Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:41:07 (1343396): wrapper (7.7.26015): starting
06:41:07 (1343396): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 06:41:07] Arguments: --nthreads 4
[2024-06-22 06:41:07] Threads: 4
[2024-06-22 06:41:07] Checking for CVMFS
[2024-06-22 06:41:07] No cvmfs_config command found, will try listing directly
[2024-06-22 06:41:07] CVMFS is ok
[2024-06-22 06:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 06:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 06:41:07] Further information can be found at the LHC@home message board.
[2024-06-22 06:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 06:41:07] Checking for apptainer binary...
[2024-06-22 06:41:07] which: no apptainer in ((null))
[2024-06-22 06:41:07] apptainer is not installed, using version from CVMFS
[2024-06-22 06:41:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 06:41:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-06-22 06:41:08] apptainer works
[2024-06-22 06:41:08] Set ATHENA_PROC_NUMBER=4
[2024-06-22 06:41:08] Set ATHENA_CORE_NUMBER=4
[2024-06-22 06:41:08] Starting ATLAS job with PandaID=6238842704
[2024-06-22 06:41:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 11:22:18]  *** The last 200 lines of the pilot log: ***
[2024-06-22 11:22:18] 2024-06-22 09:22:01,811 | INFO     | fitting pss+swap vs Time
[2024-06-22 11:22:18] 2024-06-22 09:22:01,811 | INFO     | model: linear, x: [1719031320.0, 1719031381.0, 1719031442.0, 1719031503.0, 1719031564.0, 1719031625.0, 1719031686.0, 1719031747.0, 1719031808.0, 1719031869.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,811 | INFO     | sum of square deviations: 6519285025.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,814 | INFO     | sum of deviations: 113333330389.00002
[2024-06-22 11:22:18] 2024-06-22 09:22:01,814 | INFO     | mean x: 1719039707.5
[2024-06-22 11:22:18] 2024-06-22 09:22:01,814 | INFO     | mean y: 2317188.5144927534
[2024-06-22 11:22:18] 2024-06-22 09:22:01,814 | INFO     | -- intersect: -29882017424.06942
[2024-06-22 11:22:18] 2024-06-22 09:22:01,814 | INFO     | intersect: -29882017424.06942
[2024-06-22 11:22:18] 2024-06-22 09:22:01,815 | INFO     | chi2: 4.567026669221433
[2024-06-22 11:22:18] 2024-06-22 09:22:01,815 | INFO     | model: linear, x: [1719031320.0, 1719031381.0, 1719031442.0, 1719031503.0, 1719031564.0, 1719031625.0, 1719031686.0, 1719031747.0, 1719031808.0, 1719031869.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,816 | INFO     | sum of square deviations: 6171352920.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,818 | INFO     | sum of deviations: 128071108082.00002
[2024-06-22 11:22:18] 2024-06-22 09:22:01,818 | INFO     | mean x: 1719039555.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,818 | INFO     | mean y: 2323536.996309963
[2024-06-22 11:22:18] 2024-06-22 09:22:01,818 | INFO     | -- intersect: -35672074524.432045
[2024-06-22 11:22:18] 2024-06-22 09:22:01,818 | INFO     | intersect: -35672074524.432045
[2024-06-22 11:22:18] 2024-06-22 09:22:01,819 | INFO     | chi2: 3.8221970799662532
[2024-06-22 11:22:18] 2024-06-22 09:22:01,819 | INFO     | current chi2=3.8221970799662532 (change=16.308851320593565 %)
[2024-06-22 11:22:18] 2024-06-22 09:22:01,821 | INFO     | right removable region: 270
[2024-06-22 11:22:18] 2024-06-22 09:22:01,821 | INFO     | model: linear, x: [1719031625.0, 1719031686.0, 1719031747.0, 1719031808.0, 1719031869.0, 1719031930.0, 1719031991.0, 1719032052.0, 1719032113.0, 1719032174.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,821 | INFO     | sum of square deviations: 6171352920.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | sum of deviations: 49208523343.99999
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | mean x: 1719039860.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | mean y: 2345229.8745387453
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | -- intersect: -13704764730.720047
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | intersect: -13704764730.720047
