2024-06-21 14:52:50,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 16:53:05] 2024-06-21 14:52:50,080 | INFO     | fitting pss+swap vs Time
[2024-06-21 16:53:05] 2024-06-21 14:52:50,080 | INFO     | model: linear, x: [1718965634.0, 1718965695.0, 1718965756.0, 1718965817.0, 1718965878.0, 1718965939.0, 1718966000.0, 1718966061.0, 1718966122.0, 1718966183.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,080 | INFO     | sum of square deviations: 5576683165.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,082 | INFO     | sum of deviations: 87052891075.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,082 | INFO     | mean x: 1718973594.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,082 | INFO     | mean y: 2309712.6488549616
[2024-06-21 16:53:05] 2024-06-21 14:52:50,082 | INFO     | -- intersect: -26831135301.50644
[2024-06-21 16:53:05] 2024-06-21 14:52:50,083 | INFO     | intersect: -26831135301.50644
[2024-06-21 16:53:05] 2024-06-21 14:52:50,083 | INFO     | chi2: 4.207200653687004
[2024-06-21 16:53:05] 2024-06-21 14:52:50,083 | INFO     | model: linear, x: [1718965634.0, 1718965695.0, 1718965756.0, 1718965817.0, 1718965878.0, 1718965939.0, 1718966000.0, 1718966061.0, 1718966122.0, 1718966183.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,084 | INFO     | sum of square deviations: 5263458688.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,085 | INFO     | sum of deviations: 103674333700.99998
[2024-06-21 16:53:05] 2024-06-21 14:52:50,085 | INFO     | mean x: 1718973442.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | mean y: 2317665.011673152
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | -- intersect: -33856298278.03124
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | intersect: -33856298278.03124
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | chi2: 3.229192086796858
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | current chi2=3.229192086796858 (change=23.246064245427966 %)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,086 | INFO     | right removable region: 256
[2024-06-21 16:53:05] 2024-06-21 14:52:50,087 | INFO     | model: linear, x: [1718965939.0, 1718966000.0, 1718966061.0, 1718966122.0, 1718966183.0, 1718966244.0, 1718966305.0, 1718966366.0, 1718966427.0, 1718966488.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,087 | INFO     | sum of square deviations: 5263458688.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | sum of deviations: 30703620683.999996
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | mean x: 1718973747.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | mean y: 2337066.1712062256
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | -- intersect: -10025046261.44392
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | intersect: -10025046261.44392
[2024-06-21 16:53:05] 2024-06-21 14:52:50,089 | INFO     | chi2: 2.0844365888338845
[2024-06-21 16:53:05] 2024-06-21 14:52:50,090 | INFO     | current chi2=2.0844365888338845 (change=50.45549855086715 %)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,090 | INFO     | model: linear, x: [1718966244.0, 1718966305.0, 1718966366.0, 1718966427.0, 1718966488.0, 1718966549.0, 1718966610.0, 1718966671.0, 1718966732.0, 1718966793.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,090 | INFO     | sum of square deviations: 4962187923.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,092 | INFO     | sum of deviations: -10604870587.500002
[2024-06-21 16:53:05] 2024-06-21 14:52:50,092 | INFO     | mean x: 1718973899.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,092 | INFO     | mean y: 2357976.472222222
[2024-06-21 16:53:05] 2024-06-21 14:52:50,092 | INFO     | -- intersect: 3676039028.1295104
[2024-06-21 16:53:05] 2024-06-21 14:52:50,092 | INFO     | intersect: 3676039028.1295104
[2024-06-21 16:53:05] 2024-06-21 14:52:50,093 | INFO     | chi2: 1.0696885876390232
[2024-06-21 16:53:05] 2024-06-21 14:52:50,093 | INFO     | current chi2=1.0696885876390232 (change=48.68212382332778 %)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,093 | INFO     | model: linear, x: [1718966549.0, 1718966610.0, 1718966671.0, 1718966732.0, 1718966793.0, 1718966854.0, 1718966915.0, 1718966976.0, 1718967037.0, 1718967098.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,093 | INFO     | sum of square deviations: 4672638308.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,095 | INFO     | sum of deviations: -8756643452.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,095 | INFO     | mean x: 1718974052.0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,095 | INFO     | mean y: 2356956.6639676113
[2024-06-21 16:53:05] 2024-06-21 14:52:50,095 | INFO     | -- intersect: 3223758204.612583
[2024-06-21 16:53:05] 2024-06-21 14:52:50,095 | INFO     | intersect: 3223758204.612583
[2024-06-21 16:53:05] 2024-06-21 14:52:50,096 | INFO     | chi2: 1.0203813896240888
[2024-06-21 16:53:05] 2024-06-21 14:52:50,096 | INFO     | current chi2=1.0203813896240888 (change=4.609490891527921 %)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,096 | INFO     | left removable region: 30
[2024-06-21 16:53:05] 2024-06-21 14:52:50,096 | INFO     | model: linear, x: [1718967464.0, 1718967525.0, 1718967586.0, 1718967647.0, 1718967708.0, 1718967769.0, 1718967830.0, 1718967891.0, 1718967952.0, 1718968013.0, 1718
[2024-06-21 16:53:05] 2024-06-21 14:52:50,096 | INFO     | sum of square deviations: 3579276412.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,098 | INFO     | sum of deviations: 3825301368.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,098 | INFO     | mean x: 1718974326.5
[2024-06-21 16:53:05] 2024-06-21 14:52:50,098 | INFO     | mean y: 2369206.3053097343
[2024-06-21 16:53:05] 2024-06-21 14:52:50,098 | INFO     | -- intersect: -1834760449.4577086
[2024-06-21 16:53:05] 2024-06-21 14:52:50,098 | INFO     | intersect: -1834760449.4577086
[2024-06-21 16:53:05] 2024-06-21 14:52:50,099 | INFO     | chi2: 0.00043569835193131047
[2024-06-21 16:53:05] 2024-06-21 14:52:50,099 | INFO     | -- intersect: -1834760449.4577086
[2024-06-21 16:53:05] 2024-06-21 14:52:50,099 | INFO     | current memory leak: 1.07 B/s (using 226 data points, chi2=0.00)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,099 | INFO     | ..............................
