Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:03 (2315602): wrapper (7.7.26015): starting
07:46:03 (2315602): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 07:46:03] Arguments: --nthreads 4
[2024-06-21 07:46:03] Threads: 4
[2024-06-21 07:46:03] Checking for CVMFS
[2024-06-21 07:46:03] No cvmfs_config command found, will try listing directly
[2024-06-21 07:46:03] CVMFS is ok
[2024-06-21 07:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 07:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 07:46:03] Further information can be found at the LHC@home message board.
[2024-06-21 07:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 07:46:03] Checking for apptainer binary...
[2024-06-21 07:46:03] which: no apptainer in ((null))
[2024-06-21 07:46:03] apptainer is not installed, using version from CVMFS
[2024-06-21 07:46:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 07:46:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-21 07:46:04] apptainer works
[2024-06-21 07:46:04] Set ATHENA_PROC_NUMBER=4
[2024-06-21 07:46:04] Set ATHENA_CORE_NUMBER=4
[2024-06-21 07:46:05] Starting ATLAS job with PandaID=6238842686
[2024-06-21 07:46:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 12:21:40]  *** The last 200 lines of the pilot log: ***
[2024-06-21 12:21:40] 2024-06-21 10:21:23,686 | INFO     | -- intersect: -20824153250.655087
[2024-06-21 12:21:40] 2024-06-21 10:21:23,686 | INFO     | intersect: -20824153250.655087
[2024-06-21 12:21:40] 2024-06-21 10:21:23,686 | INFO     | chi2: 1.5029206135717976
[2024-06-21 12:21:40] 2024-06-21 10:21:23,686 | INFO     | current chi2=1.5029206135717976 (change=62.54519526509448 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,687 | INFO     | model: linear, x: [1718949428.0, 1718949489.0, 1718949550.0, 1718949611.0, 1718949672.0, 1718949733.0, 1718949794.0, 1718949855.0, 1718949916.0, 1718949977.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,687 | INFO     | sum of square deviations: 5449944045.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | sum of deviations: 19133751294.000004
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | mean x: 1718957327.5
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | mean y: 2368881.9846153846
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | -- intersect: -6032574177.579204
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | intersect: -6032574177.579204
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | chi2: 0.06658692023103509
[2024-06-21 12:21:40] 2024-06-21 10:21:23,689 | INFO     | current chi2=0.06658692023103509 (change=95.56949850645893 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,690 | INFO     | model: linear, x: [1718949733.0, 1718949794.0, 1718949855.0, 1718949916.0, 1718949977.0, 1718950038.0, 1718950099.0, 1718950160.0, 1718950221.0, 1718950282.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,690 | INFO     | sum of square deviations: 5141528960.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | sum of deviations: 11799538476.999998
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | mean x: 1718957480.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | mean y: 2372469.843137255
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | -- intersect: -3942544515.6262894
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | intersect: -3942544515.6262894
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | chi2: 0.0028095690582483905
[2024-06-21 12:21:40] 2024-06-21 10:21:23,692 | INFO     | current chi2=0.0028095690582483905 (change=95.78059917998897 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,693 | INFO     | model: linear, x: [1718950038.0, 1718950099.0, 1718950160.0, 1718950221.0, 1718950282.0, 1718950343.0, 1718950404.0, 1718950465.0, 1718950526.0, 1718950587.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,693 | INFO     | sum of square deviations: 4844974562.5
[2024-06-21 12:21:40] 2024-06-21 10:21:23,694 | INFO     | sum of deviations: 12370231235.999998
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | mean x: 1718957632.5
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | mean y: 2372174.848
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | -- intersect: -4386485418.645735
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | intersect: -4386485418.645735
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | chi2: 0.0017529570666245278
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | current chi2=0.0017529570666245278 (change=37.60761774201063 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,695 | INFO     | model: linear, x: [1718950343.0, 1718950404.0, 1718950465.0, 1718950526.0, 1718950587.0, 1718950648.0, 1718950709.0, 1718950770.0, 1718950831.0, 1718950892.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,696 | INFO     | sum of square deviations: 4560048290.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,697 | INFO     | sum of deviations: 11247772310.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,697 | INFO     | mean x: 1718957785.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,697 | INFO     | mean y: 2372780.0408163266
[2024-06-21 12:21:40] 2024-06-21 10:21:23,697 | INFO     | -- intersect: -4237592357.73669
[2024-06-21 12:21:40] 2024-06-21 10:21:23,698 | INFO     | intersect: -4237592357.73669
[2024-06-21 12:21:40] 2024-06-21 10:21:23,698 | INFO     | chi2: 0.0009489661912805555