[2024-06-22 11:22:18] 2024-06-22 09:22:01,824 | INFO     | chi2: 2.1604521718495295
[2024-06-22 11:22:18] 2024-06-22 09:22:01,825 | INFO     | current chi2=2.1604521718495295 (change=52.694557568286896 %)
[2024-06-22 11:22:18] 2024-06-22 09:22:01,825 | INFO     | model: linear, x: [1719031930.0, 1719031991.0, 1719032052.0, 1719032113.0, 1719032174.0, 1719032235.0, 1719032296.0, 1719032357.0, 1719032418.0, 1719032479.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,825 | INFO     | sum of square deviations: 5836025702.5
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | sum of deviations: -642981022.4999981
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | mean x: 1719040012.5
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | mean y: 2367902.1090225563
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | -- intersect: 191762219.62927845
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | intersect: 191762219.62927845
[2024-06-22 11:22:18] 2024-06-22 09:22:01,828 | INFO     | chi2: 0.8383704255458114
[2024-06-22 11:22:18] 2024-06-22 09:22:01,829 | INFO     | current chi2=0.8383704255458114 (change=61.19467783320122 %)
[2024-06-22 11:22:18] 2024-06-22 09:22:01,829 | INFO     | model: linear, x: [1719032235.0, 1719032296.0, 1719032357.0, 1719032418.0, 1719032479.0, 1719032540.0, 1719032601.0, 1719032662.0, 1719032723.0, 1719032784.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,829 | INFO     | sum of square deviations: 5513070810.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,831 | INFO     | sum of deviations: -7937298162.000002
[2024-06-22 11:22:18] 2024-06-22 09:22:01,831 | INFO     | mean x: 1719040165.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | mean y: 2371310.2988505745
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | -- intersect: 2477314007.807697
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | intersect: 2477314007.807697
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | chi2: 0.7785900399263586
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | current chi2=0.7785900399263586 (change=7.130545615386365 %)
[2024-06-22 11:22:18] 2024-06-22 09:22:01,832 | INFO     | left removable region: 30
[2024-06-22 11:22:18] 2024-06-22 09:22:01,833 | INFO     | model: linear, x: [1719033150.0, 1719033211.0, 1719033272.0, 1719033333.0, 1719033394.0, 1719033455.0, 1719033516.0, 1719033577.0, 1719033638.0, 1719033699.0, 1719
[2024-06-22 11:22:18] 2024-06-22 09:22:01,833 | INFO     | sum of square deviations: 4286517580.0
[2024-06-22 11:22:18] 2024-06-22 09:22:01,835 | INFO     | sum of deviations: 10033926020.500002
[2024-06-22 11:22:18] 2024-06-22 09:22:01,835 | INFO     | mean x: 1719040439.5
[2024-06-22 11:22:18] 2024-06-22 09:22:01,835 | INFO     | mean y: 2377999.529166667
[2024-06-22 11:22:18] 2024-06-22 09:22:01,835 | INFO     | -- intersect: -4021570176.1810584
[2024-06-22 11:22:18] 2024-06-22 09:22:01,835 | INFO     | intersect: -4021570176.1810584
[2024-06-22 11:22:18] 2024-06-22 09:22:01,836 | INFO     | chi2: 0.0023358033195676536
[2024-06-22 11:22:18] 2024-06-22 09:22:01,836 | INFO     | -- intersect: -4021570176.1810584
[2024-06-22 11:22:18] 2024-06-22 09:22:01,836 | INFO     | current memory leak: 2.34 B/s (using 240 data points, chi2=0.00)
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | ..............................
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . Timing measurements:
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . get job = 0 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . initial setup = 1 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . payload setup = 10 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . stage-in = 0 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,837 | INFO     | . payload execution = 16799 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,838 | INFO     | . stage-out = 1 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,838 | INFO     | . log creation = 0 s
[2024-06-22 11:22:18] 2024-06-22 09:22:01,838 | INFO     | ..............................