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . Timing measurements:
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . get job = 0 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . initial setup = 1 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . payload setup = 6 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . stage-in = 0 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . payload execution = 15928 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . stage-out = 1 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | . log creation = 0 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,100 | INFO     | ..............................
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | 
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | job summary report
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | --------------------------------------------------
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | PanDA job id: 6238842780
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | task id: 40024049
[2024-06-21 16:53:05] 2024-06-21 14:52:50,197 | INFO     | errors: (none)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | pilot state: finished 
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | transexitcode: 0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | exeerrorcode: 0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | exeerrordiag: 
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | exitcode: 0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | exitmsg: OK
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | cpuconsumptiontime: 60658 s
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | nevents: 400
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | neventsw: 0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | pid: 3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | pgrp: 3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:50,198 | INFO     | corecount: 4
[2024-06-21 16:53:05] 2024-06-21 14:52:50,199 | INFO     | event service: False
[2024-06-21 16:53:05] 2024-06-21 14:52:50,199 | INFO     | sizes: {0: 2386858, 9: 2387064, 11: 2387092, 15938: 2418129, 15939: 2418128, 15941: 2427166, 15943: 2427350, 15950: 2427520}
[2024-06-21 16:53:05] 2024-06-21 14:52:50,199 | INFO     | --------------------------------------------------
[2024-06-21 16:53:05] 2024-06-21 14:52:50,199 | INFO     | 
[2024-06-21 16:53:05] 2024-06-21 14:52:50,199 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-21 16:53:05] 2024-06-21 14:52:50,230 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,230 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | job 6238842780 has completed (purged errors)
[2024-06-21 16:53:05] 2024-06-21 14:52:50,232 | INFO     | overall cleanup function is called
[2024-06-21 16:53:05] 2024-06-21 14:52:51,240 | INFO     | --- collectZombieJob: --- 10, [3124655]
[2024-06-21 16:53:05] 2024-06-21 14:52:51,240 | INFO     | zombie collector waiting for pid 3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:51,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 16:53:05] 2024-06-21 14:52:52,245 | INFO     | collected zombie processes
[2024-06-21 16:53:05] 2024-06-21 14:52:52,245 | INFO     | will now attempt to kill all subprocesses of pid=3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:52,440 | INFO     | process IDs to be killed: [3124655] (in reverse order)
[2024-06-21 16:53:05] 2024-06-21 14:52:52,576 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 16:53:05] 2024-06-21 14:52:52,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 16:53:05] 2024-06-21 14:52:52,588 | INFO     | did not find any defunct processes belonging to 3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:52,598 | INFO     | did not find any defunct processes belonging to 3124655
[2024-06-21 16:53:05] 2024-06-21 14:52:52,598 | INFO     | ready for new job
[2024-06-21 16:53:05] 2024-06-21 14:52:52,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 16:53:05] 2024-06-21 14:52:52,601 | INFO     | *************************************
[2024-06-21 16:53:05] 2024-06-21 14:52:52,601 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 16:53:05] 2024-06-21 14:52:52,601 | INFO     | *************************************
[2024-06-21 16:53:05] 2024-06-21 14:52:52,601 | INFO     | 
[2024-06-21 16:53:05] 2024-06-21 14:52:52,605 | INFO     | architecture information:
[2024-06-21 16:53:05] 2024-06-21 14:52:52,605 | INFO     | executing command: cat /etc/os-release
[2024-06-21 16:53:05] 2024-06-21 14:52:52,626 | INFO     | cat /etc/os-release:
[2024-06-21 16:53:05] NAME="CentOS Linux"
[2024-06-21 16:53:05] VERSION="7 (Core)"
