Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:47:56 (144658): wrapper (7.7.26015): starting
21:47:56 (144658): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 21:47:56] Arguments: --nthreads 4
[2024-06-21 21:47:56] Threads: 4
[2024-06-21 21:47:56] Checking for CVMFS
[2024-06-21 21:47:56] No cvmfs_config command found, will try listing directly
[2024-06-21 21:47:56] CVMFS is ok
[2024-06-21 21:47:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 21:47:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 21:47:56] Further information can be found at the LHC@home message board.
[2024-06-21 21:47:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 21:47:56] Checking for apptainer binary...
[2024-06-21 21:47:56] which: no apptainer in ((null))
[2024-06-21 21:47:56] apptainer is not installed, using version from CVMFS
[2024-06-21 21:47:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 21:47:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-06-21 21:47:57] apptainer works
[2024-06-21 21:47:57] Set ATHENA_PROC_NUMBER=4
[2024-06-21 21:47:57] Set ATHENA_CORE_NUMBER=4
[2024-06-21 21:47:57] Starting ATLAS job with PandaID=6238842675
[2024-06-21 21:47:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 02:18:22]  *** The last 200 lines of the pilot log: ***
[2024-06-22 02:18:22] 2024-06-22 00:18:08,645 | INFO     | -- intersect: -38148113430.91843
[2024-06-22 02:18:22] 2024-06-22 00:18:08,645 | INFO     | intersect: -38148113430.91843
[2024-06-22 02:18:22] 2024-06-22 00:18:08,646 | INFO     | chi2: 4.078885507945978
[2024-06-22 02:18:22] 2024-06-22 00:18:08,646 | INFO     | model: linear, x: [1718999312.0, 1718999373.0, 1718999434.0, 1718999495.0, 1718999556.0, 1718999617.0, 1718999678.0, 1718999739.0, 1718999800.0, 1718999861.0, 1718
[2024-06-22 02:18:22] 2024-06-22 00:18:08,647 | INFO     | sum of square deviations: 5449944045.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,649 | INFO     | sum of deviations: 125107592784.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,649 | INFO     | mean x: 1719007211.5
[2024-06-22 02:18:22] 2024-06-22 00:18:08,649 | INFO     | mean y: 2308683.5076923077
[2024-06-22 02:18:22] 2024-06-22 00:18:08,649 | INFO     | -- intersect: -39458803656.97715
[2024-06-22 02:18:22] 2024-06-22 00:18:08,649 | INFO     | intersect: -39458803656.97715
[2024-06-22 02:18:22] 2024-06-22 00:18:08,650 | INFO     | chi2: 4.079660444910464
[2024-06-22 02:18:22] 2024-06-22 00:18:08,650 | INFO     | current chi2=4.079660444910464 (change=-0.018998742744206678 %)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,650 | INFO     | right removable region: 259
[2024-06-22 02:18:22] 2024-06-22 00:18:08,650 | INFO     | model: linear, x: [1718999617.0, 1718999678.0, 1718999739.0, 1718999800.0, 1718999861.0, 1718999922.0, 1718999983.0, 1719000044.0, 1719000105.0, 1719000166.0, 1719
[2024-06-22 02:18:22] 2024-06-22 00:18:08,650 | INFO     | sum of square deviations: 5449944045.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,652 | INFO     | sum of deviations: 65609893647.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,652 | INFO     | mean x: 1719007516.5
[2024-06-22 02:18:22] 2024-06-22 00:18:08,653 | INFO     | mean y: 2339744.5
[2024-06-22 02:18:22] 2024-06-22 00:18:08,653 | INFO     | -- intersect: -20692166365.050083
[2024-06-22 02:18:22] 2024-06-22 00:18:08,653 | INFO     | intersect: -20692166365.050083
[2024-06-22 02:18:22] 2024-06-22 00:18:08,653 | INFO     | chi2: 1.579333519914319
[2024-06-22 02:18:22] 2024-06-22 00:18:08,653 | INFO     | current chi2=1.579333519914319 (change=61.280268425341745 %)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,654 | INFO     | model: linear, x: [1718999922.0, 1718999983.0, 1719000044.0, 1719000105.0, 1719000166.0, 1719000227.0, 1719000288.0, 1719000349.0, 1719000410.0, 1719000471.0, 1719