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | 
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | job summary report
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | --------------------------------------------------
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | PanDA job id: 6238842704
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | task id: 40024049
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | errors: (none)
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 11:22:18] 2024-06-22 09:22:02,307 | INFO     | pilot state: finished 
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | transexitcode: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | exeerrorcode: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | exeerrordiag: 
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | exitcode: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | exitmsg: OK
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | cpuconsumptiontime: 63947 s
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | nevents: 400
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | neventsw: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | pid: 1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | pgrp: 1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | corecount: 4
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | event service: False
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | sizes: {0: 2386657, 1: 2386856, 6: 2387062, 11: 2387090, 16813: 2418690, 16815: 2427672, 16816: 2427856, 16821: 2428026}
[2024-06-22 11:22:18] 2024-06-22 09:22:02,308 | INFO     | --------------------------------------------------
[2024-06-22 11:22:18] 2024-06-22 09:22:02,309 | INFO     | 
[2024-06-22 11:22:18] 2024-06-22 09:22:02,309 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/1
[2024-06-22 11:22:18] 2024-06-22 09:22:02,336 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,336 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,336 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,336 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | job 6238842704 has completed (purged errors)
[2024-06-22 11:22:18] 2024-06-22 09:22:02,338 | INFO     | overall cleanup function is called
[2024-06-22 11:22:18] 2024-06-22 09:22:03,346 | INFO     | --- collectZombieJob: --- 10, [1355390]
[2024-06-22 11:22:18] 2024-06-22 09:22:03,346 | INFO     | zombie collector waiting for pid 1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:03,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 11:22:18] 2024-06-22 09:22:04,351 | INFO     | collected zombie processes
[2024-06-22 11:22:18] 2024-06-22 09:22:04,351 | INFO     | will now attempt to kill all subprocesses of pid=1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:04,519 | INFO     | process IDs to be killed: [1355390] (in reverse order)
[2024-06-22 11:22:18] 2024-06-22 09:22:04,642 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 11:22:18] 2024-06-22 09:22:04,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 11:22:18] 2024-06-22 09:22:04,652 | INFO     | did not find any defunct processes belonging to 1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:04,660 | INFO     | did not find any defunct processes belonging to 1355390
[2024-06-22 11:22:18] 2024-06-22 09:22:04,661 | INFO     | ready for new job
[2024-06-22 11:22:18] 2024-06-22 09:22:04,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 11:22:18] 2024-06-22 09:22:04,663 | INFO     | *************************************
[2024-06-22 11:22:18] 2024-06-22 09:22:04,663 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 11:22:18] 2024-06-22 09:22:04,663 | INFO     | *************************************
[2024-06-22 11:22:18] 2024-06-22 09:22:04,663 | INFO     | 
[2024-06-22 11:22:18] 2024-06-22 09:22:04,667 | INFO     | architecture information:
[2024-06-22 11:22:18] 2024-06-22 09:22:04,668 | INFO     | executing command: cat /etc/os-release
[2024-06-22 11:22:18] 2024-06-22 09:22:04,688 | INFO     | cat /etc/os-release:
[2024-06-22 11:22:18] NAME="CentOS Linux"
[2024-06-22 11:22:18] VERSION="7 (Core)"
[2024-06-22 11:22:18] ID="centos"
[2024-06-22 11:22:18] ID_LIKE="rhel fedora"
[2024-06-22 11:22:18] VERSION_ID="7"
[2024-06-22 11:22:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 11:22:18] ANSI_COLOR="0;31"
[2024-06-22 11:22:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 11:22:18] HOME_URL="https://www.centos.org/"
[2024-06-22 11:22:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 11:22:18] 
[2024-06-22 11:22:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 11:22:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 11:22:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 11:22:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 11:22:18] 
[2024-06-22 11:22:18] 2024-06-22 09:22:04,689 | INFO     | *************************************
[2024-06-22 11:22:18] 2024-06-22 09:22:05,191 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/1
[2024-06-22 11:22:18] 2024-06-22 09:22:05,215 | INFO     | sufficient remaining disk space (660512702464 B)
[2024-06-22 11:22:18] 2024-06-22 09:22:05,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 11:22:18] 2024-06-22 09:22:05,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 11:22:18] 2024-06-22 09:22:05,216 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 11:22:18] 2024-06-22 09:22:05,217 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 11:22:18] 2024-06-22 09:22:05,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 11:22:18] 2024-06-22 09:22:05,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 11:22:18] 2024-06-22 09:22:05,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 11:22:18] 2024-06-22 09:22:05,443 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 11:22:18] 2024-06-22 09:22:05,443 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 11:22:18] 2024-06-22 09:22:05,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 11:22:18] 2024-06-22 09:22:05,443 | INFO     | will abort loop
[2024-06-22 11:22:18] 2024-06-22 09:22:05,498 | INFO     | all data control threads have been joined
[2024-06-22 11:22:18] 2024-06-22 09:22:06,152 | INFO     | all payload control threads have been joined
[2024-06-22 11:22:18] 2024-06-22 09:22:06,153 | INFO     | all job control threads have been joined
[2024-06-22 11:22:18] 2024-06-22 09:22:06,221 | INFO     | [job] retrieve thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,303 | INFO     | [payload] failed_post thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,326 | INFO     | [data] copytool_in thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,369 | INFO     | [payload] validate_post thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,448 | INFO     | [job] job monitor thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,501 | INFO     | [data] control thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:06,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 11:22:18] 2024-06-22 09:22:07,061 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,157 | INFO     | [payload] control thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,158 | INFO     | [job] control thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,222 | INFO     | [data] copytool_out thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,331 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 11:22:18] 2024-06-22 09:22:07,587 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,629 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,686 | INFO     | [job] validate thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:07,928 | INFO     | [job] queue monitor thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:11,456 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 11:22:18] 2024-06-22 09:22:12,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47235573552192)>', '<ExcThread(monitor, started 47235755927296)>']
[2024-06-22 11:22:18] 2024-06-22 09:22:13,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 11:22:18] 2024-06-22 09:22:13,257 | INFO     | [monitor] control thread has ended
[2024-06-22 11:22:18] 2024-06-22 09:22:17,347 | INFO     | all workflow threads have been joined
[2024-06-22 11:22:18] 2024-06-22 09:22:17,347 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 11:22:18] 2024-06-22 09:22:17,347 | INFO     | traces error code: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:17,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 11:22:18] 2024-06-22 09:22:17,467 [wrapper] ==== pilot stdout END ====
[2024-06-22 11:22:18] 2024-06-22 09:22:17,470 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 11:22:18] 2024-06-22 09:22:17,473 [wrapper] pilotpid: 1347871
[2024-06-22 11:22:18] 2024-06-22 09:22:17,476 [wrapper] Pilot exit status: 0
[2024-06-22 11:22:18] 2024-06-22 09:22:17,493 [wrapper] pandaids: 6238842704
[2024-06-22 11:22:18] 2024-06-22 09:22:17,580 [wrapper] cleanup supervisor_pilot 1987786 1347872
[2024-06-22 11:22:18] 2024-06-22 09:22:17,583 [wrapper] Test setup, not cleaning
[2024-06-22 11:22:18] 2024-06-22 09:22:17,585 [wrapper] ==== wrapper stdout END ====