[2024-06-21 16:53:05] ID="centos"
[2024-06-21 16:53:05] ID_LIKE="rhel fedora"
[2024-06-21 16:53:05] VERSION_ID="7"
[2024-06-21 16:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 16:53:05] ANSI_COLOR="0;31"
[2024-06-21 16:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 16:53:05] HOME_URL="https://www.centos.org/"
[2024-06-21 16:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 16:53:05] 
[2024-06-21 16:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 16:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 16:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 16:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 16:53:05] 
[2024-06-21 16:53:05] 2024-06-21 14:52:52,627 | INFO     | *************************************
[2024-06-21 16:53:05] 2024-06-21 14:52:53,129 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-21 16:53:05] 2024-06-21 14:52:53,153 | INFO     | sufficient remaining disk space (654852489216 B)
[2024-06-21 16:53:05] 2024-06-21 14:52:53,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 16:53:05] 2024-06-21 14:52:53,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 16:53:05] 2024-06-21 14:52:53,154 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 16:53:05] 2024-06-21 14:52:53,155 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 16:53:05] 2024-06-21 14:52:53,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 16:53:05] 2024-06-21 14:52:53,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 16:53:05] 2024-06-21 14:52:53,990 | INFO     | all data control threads have been joined
[2024-06-21 16:53:05] 2024-06-21 14:52:54,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:53:05] 2024-06-21 14:52:54,031 | INFO     | aborting loop
[2024-06-21 16:53:05] 2024-06-21 14:52:54,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 16:53:05] 2024-06-21 14:52:54,159 | INFO     | [job] retrieve thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:54,221 | INFO     | [payload] validate_post thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:54,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 16:53:05] 2024-06-21 14:52:54,297 | INFO     | all payload control threads have been joined
[2024-06-21 16:53:05] 2024-06-21 14:52:54,494 | INFO     | [job] validate thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:54,720 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:54,749 | INFO     | all job control threads have been joined
[2024-06-21 16:53:05] 2024-06-21 14:52:54,832 | INFO     | [payload] failed_post thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:54,995 | INFO     | [data] control thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,036 | INFO     | [job] job monitor thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 16:53:05] 2024-06-21 14:52:55,302 | INFO     | [payload] control thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,327 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,388 | INFO     | [data] copytool_in thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,405 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,415 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:55,754 | INFO     | [job] control thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:56,212 | INFO     | [job] queue monitor thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:56,298 | INFO     | [data] copytool_out thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:58,068 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 16:53:05] 2024-06-21 14:52:59,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47162817061952)>', '<ExcThread(monitor, started 47163005740800)>']
[2024-06-21 16:53:05] 2024-06-21 14:53:00,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 16:53:05] 2024-06-21 14:53:00,190 | INFO     | [monitor] control thread has ended
[2024-06-21 16:53:05] 2024-06-21 14:53:04,909 | INFO     | all workflow threads have been joined
[2024-06-21 16:53:05] 2024-06-21 14:53:04,909 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 16:53:05] 2024-06-21 14:53:04,909 | INFO     | traces error code: 0
[2024-06-21 16:53:05] 2024-06-21 14:53:04,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 16:53:05] 2024-06-21 14:53:05,043 [wrapper] ==== pilot stdout END ====
[2024-06-21 16:53:05] 2024-06-21 14:53:05,045 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 16:53:05] 2024-06-21 14:53:05,048 [wrapper] pilotpid: 3117598
[2024-06-21 16:53:05] 2024-06-21 14:53:05,050 [wrapper] Pilot exit status: 0
[2024-06-21 16:53:05] 2024-06-21 14:53:05,082 [wrapper] pandaids: 6238842780
[2024-06-21 16:53:05] 2024-06-21 14:53:05,168 [wrapper] cleanup supervisor_pilot 3689771 3117599
[2024-06-21 16:53:05] 2024-06-21 14:53:05,170 [wrapper] Test setup, not cleaning
[2024-06-21 16:53:05] 2024-06-21 14:53:05,180 [wrapper] ==== wrapper stdout END ====
[2024-06-21 16:53:05] 2024-06-21 14:53:05,185 [wrapper] ==== wrapper stderr END ====
[2024-06-21 16:53:05] 2024-06-21 14:53:05,189 [wrapper] apfmon messages muted
[2024-06-21 16:53:05]  *** Error codes and diagnostics ***
[2024-06-21 16:53:05]     "exeErrorCode": 0,
[2024-06-21 16:53:05]     "exeErrorDiag": "",
[2024-06-21 16:53:05]     "pilotErrorCode": 0,
[2024-06-21 16:53:05]     "pilotErrorDiag": "",
[2024-06-21 16:53:05]  *** Listing of results directory ***
[2024-06-21 16:53:05] total 877332
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:33 pilot3.tar.gz
[2024-06-21 16:53:05] -rwx------ 1 boinc boinc     32308 Jun 20 13:44 runpilot2-wrapper.sh
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:44 queuedata.json
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc       100 Jun 21 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 16:53:05] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 12:26 run_atlas
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc       105 Jun 21 12:26 job.xml
[2024-06-21 16:53:05] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 12:26 EVNT.40024047._000021.pool.root.1
[2024-06-21 16:53:05] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:26 start_atlas.sh
[2024-06-21 16:53:05] drwxrwx--x 2 boinc boinc      4096 Jun 21 12:26 shared
[2024-06-21 16:53:05] -rw-r--r-- 2 boinc boinc    482473 Jun 21 12:26 input.tar.gz
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc      6661 Jun 21 12:26 init_data.xml
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc         0 Jun 21 12:26 boinc_lockfile
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc      2493 Jun 21 12:26 pandaJob.out
[2024-06-21 16:53:05] -rw------- 1 boinc boinc       424 Jun 21 12:26 setup.sh.local
[2024-06-21 16:53:05] -rw------- 1 boinc boinc   1023819 Jun 21 12:26 agis_schedconf.cvmfs.json
[2024-06-21 16:53:05] -rw------- 1 boinc boinc   1321251 Jun 21 12:26 cric_ddmendpoints.json
[2024-06-21 16:53:05] drwx------ 4 boinc boinc      4096 Jun 21 12:26 pilot3
[2024-06-21 16:53:05] -rw------- 1 boinc boinc 275249064 Jun 21 16:52 HITS.40024049._000214.pool.root.1
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc       531 Jun 21 16:52 boinc_task_state.xml
[2024-06-21 16:53:05] -rw------- 1 boinc boinc        95 Jun 21 16:52 pilot_heartbeat.json
[2024-06-21 16:53:05] -rw------- 1 boinc boinc      1048 Jun 21 16:52 memory_monitor_summary.json
[2024-06-21 16:53:05] -rw------- 1 boinc boinc         0 Jun 21 16:52 agis_ddmendpoints.agis.ALL.json
[2024-06-21 16:53:05] -rw------- 1 boinc boinc    360832 Jun 21 16:52 log.40024049._000214.job.log.tgz.1
[2024-06-21 16:53:05] -rw------- 1 boinc boinc      7757 Jun 21 16:52 heartbeat.json
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc      8192 Jun 21 16:53 boinc_mmap_file
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc        28 Jun 21 16:53 wrapper_checkpoint.txt
[2024-06-21 16:53:05] -rw------- 1 boinc boinc      4344 Jun 21 16:53 pilotlog.txt
[2024-06-21 16:53:05] -rw------- 1 boinc boinc   1689252 Jun 21 16:53 log.40024049._000214.job.log.1
[2024-06-21 16:53:05] -rw------- 1 boinc boinc       357 Jun 21 16:53 output.list
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc       620 Jun 21 16:53 runtime_log
[2024-06-21 16:53:05] -rw------- 1 boinc boinc   2068480 Jun 21 16:53 result.tar.gz
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc     11410 Jun 21 16:53 runtime_log.err
[2024-06-21 16:53:05] -rw------- 1 boinc boinc       659 Jun 21 16:53 oijKDmmOVe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmelqKDmLVvZqm.diag
[2024-06-21 16:53:05] -rw-r--r-- 1 boinc boinc     21336 Jun 21 16:53 stderr.txt
[2024-06-21 16:53:06] HITS file was successfully produced:
[2024-06-21 16:53:06] -rw------- 1 boinc boinc 275249064 Jun 21 16:52 shared/HITS.pool.root.1
[2024-06-21 16:53:06]  *** Contents of shared directory: ***
[2024-06-21 16:53:06] total 872400
[2024-06-21 16:53:06] -rw-r--r-- 2 boinc boinc 615502382 Jun 21 12:26 ATLAS.root_0
[2024-06-21 16:53:06] -rw-r--r-- 2 boinc boinc     17537 Jun 21 12:26 start_atlas.sh
[2024-06-21 16:53:06] -rw-r--r-- 2 boinc boinc    482473 Jun 21 12:26 input.tar.gz
[2024-06-21 16:53:06] -rw------- 1 boinc boinc 275249064 Jun 21 16:52 HITS.pool.root.1
[2024-06-21 16:53:06] -rw------- 1 boinc boinc   2068480 Jun 21 16:53 result.tar.gz
16:53:07 (3113209): run_atlas exited; CPU time 60370.515452
16:53:07 (3113209): called boinc_finish(0)

</stderr_txt>
]]>

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