[2024-06-22 02:18:22] 2024-06-22 00:18:08,654 | INFO     | sum of square deviations: 5141528960.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,656 | INFO     | sum of deviations: 14705773493.999998
[2024-06-22 02:18:22] 2024-06-22 00:18:08,656 | INFO     | mean x: 1719007669.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,656 | INFO     | mean y: 2364916.3019607845
[2024-06-22 02:18:22] 2024-06-22 00:18:08,656 | INFO     | -- intersect: -4914331578.345989
[2024-06-22 02:18:22] 2024-06-22 00:18:08,656 | INFO     | intersect: -4914331578.345989
[2024-06-22 02:18:22] 2024-06-22 00:18:08,657 | INFO     | chi2: 0.062425884238691554
[2024-06-22 02:18:22] 2024-06-22 00:18:08,657 | INFO     | current chi2=0.062425884238691554 (change=96.04732734083437 %)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,657 | INFO     | model: linear, x: [1719000227.0, 1719000288.0, 1719000349.0, 1719000410.0, 1719000471.0, 1719000532.0, 1719000593.0, 1719000654.0, 1719000715.0, 1719000776.0, 1719
[2024-06-22 02:18:22] 2024-06-22 00:18:08,657 | INFO     | sum of square deviations: 4844974562.5
[2024-06-22 02:18:22] 2024-06-22 00:18:08,659 | INFO     | sum of deviations: 8188434064.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,659 | INFO     | mean x: 1719007821.5
[2024-06-22 02:18:22] 2024-06-22 00:18:08,660 | INFO     | mean y: 2368228.384
[2024-06-22 02:18:22] 2024-06-22 00:18:08,660 | INFO     | -- intersect: -2902906509.4445195
[2024-06-22 02:18:22] 2024-06-22 00:18:08,660 | INFO     | intersect: -2902906509.4445195
[2024-06-22 02:18:22] 2024-06-22 00:18:08,660 | INFO     | chi2: 0.0015291337401975966
[2024-06-22 02:18:22] 2024-06-22 00:18:08,660 | INFO     | current chi2=0.0015291337401975966 (change=97.55048124853016 %)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,661 | INFO     | model: linear, x: [1719000532.0, 1719000593.0, 1719000654.0, 1719000715.0, 1719000776.0, 1719000837.0, 1719000898.0, 1719000959.0, 1719001020.0, 1719001081.0, 1719
[2024-06-22 02:18:22] 2024-06-22 00:18:08,661 | INFO     | sum of square deviations: 4560048290.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | sum of deviations: 8273012272.000002
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | mean x: 1719007974.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | mean y: 2368182.6081632655
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | -- intersect: -3116321173.3257976
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | intersect: -3116321173.3257976
[2024-06-22 02:18:22] 2024-06-22 00:18:08,663 | INFO     | chi2: 0.001309779457032663
[2024-06-22 02:18:22] 2024-06-22 00:18:08,664 | INFO     | current chi2=0.001309779457032663 (change=14.345003147768374 %)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,664 | INFO     | left removable region: 40
[2024-06-22 02:18:22] 2024-06-22 00:18:08,664 | INFO     | model: linear, x: [1719001752.0, 1719001813.0, 1719001874.0, 1719001935.0, 1719001996.0, 1719002057.0, 1719002118.0, 1719002179.0, 1719002240.0, 1719002301.0, 1719
[2024-06-22 02:18:22] 2024-06-22 00:18:08,664 | INFO     | sum of square deviations: 3256879670.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,666 | INFO     | sum of deviations: 6620749619.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,666 | INFO     | mean x: 1719008401.0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,666 | INFO     | mean y: 2368461.8675799086
[2024-06-22 02:18:22] 2024-06-22 00:18:08,666 | INFO     | -- intersect: -3492118706.575628
[2024-06-22 02:18:22] 2024-06-22 00:18:08,666 | INFO     | intersect: -3492118706.575628
[2024-06-22 02:18:22] 2024-06-22 00:18:08,667 | INFO     | chi2: 0.0002573987551786863
[2024-06-22 02:18:22] 2024-06-22 00:18:08,667 | INFO     | -- intersect: -3492118706.575628
[2024-06-22 02:18:22] 2024-06-22 00:18:08,667 | INFO     | current memory leak: 2.03 B/s (using 219 data points, chi2=0.00)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | ..............................
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . Timing measurements:
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . get job = 0 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . initial setup = 1 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . payload setup = 5 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . stage-in = 0 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . payload execution = 16167 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . stage-out = 0 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | . log creation = 0 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,668 | INFO     | ..............................
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | 
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | job summary report
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | --------------------------------------------------
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | PanDA job id: 6238842675
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | task id: 40024049
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | errors: (none)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | pilot state: finished 
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | transexitcode: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | exeerrorcode: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | exeerrordiag: 
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | exitcode: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,750 | INFO     | exitmsg: OK
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | cpuconsumptiontime: 61730 s
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | nevents: 400
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | neventsw: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | pid: 156162
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | pgrp: 156162
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | corecount: 4
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | event service: False
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | sizes: {0: 2386879, 4: 2387085, 11: 2387113, 16175: 2418632, 16178: 2427614, 16180: 2427670, 16187: 2427968}
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | --------------------------------------------------
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | 
[2024-06-22 02:18:22] 2024-06-22 00:18:08,751 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | job 6238842675 has completed (purged errors)
[2024-06-22 02:18:22] 2024-06-22 00:18:08,771 | INFO     | overall cleanup function is called
[2024-06-22 02:18:22] 2024-06-22 00:18:09,778 | INFO     | --- collectZombieJob: --- 10, [156162]
[2024-06-22 02:18:22] 2024-06-22 00:18:09,778 | INFO     | zombie collector waiting for pid 156162
[2024-06-22 02:18:22] 2024-06-22 00:18:09,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 02:18:22] 2024-06-22 00:18:10,783 | INFO     | collected zombie processes
[2024-06-22 02:18:22] 2024-06-22 00:18:10,783 | INFO     | will now attempt to kill all subprocesses of pid=156162
[2024-06-22 02:18:22] 2024-06-22 00:18:10,940 | INFO     | process IDs to be killed: [156162] (in reverse order)
[2024-06-22 02:18:22] 2024-06-22 00:18:11,039 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 02:18:22] 2024-06-22 00:18:11,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 02:18:22] 2024-06-22 00:18:11,047 | INFO     | did not find any defunct processes belonging to 156162
[2024-06-22 02:18:22] 2024-06-22 00:18:11,053 | INFO     | did not find any defunct processes belonging to 156162
[2024-06-22 02:18:22] 2024-06-22 00:18:11,053 | INFO     | ready for new job
[2024-06-22 02:18:22] 2024-06-22 00:18:11,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 02:18:22] 2024-06-22 00:18:11,055 | INFO     | *************************************
[2024-06-22 02:18:22] 2024-06-22 00:18:11,055 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 02:18:22] 2024-06-22 00:18:11,055 | INFO     | *************************************
[2024-06-22 02:18:22] 2024-06-22 00:18:11,055 | INFO     | 
[2024-06-22 02:18:22] 2024-06-22 00:18:11,058 | INFO     | architecture information:
[2024-06-22 02:18:22] 2024-06-22 00:18:11,058 | INFO     | executing command: cat /etc/os-release
[2024-06-22 02:18:22] 2024-06-22 00:18:11,073 | INFO     | cat /etc/os-release:
[2024-06-22 02:18:22] NAME="CentOS Linux"
[2024-06-22 02:18:22] VERSION="7 (Core)"
[2024-06-22 02:18:22] ID="centos"
[2024-06-22 02:18:22] ID_LIKE="rhel fedora"
[2024-06-22 02:18:22] VERSION_ID="7"