[2024-06-22 11:22:18] 2024-06-22 09:22:17,587 [wrapper] ==== wrapper stderr END ====
[2024-06-22 11:22:18] 2024-06-22 09:22:17,592 [wrapper] apfmon messages muted
[2024-06-22 11:22:18]  *** Error codes and diagnostics ***
[2024-06-22 11:22:18]     "exeErrorCode": 0,
[2024-06-22 11:22:18]     "exeErrorDiag": "",
[2024-06-22 11:22:18]     "pilotErrorCode": 0,
[2024-06-22 11:22:18]     "pilotErrorDiag": "",
[2024-06-22 11:22:18]  *** Listing of results directory ***
[2024-06-22 11:22:18] total 874172
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:24 pilot3.tar.gz
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:27 queuedata.json
[2024-06-22 11:22:18] -rwx------ 1 boinc boinc     32308 Jun 20 13:27 runpilot2-wrapper.sh
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc       100 Jun 22 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 11:22:18] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 06:41 run_atlas
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc       105 Jun 22 06:41 job.xml
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc      6661 Jun 22 06:41 init_data.xml
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc 610598638 Jun 22 06:41 EVNT.40024047._000009.pool.root.1
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc     17537 Jun 22 06:41 start_atlas.sh
[2024-06-22 11:22:18] drwxrwx--x 2 boinc boinc      4096 Jun 22 06:41 shared
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc    482480 Jun 22 06:41 input.tar.gz
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc         0 Jun 22 06:41 boinc_lockfile
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc      2493 Jun 22 06:41 pandaJob.out
[2024-06-22 11:22:18] -rw------- 1 boinc boinc       424 Jun 22 06:41 setup.sh.local
[2024-06-22 11:22:18] -rw------- 1 boinc boinc   1025953 Jun 22 06:41 agis_schedconf.cvmfs.json
[2024-06-22 11:22:18] -rw------- 1 boinc boinc   1321363 Jun 22 06:41 cric_ddmendpoints.json
[2024-06-22 11:22:18] drwx------ 4 boinc boinc      4096 Jun 22 06:41 pilot3
[2024-06-22 11:22:18] -rw------- 1 boinc boinc 276837668 Jun 22 11:21 HITS.40024049._000138.pool.root.1
[2024-06-22 11:22:18] -rw------- 1 boinc boinc        95 Jun 22 11:21 pilot_heartbeat.json
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc       532 Jun 22 11:21 boinc_task_state.xml
[2024-06-22 11:22:18] -rw------- 1 boinc boinc      1047 Jun 22 11:21 memory_monitor_summary.json
[2024-06-22 11:22:18] -rw------- 1 boinc boinc         0 Jun 22 11:21 agis_ddmendpoints.agis.ALL.json
[2024-06-22 11:22:18] -rw------- 1 boinc boinc    367903 Jun 22 11:21 log.40024049._000138.job.log.tgz.1
[2024-06-22 11:22:18] -rw------- 1 boinc boinc      7757 Jun 22 11:22 heartbeat.json
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc      8192 Jun 22 11:22 boinc_mmap_file
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc        28 Jun 22 11:22 wrapper_checkpoint.txt
[2024-06-22 11:22:18] -rw------- 1 boinc boinc      4530 Jun 22 11:22 pilotlog.txt
[2024-06-22 11:22:18] -rw------- 1 boinc boinc   1722020 Jun 22 11:22 log.40024049._000138.job.log.1
[2024-06-22 11:22:18] -rw------- 1 boinc boinc       357 Jun 22 11:22 output.list
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc       620 Jun 22 11:22 runtime_log
[2024-06-22 11:22:18] -rw------- 1 boinc boinc   2109440 Jun 22 11:22 result.tar.gz
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc     11410 Jun 22 11:22 runtime_log.err
[2024-06-22 11:22:18] -rw------- 1 boinc boinc       658 Jun 22 11:22 eYQKDm07Ue5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm0EXKDm5Je9Bo.diag
[2024-06-22 11:22:18] -rw-r--r-- 1 boinc boinc     21381 Jun 22 11:22 stderr.txt
[2024-06-22 11:22:18] HITS file was successfully produced:
[2024-06-22 11:22:18] -rw------- 1 boinc boinc 276837668 Jun 22 11:21 shared/HITS.pool.root.1
[2024-06-22 11:22:18]  *** Contents of shared directory: ***
[2024-06-22 11:22:18] total 869200
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc 610598638 Jun 22 06:41 ATLAS.root_0
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc     17537 Jun 22 06:41 start_atlas.sh
[2024-06-22 11:22:18] -rw-r--r-- 2 boinc boinc    482480 Jun 22 06:41 input.tar.gz
[2024-06-22 11:22:18] -rw------- 1 boinc boinc 276837668 Jun 22 11:21 HITS.pool.root.1
[2024-06-22 11:22:18] -rw------- 1 boinc boinc   2109440 Jun 22 11:22 result.tar.gz
11:22:19 (1343396): run_atlas exited; CPU time 63652.762758
11:22:19 (1343396): called boinc_finish(0)

</stderr_txt>
]]>

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