[2024-06-21 12:21:40] 2024-06-21 10:21:23,698 | INFO     | current chi2=0.0009489661912805555 (change=45.864835520023725 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,698 | INFO     | model: linear, x: [1718950648.0, 1718950709.0, 1718950770.0, 1718950831.0, 1718950892.0, 1718950953.0, 1718951014.0, 1718951075.0, 1718951136.0, 1718951197.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,698 | INFO     | sum of square deviations: 4286517580.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,700 | INFO     | sum of deviations: 10039432673.499998
[2024-06-21 12:21:40] 2024-06-21 10:21:23,700 | INFO     | mean x: 1718957937.5
[2024-06-21 12:21:40] 2024-06-21 10:21:23,700 | INFO     | mean y: 2373452.9291666667
[2024-06-21 12:21:40] 2024-06-21 10:21:23,700 | INFO     | -- intersect: -4023589851.789081
[2024-06-21 12:21:40] 2024-06-21 10:21:23,700 | INFO     | intersect: -4023589851.789081
[2024-06-21 12:21:40] 2024-06-21 10:21:23,701 | INFO     | chi2: 0.000728166759256521
[2024-06-21 12:21:40] 2024-06-21 10:21:23,701 | INFO     | current chi2=0.000728166759256521 (change=23.26736548180742 %)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,701 | INFO     | left removable region: 60
[2024-06-21 12:21:40] 2024-06-21 10:21:23,701 | INFO     | model: linear, x: [1718952478.0, 1718952539.0, 1718952600.0, 1718952661.0, 1718952722.0, 1718952783.0, 1718952844.0, 1718952905.0, 1718952966.0, 1718953027.0, 1718
[2024-06-21 12:21:40] 2024-06-21 10:21:23,701 | INFO     | sum of square deviations: 2632440055.0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,702 | INFO     | sum of deviations: 5062652300.000001
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | mean x: 1718958669.5
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | mean y: 2376195.5490196077
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | -- intersect: -3303488279.966688
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | intersect: -3303488279.966688
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | chi2: 0.0003364623591775522
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | -- intersect: -3303488279.966688
[2024-06-21 12:21:40] 2024-06-21 10:21:23,703 | INFO     | current memory leak: 1.92 B/s (using 204 data points, chi2=0.00)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | ..............................
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . Timing measurements:
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . get job = 0 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . initial setup = 1 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . payload setup = 10 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . stage-in = 0 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . payload execution = 16460 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . stage-out = 1 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,704 | INFO     | . log creation = 0 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,705 | INFO     | ..............................
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | 
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | job summary report
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | --------------------------------------------------
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | PanDA job id: 6238842686
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | task id: 40024049
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | errors: (none)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | pilot state: finished 
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | transexitcode: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | exeerrorcode: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | exeerrordiag: 
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | exitcode: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | exitmsg: OK
[2024-06-21 12:21:40] 2024-06-21 10:21:23,796 | INFO     | cpuconsumptiontime: 62550 s
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | nevents: 400
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | neventsw: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | pid: 2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | pgrp: 2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | corecount: 4
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | event service: False
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | sizes: {0: 2386858, 10: 2387064, 11: 2387092, 16474: 2418580, 16475: 2427562, 16478: 2427618, 16484: 2427916}
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | --------------------------------------------------
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | 
[2024-06-21 12:21:40] 2024-06-21 10:21:23,797 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 12:21:40] 2024-06-21 10:21:23,818 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | job 6238842686 has completed (purged errors)
[2024-06-21 12:21:40] 2024-06-21 10:21:23,820 | INFO     | overall cleanup function is called
[2024-06-21 12:21:40] 2024-06-21 10:21:24,828 | INFO     | --- collectZombieJob: --- 10, [2327088]
[2024-06-21 12:21:40] 2024-06-21 10:21:24,828 | INFO     | zombie collector waiting for pid 2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:24,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 12:21:40] 2024-06-21 10:21:25,836 | INFO     | collected zombie processes