[2024-06-22 02:18:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 02:18:22] ANSI_COLOR="0;31"
[2024-06-22 02:18:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 02:18:22] HOME_URL="https://www.centos.org/"
[2024-06-22 02:18:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 02:18:22] 
[2024-06-22 02:18:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 02:18:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 02:18:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 02:18:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 02:18:22] 
[2024-06-22 02:18:22] 2024-06-22 00:18:11,074 | INFO     | *************************************
[2024-06-22 02:18:22] 2024-06-22 00:18:11,576 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-06-22 02:18:22] 2024-06-22 00:18:11,594 | INFO     | sufficient remaining disk space (661122973696 B)
[2024-06-22 02:18:22] 2024-06-22 00:18:11,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 02:18:22] 2024-06-22 00:18:11,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 02:18:22] 2024-06-22 00:18:11,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:18:22] 2024-06-22 00:18:11,595 | INFO     | aborting loop
[2024-06-22 02:18:22] 2024-06-22 00:18:11,879 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 02:18:22] 2024-06-22 00:18:11,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 02:18:22] 2024-06-22 00:18:11,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 02:18:22] 2024-06-22 00:18:11,937 | INFO     | all payload control threads have been joined
[2024-06-22 02:18:22] 2024-06-22 00:18:12,387 | INFO     | all data control threads have been joined
[2024-06-22 02:18:22] 2024-06-22 00:18:12,599 | INFO     | [job] retrieve thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:12,600 | INFO     | [job] job monitor thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:12,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 02:18:22] 2024-06-22 00:18:12,729 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:12,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 02:18:22] 2024-06-22 00:18:12,931 | INFO     | [payload] validate_post thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:12,942 | INFO     | [payload] control thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,129 | INFO     | all job control threads have been joined
[2024-06-22 02:18:22] 2024-06-22 00:18:13,205 | INFO     | [data] copytool_in thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,392 | INFO     | [data] control thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,396 | INFO     | [payload] failed_post thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,445 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,506 | INFO     | [job] validate thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,697 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:13,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:18:22] 2024-06-22 00:18:13,801 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:14,134 | INFO     | [job] control thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:14,765 | INFO     | [job] queue monitor thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:14,892 | INFO     | [data] copytool_out thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:16,693 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 02:18:22] 2024-06-22 00:18:16,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46959387472960)>', '<ExcThread(monitor, started 46959775733504)>']
[2024-06-22 02:18:22] 2024-06-22 00:18:16,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 02:18:22] 2024-06-22 00:18:16,904 | INFO     | [monitor] control thread has ended
[2024-06-22 02:18:22] 2024-06-22 00:18:21,790 | INFO     | all workflow threads have been joined
[2024-06-22 02:18:22] 2024-06-22 00:18:21,790 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 02:18:22] 2024-06-22 00:18:21,790 | INFO     | traces error code: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:21,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 02:18:22] 2024-06-22 00:18:21,903 [wrapper] ==== pilot stdout END ====
[2024-06-22 02:18:22] 2024-06-22 00:18:21,905 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 02:18:22] 2024-06-22 00:18:21,908 [wrapper] pilotpid: 149032
[2024-06-22 02:18:22] 2024-06-22 00:18:21,910 [wrapper] Pilot exit status: 0
[2024-06-22 02:18:22] 2024-06-22 00:18:21,918 [wrapper] pandaids: 6238842675
[2024-06-22 02:18:22] 2024-06-22 00:18:21,985 [wrapper] cleanup supervisor_pilot  760838 149033
[2024-06-22 02:18:22] 2024-06-22 00:18:21,988 [wrapper] Test setup, not cleaning
[2024-06-22 02:18:22] 2024-06-22 00:18:21,990 [wrapper] ==== wrapper stdout END ====
[2024-06-22 02:18:22] 2024-06-22 00:18:21,992 [wrapper] ==== wrapper stderr END ====
[2024-06-22 02:18:22] 2024-06-22 00:18:21,998 [wrapper] apfmon messages muted
[2024-06-22 02:18:22]  *** Error codes and diagnostics ***
[2024-06-22 02:18:22]     "exeErrorCode": 0,
[2024-06-22 02:18:22]     "exeErrorDiag": "",
[2024-06-22 02:18:22]     "pilotErrorCode": 0,
[2024-06-22 02:18:22]     "pilotErrorDiag": "",
[2024-06-22 02:18:22]  *** Listing of results directory ***
[2024-06-22 02:18:22] total 865896
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:57 pilot3.tar.gz
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc      5654 Jun 20 13:20 queuedata.json
[2024-06-22 02:18:22] -rwx------ 1 boinc boinc     32308 Jun 20 13:22 runpilot2-wrapper.sh
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc       100 Jun 21 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 02:18:22] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 21:47 run_atlas
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc       105 Jun 21 21:47 job.xml
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc      6661 Jun 21 21:47 init_data.xml
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc 609907832 Jun 21 21:47 EVNT.40024047._000007.pool.root.1
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:47 start_atlas.sh
[2024-06-22 02:18:22] drwxrwx--x 2 boinc boinc      4096 Jun 21 21:47 shared
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc    482481 Jun 21 21:47 input.tar.gz
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc         0 Jun 21 21:47 boinc_lockfile
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc      2494 Jun 21 21:47 pandaJob.out
[2024-06-22 02:18:22] -rw------- 1 boinc boinc       424 Jun 21 21:47 setup.sh.local
[2024-06-22 02:18:22] -rw------- 1 boinc boinc   1025648 Jun 21 21:48 agis_schedconf.cvmfs.json
[2024-06-22 02:18:22] -rw------- 1 boinc boinc   1321363 Jun 21 21:48 cric_ddmendpoints.json
[2024-06-22 02:18:22] drwx------ 4 boinc boinc      4096 Jun 21 21:48 pilot3
[2024-06-22 02:18:22] -rw------- 1 boinc boinc 269275648 Jun 22 02:17 HITS.40024049._000109.pool.root.1
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc       532 Jun 22 02:17 boinc_task_state.xml
[2024-06-22 02:18:22] -rw------- 1 boinc boinc      1045 Jun 22 02:17 memory_monitor_summary.json
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc      8192 Jun 22 02:17 boinc_mmap_file
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc        28 Jun 22 02:17 wrapper_checkpoint.txt
[2024-06-22 02:18:22] -rw------- 1 boinc boinc         0 Jun 22 02:17 agis_ddmendpoints.agis.ALL.json
[2024-06-22 02:18:22] -rw------- 1 boinc boinc    351734 Jun 22 02:17 log.40024049._000109.job.log.tgz.1
[2024-06-22 02:18:22] -rw------- 1 boinc boinc        95 Jun 22 02:18 pilot_heartbeat.json
[2024-06-22 02:18:22] -rw------- 1 boinc boinc      7751 Jun 22 02:18 heartbeat.json
[2024-06-22 02:18:22] -rw------- 1 boinc boinc      4221 Jun 22 02:18 pilotlog.txt
[2024-06-22 02:18:22] -rw------- 1 boinc boinc   1624311 Jun 22 02:18 log.40024049._000109.job.log.1
[2024-06-22 02:18:22] -rw------- 1 boinc boinc       357 Jun 22 02:18 output.list
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc       620 Jun 22 02:18 runtime_log
[2024-06-22 02:18:22] -rw------- 1 boinc boinc   1996800 Jun 22 02:18 result.tar.gz
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc     11410 Jun 22 02:18 runtime_log.err
[2024-06-22 02:18:22] -rw------- 1 boinc boinc       657 Jun 22 02:18 WZwKDm62Ue5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmd7kKDmn5hiNo.diag
[2024-06-22 02:18:22] -rw-r--r-- 1 boinc boinc     21262 Jun 22 02:18 stderr.txt
[2024-06-22 02:18:22] HITS file was successfully produced:
[2024-06-22 02:18:22] -rw------- 1 boinc boinc 269275648 Jun 22 02:17 shared/HITS.pool.root.1
[2024-06-22 02:18:22]  *** Contents of shared directory: ***
[2024-06-22 02:18:22] total 861036
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc 609907832 Jun 21 21:47 ATLAS.root_0
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc     17537 Jun 21 21:47 start_atlas.sh
[2024-06-22 02:18:22] -rw-r--r-- 2 boinc boinc    482481 Jun 21 21:47 input.tar.gz
[2024-06-22 02:18:22] -rw------- 1 boinc boinc 269275648 Jun 22 02:17 HITS.pool.root.1
[2024-06-22 02:18:22] -rw------- 1 boinc boinc   1996800 Jun 22 02:18 result.tar.gz
02:18:24 (144658): run_atlas exited; CPU time 61429.679121
02:18:24 (144658): called boinc_finish(0)

</stderr_txt>
]]>

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