[2024-06-21 12:21:40] 2024-06-21 10:21:25,836 | INFO     | will now attempt to kill all subprocesses of pid=2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:26,035 | INFO     | process IDs to be killed: [2327088] (in reverse order)
[2024-06-21 12:21:40] 2024-06-21 10:21:26,146 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 12:21:40] 2024-06-21 10:21:26,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 12:21:40] 2024-06-21 10:21:26,152 | INFO     | did not find any defunct processes belonging to 2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:26,157 | INFO     | did not find any defunct processes belonging to 2327088
[2024-06-21 12:21:40] 2024-06-21 10:21:26,158 | INFO     | ready for new job
[2024-06-21 12:21:40] 2024-06-21 10:21:26,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 12:21:40] 2024-06-21 10:21:26,159 | INFO     | *************************************
[2024-06-21 12:21:40] 2024-06-21 10:21:26,160 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 12:21:40] 2024-06-21 10:21:26,160 | INFO     | *************************************
[2024-06-21 12:21:40] 2024-06-21 10:21:26,160 | INFO     | 
[2024-06-21 12:21:40] 2024-06-21 10:21:26,162 | INFO     | architecture information:
[2024-06-21 12:21:40] 2024-06-21 10:21:26,163 | INFO     | executing command: cat /etc/os-release
[2024-06-21 12:21:40] 2024-06-21 10:21:26,178 | INFO     | cat /etc/os-release:
[2024-06-21 12:21:40] NAME="CentOS Linux"
[2024-06-21 12:21:40] VERSION="7 (Core)"
[2024-06-21 12:21:40] ID="centos"
[2024-06-21 12:21:40] ID_LIKE="rhel fedora"
[2024-06-21 12:21:40] VERSION_ID="7"
[2024-06-21 12:21:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 12:21:40] ANSI_COLOR="0;31"
[2024-06-21 12:21:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 12:21:40] HOME_URL="https://www.centos.org/"
[2024-06-21 12:21:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 12:21:40] 
[2024-06-21 12:21:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 12:21:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 12:21:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 12:21:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 12:21:40] 
[2024-06-21 12:21:40] 2024-06-21 10:21:26,178 | INFO     | *************************************
[2024-06-21 12:21:40] 2024-06-21 10:21:26,681 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 12:21:40] 2024-06-21 10:21:26,703 | INFO     | sufficient remaining disk space (661452226560 B)
[2024-06-21 12:21:40] 2024-06-21 10:21:26,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 12:21:40] 2024-06-21 10:21:26,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 12:21:40] 2024-06-21 10:21:26,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 12:21:40] 2024-06-21 10:21:27,066 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 12:21:40] 2024-06-21 10:21:27,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 12:21:40] 2024-06-21 10:21:27,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 12:21:40] 2024-06-21 10:21:27,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 12:21:40] 2024-06-21 10:21:27,228 | INFO     | aborting loop
[2024-06-21 12:21:40] 2024-06-21 10:21:27,283 | INFO     | all payload control threads have been joined
[2024-06-21 12:21:40] 2024-06-21 10:21:27,709 | INFO     | [job] retrieve thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:27,799 | INFO     | all data control threads have been joined
[2024-06-21 12:21:40] 2024-06-21 10:21:27,826 | INFO     | [payload] validate_post thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:27,860 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:27,985 | INFO     | all job control threads have been joined
[2024-06-21 12:21:40] 2024-06-21 10:21:28,026 | INFO     | [payload] failed_post thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,233 | INFO     | [job] job monitor thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,288 | INFO     | [payload] control thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,412 | INFO     | [data] copytool_in thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,420 | INFO     | [job] validate thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,434 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,625 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 12:21:40] 2024-06-21 10:21:28,709 | INFO     | [data] copytool_out thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 12:21:40] 2024-06-21 10:21:28,804 | INFO     | [data] control thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,971 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:28,990 | INFO     | [job] control thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:29,804 | INFO     | [job] queue monitor thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:32,673 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 12:21:40] 2024-06-21 10:21:34,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47638361994304)>', '<ExcThread(monitor, started 47638542268160)>']
[2024-06-21 12:21:40] 2024-06-21 10:21:35,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 12:21:40] 2024-06-21 10:21:35,106 | INFO     | [monitor] control thread has ended
[2024-06-21 12:21:40] 2024-06-21 10:21:39,281 | INFO     | all workflow threads have been joined
[2024-06-21 12:21:40] 2024-06-21 10:21:39,281 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 12:21:40] 2024-06-21 10:21:39,281 | INFO     | traces error code: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:39,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 12:21:40] 2024-06-21 10:21:39,395 [wrapper] ==== pilot stdout END ====
[2024-06-21 12:21:40] 2024-06-21 10:21:39,397 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 12:21:40] 2024-06-21 10:21:39,399 [wrapper] pilotpid: 2320057
[2024-06-21 12:21:40] 2024-06-21 10:21:39,402 [wrapper] Pilot exit status: 0
[2024-06-21 12:21:40] 2024-06-21 10:21:39,411 [wrapper] pandaids: 6238842686
[2024-06-21 12:21:40] 2024-06-21 10:21:39,495 [wrapper] cleanup supervisor_pilot 2914435 2320058
[2024-06-21 12:21:40] 2024-06-21 10:21:39,498 [wrapper] Test setup, not cleaning
[2024-06-21 12:21:40] 2024-06-21 10:21:39,500 [wrapper] ==== wrapper stdout END ====
[2024-06-21 12:21:40] 2024-06-21 10:21:39,503 [wrapper] ==== wrapper stderr END ====
[2024-06-21 12:21:40] 2024-06-21 10:21:39,508 [wrapper] apfmon messages muted
[2024-06-21 12:21:40]  *** Error codes and diagnostics ***
[2024-06-21 12:21:40]     "exeErrorCode": 0,
[2024-06-21 12:21:40]     "exeErrorDiag": "",
[2024-06-21 12:21:40]     "pilotErrorCode": 0,
[2024-06-21 12:21:40]     "pilotErrorDiag": "",
[2024-06-21 12:21:40]  *** Listing of results directory ***
[2024-06-21 12:21:40] total 871540
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:23 queuedata.json
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc    469766 Jun 20 13:24 pilot3.tar.gz
[2024-06-21 12:21:40] -rwx------ 1 boinc boinc     32308 Jun 20 13:25 runpilot2-wrapper.sh
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc       100 Jun 21 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 12:21:40] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 07:45 run_atlas
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc       105 Jun 21 07:45 job.xml
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc 609907832 Jun 21 07:46 EVNT.40024047._000007.pool.root.1
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:46 start_atlas.sh
[2024-06-21 12:21:40] drwxrwx--x 2 boinc boinc      4096 Jun 21 07:46 shared
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc    482482 Jun 21 07:46 input.tar.gz
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc      6661 Jun 21 07:46 init_data.xml
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc         0 Jun 21 07:46 boinc_lockfile
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc      2493 Jun 21 07:46 pandaJob.out
[2024-06-21 12:21:40] -rw------- 1 boinc boinc       424 Jun 21 07:46 setup.sh.local
[2024-06-21 12:21:40] -rw------- 1 boinc boinc   1024115 Jun 21 07:46 agis_schedconf.cvmfs.json
[2024-06-21 12:21:40] -rw------- 1 boinc boinc   1321251 Jun 21 07:46 cric_ddmendpoints.json
[2024-06-21 12:21:40] drwx------ 4 boinc boinc      4096 Jun 21 07:46 pilot3
[2024-06-21 12:21:40] -rw------- 1 boinc boinc 274713098 Jun 21 12:20 HITS.40024049._000120.pool.root.1
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc       532 Jun 21 12:20 boinc_task_state.xml
[2024-06-21 12:21:40] -rw------- 1 boinc boinc      1045 Jun 21 12:21 memory_monitor_summary.json
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc      8192 Jun 21 12:21 boinc_mmap_file
[2024-06-21 12:21:40] -rw------- 1 boinc boinc         0 Jun 21 12:21 agis_ddmendpoints.agis.ALL.json
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc        28 Jun 21 12:21 wrapper_checkpoint.txt
[2024-06-21 12:21:40] -rw------- 1 boinc boinc    376296 Jun 21 12:21 log.40024049._000120.job.log.tgz.1
[2024-06-21 12:21:40] -rw------- 1 boinc boinc        95 Jun 21 12:21 pilot_heartbeat.json
[2024-06-21 12:21:40] -rw------- 1 boinc boinc      7757 Jun 21 12:21 heartbeat.json
[2024-06-21 12:21:40] -rw------- 1 boinc boinc      4221 Jun 21 12:21 pilotlog.txt
[2024-06-21 12:21:40] -rw------- 1 boinc boinc   1770578 Jun 21 12:21 log.40024049._000120.job.log.1
[2024-06-21 12:21:40] -rw------- 1 boinc boinc       357 Jun 21 12:21 output.list
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc       620 Jun 21 12:21 runtime_log
[2024-06-21 12:21:40] -rw------- 1 boinc boinc   2170880 Jun 21 12:21 result.tar.gz
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc     11410 Jun 21 12:21 runtime_log.err
[2024-06-21 12:21:40] -rw------- 1 boinc boinc       658 Jun 21 12:21 MZPODms5Ue5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmi7kKDmxdkdhn.diag
[2024-06-21 12:21:40] -rw-r--r-- 1 boinc boinc     21339 Jun 21 12:21 stderr.txt
[2024-06-21 12:21:40] HITS file was successfully produced:
[2024-06-21 12:21:40] -rw------- 1 boinc boinc 274713098 Jun 21 12:20 shared/HITS.pool.root.1
[2024-06-21 12:21:40]  *** Contents of shared directory: ***
[2024-06-21 12:21:40] total 866512
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc 609907832 Jun 21 07:46 ATLAS.root_0
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:46 start_atlas.sh
[2024-06-21 12:21:40] -rw-r--r-- 2 boinc boinc    482482 Jun 21 07:46 input.tar.gz
[2024-06-21 12:21:40] -rw------- 1 boinc boinc 274713098 Jun 21 12:20 HITS.pool.root.1
[2024-06-21 12:21:40] -rw------- 1 boinc boinc   2170880 Jun 21 12:21 result.tar.gz
12:21:41 (2315602): run_atlas exited; CPU time 62276.233638
12:21:41 (2315602): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN